RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MEX3DQ86XN8 651 aaKnown RBP4.87□□□□□ -1.63
PTCD3-205ENST00000464541 PHC2Q8IXK0 858 aa4.87□□□□□ -1.63
PTCD3-205ENST00000464541 RASL10AQ92737 203 aa4.87□□□□□ -1.63
PTCD3-205ENST00000464541 DNASE1L2Q92874 299 aa4.87□□□□□ -1.63
PTCD3-205ENST00000464541 ZMAT2Q96NC0 199 aaKnown RBP4.87□□□□□ -1.63
PTCD3-205ENST00000464541 NEDD4LQ96PU5 975 aa4.87□□□□□ -1.63
PTCD3-205ENST00000464541 INTS14Q96SY0 518 aa4.87□□□□□ -1.63
PTCD3-205ENST00000464541 CSAG2Q9Y5P2 127 aa4.87□□□□□ -1.63
PTCD3-205ENST00000464541 H3BMM5 538 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 ZNF10P21506 573 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-205ENST00000464541 PKLRP30613 574 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 SOAT1P35610 550 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 CAPGP40121 348 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 PGFP49763 221 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 NDST2P52849 883 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 KLHL10Q6JEL2 608 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 CAVIN1Q6NZI2 390 aaKnown RBP4.86□□□□□ -1.63
PTCD3-205ENST00000464541 DCLRE1AQ6PJP8 1040 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 MSANTD1Q6ZTZ1 278 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 FAM131BQ86XD5 332 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 Q8N377 158 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 TEX26Q8N6G2 289 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 SPATA17Q96L03 361 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 PDRG1Q9NUG6 133 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 CTSZQ9UBR2 303 aa4.86□□□□□ -1.63
PTCD3-205ENST00000464541 NOTCH3Q9UM47 2321 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 IGHV3-20A0A0C4DH32 117 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 ILVBLA1L0T0 632 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 HPRP00739 348 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 SP9P0CG40 484 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 GOT1P17174 413 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 LBPP18428 481 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 GIFP27352 417 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 PRKCIP41743 596 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 PTGER3P43115 390 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 RBP5P82980 135 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 ENPP2Q13822 863 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 ZNF542PQ5EBM4 170 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 CDHR3Q6ZTQ4 885 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 TRMT11Q7Z4G4 463 aaKnown RBP4.85□□□□□ -1.63
PTCD3-205ENST00000464541 CROCCP3Q8IVE0 287 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 C17orf47Q8NEP4 570 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 OR5M9Q8NGP3 310 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 RPLP0P6Q8NHW5 317 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 ATP8B4Q8TF62 1192 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 CITED2Q99967 270 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-205ENST00000464541 PAPOLGQ9BWT3 736 aaKnown RBP4.85□□□□□ -1.63
PTCD3-205ENST00000464541 TUBB1Q9H4B7 451 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 MINDY3Q9H8M7 445 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 KLK11Q9UBX7 282 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 NOCTQ9UK39 431 aaKnown RBP4.85□□□□□ -1.63
PTCD3-205ENST00000464541 POMT2Q9UKY4 750 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 SATB2Q9UPW6 733 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 POMT1Q9Y6A1 747 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 NEDD4P46934 1319 aa4.85□□□□□ -1.63
PTCD3-205ENST00000464541 IGHV3-38A0A0C4DH36 116 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 YDJCA8MPS7 323 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 A8MXK9 166 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 TCP10L2B9ZVM9 353 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 E5RGE8 158 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 PGRMC2O15173 223 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 MAGEB2O15479 319 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 SCO2O43819 266 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 SNAP91O60641 907 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 IGHV3-13P01766 116 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 MT-ND2P03891 347 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 RLN1P04808 185 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 RPLP0P05388 317 aaKnown RBP4.84□□□□□ -1.63
PTCD3-205ENST00000464541 AOC1P19801 751 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 CALRP27797 417 aaKnown RBP4.84□□□□□ -1.63
PTCD3-205ENST00000464541 IER3P46695 156 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 DSCR10P59022 87 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 TSPY1Q01534 308 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 CETN1Q12798 172 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 BFSP1Q12934 665 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 KIAA0141Q14154 515 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-205ENST00000464541 UPP1Q16831 310 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 SPANXN4Q5MJ08 99 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 TCEAL6Q6IPX3 200 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ZNF770Q6IQ21 691 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-205ENST00000464541 GLRX5Q86SX6 157 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ERC1Q8IUD2 1116 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 CREBRFQ8IUR6 639 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 TMEM99Q8N816 258 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 AMER3Q8N944 861 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 OR9Q2Q8NGE9 314 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-205ENST00000464541 CORO2AQ92828 525 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 PCDHB18PQ96TA0 734 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 PSMB7Q99436 277 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ATF6BQ99941 703 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 C5orf66Q9H5L9 145 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ZCCHC17Q9NP64 241 aaKnown RBP4.84□□□□□ -1.63
PTCD3-205ENST00000464541 BAIAP2L1Q9UHR4 511 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ITGA11Q9UKX5 1188 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 NSG2Q9Y328 171 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 SMAD5-AS1Q9Y6J3 95 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 ZHX2Q9Y6X8 837 aa4.84□□□□□ -1.63
PTCD3-205ENST00000464541 SPATA31D1Q6ZQQ2 1576 aa4.83□□□□□ -1.64
PTCD3-205ENST00000464541 SHISA7A6NL88 538 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms