RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NLRP1Q9C000 1473 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 LAMC3Q9Y6N6 1575 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ITSN2Q9NZM3 1697 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 PFASO15067 1338 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CNTNAP2Q9UHC6 1331 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 DAPK1P53355 1430 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 UHRF1BP1Q6BDS2 1440 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ARHGEF12Q9NZN5 1544 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 TRPM1Q7Z4N2 1603 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 MYO5CQ9NQX4 1742 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 TMEM129A0AVI4 362 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 MACROD2A1Z1Q3 448 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 SRRM3A6NNA2 597 aaPredicted RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 F8WDY8 70 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 NPIPA3F8WFD2 350 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 H3BMM5 538 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 UBXN8O00124 270 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 SLC22A2O15244 555 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 SSX5O60225 188 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 GAS8O95995 478 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 GLUD1P00367 558 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ALPLP05186 524 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 PRSS2P07478 247 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CHRNGP07510 517 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 NUDT17P0C025 328 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CDH1P12830 882 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 F3P13726 295 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ALDH1B1P30837 517 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CCKBRP32239 447 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 DUTP33316 252 aaKnown RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 PEX19P40855 299 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 GLUD2P49448 558 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 NR0B1P51843 470 aaKnown RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 CNN1P51911 297 aaKnown RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 GBX2P52951 348 aaPredicted RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 HUNKP57058 714 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 LINC00205P59089 165 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 TRAP1Q12931 704 aaKnown RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 DLG1Q12959 904 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 SCGB2A2Q13296 93 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 HERC4Q5GLZ8 1057 aaPredicted RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 KIAA1161Q6NSJ0 714 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CTR9Q6PD62 1173 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CENPQQ7L2Z9 268 aaPredicted RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 LPCAT2Q7L5N7 544 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 TAF8Q7Z7C8 310 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 DCP1BQ8IZD4 617 aaKnown RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 EID3Q8N140 333 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 CLIP4Q8N3C7 705 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ZNF441Q8N8Z8 693 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 OR4A16Q8NH70 328 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 OLIG1Q8TAK6 271 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 GRHL3Q8TE85 626 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ARHGAP45Q92619 1136 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 GGHQ92820 318 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 LYZL4Q96KX0 146 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 MARK4Q96L34 752 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 TSSK2Q96PF2 358 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 MAP3K3Q99759 626 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 PRMT1Q99873 361 aaKnown RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 POLR3CQ9BUI4 534 aaPredicted RBP2.72□□□□□ -1.97
HPS3-203ENST00000460822 CARD6Q9BX69 1037 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 PANK2Q9BZ23 570 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 UBQLN3Q9H347 655 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 TCF7L2Q9NQB0 619 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 ZNF580Q9UK33 172 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 PARD3Q8TEW0 1356 aa2.72□□□□□ -1.97
HPS3-203ENST00000460822 WDR62O43379 1518 aa2.71□□□□□ -1.97
HPS3-203ENST00000460822 EPRSP07814 1512 aaKnown RBP2.71□□□□□ -1.97
HPS3-203ENST00000460822 CDK13Q14004 1512 aaKnown RBP2.71□□□□□ -1.97
HPS3-203ENST00000460822 CLASP1Q7Z460 1538 aa2.71□□□□□ -1.97
HPS3-203ENST00000460822 SYNRGQ9UMZ2 1314 aa2.71□□□□□ -1.97
HPS3-203ENST00000460822 POLA1P09884 1462 aaPredicted RBP2.71□□□□□ -1.98
HPS3-203ENST00000460822 RAD54L2Q9Y4B4 1467 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 DENND3A2RUS2 1198 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 ANKRD61A6NGH8 418 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 SLC28A1O00337 649 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 TEX28O15482 410 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 SCO2O43819 266 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 GMNNO75496 209 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 SCGB2A1O75556 95 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 PRAMEF12O95522 483 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 CXCL10P02778 98 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 PGK2P07205 417 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 HOXC6P09630 235 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 T-ENOLP0DO92 83 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 ZNF12P17014 697 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 ZNF23P17027 643 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 FUT1P19526 365 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 AKT2P31751 481 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 SOX6P35712 828 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 CDKN2AP42771 156 aaKnown RBP2.71□□□□□ -1.98
HPS3-203ENST00000460822 SULT1E1P49888 294 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 FUT6P51993 359 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 PGGT1BP53609 377 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 CDH11P55287 796 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 B3GALT5-AS1P59052 145 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 CETN1Q12798 172 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 TRAF2Q12933 501 aa2.71□□□□□ -1.98
HPS3-203ENST00000460822 SPP2Q13103 211 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms