RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 HOXC12P31275 282 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 TRHRP34981 398 aaPredicted RBP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 PTPN7P35236 360 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 CCNFP41002 786 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 HLCSP50747 726 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 DGKQP52824 942 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 SESN2P58004 480 aaPredicted RBP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 AP2B1P63010 937 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 PRAMEP78395 509 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 MEF2AQ02078 507 aaPredicted RBP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 CDH17Q12864 832 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 PTK6Q13882 451 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 ANKRD20A4Q4UJ75 823 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 XKR6Q5GH73 641 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 TMEM211Q6ICI0 200 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 C11orf63Q6NUN7 778 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 PAMR1Q6UXH9 720 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 CLEC9AQ6UXN8 241 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 SEM1Q6ZVN7 128 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 TAOK1Q7L7X3 1001 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 WDR53Q7Z5U6 358 aaPredicted RBP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 BIVMQ86UB2 503 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 REXO1L1PQ8IX06 675 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 RELL2Q8NC24 303 aaPredicted RBP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 NAXEQ8NCW5 288 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 SLC35B2Q8TB61 432 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 LPGAT1Q92604 370 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 TM4SF19Q96DZ7 209 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 MFSD3Q96ES6 412 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 RMND5BQ96G75 393 aaPredicted RBP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 ALPK1Q96QP1 1244 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 AICDAQ9GZX7 198 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 TREX1Q9NSU2 369 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 INTUQ9ULD6 942 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 CRYL1Q9Y2S2 319 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 MED16Q9Y2X0 877 aa6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.75□□□□□ -1.33
AC007349.3-201ENST00000415356 TRBV11-1A0A0K0K1C0 115 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 SAGE2PA6NJ88 616 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 A6NNC1 897 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 USP27XA6NNY8 438 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 MAGEB17A8MXT2 336 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 CHST10O43529 356 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 PRMT3O60678 531 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 NDUFS3O75489 264 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 FHP07954 510 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 FOSL1P15407 271 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ENDOUP21128 410 aaKnown RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 RPS3P23396 243 aaKnown RBP eCLIP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ACVR2AP27037 513 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ADSLP30566 484 aaPredicted RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ZFP36L2P47974 494 aaKnown RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 AGTR2P50052 363 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 TAS2R50P59544 299 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 COPS2P61201 443 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 PPIAP62937 165 aaKnown RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 KLF1Q13351 362 aaPredicted RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 POU4F3Q15319 338 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 NDUFA9Q16795 377 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ZNF750Q32MQ0 723 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ARHGAP11AQ6P4F7 1023 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 PPP1R21Q6ZMI0 780 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 CYHR1Q6ZMK1 362 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 CXXC5Q7LFL8 322 aaKnown RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 VSTM4Q8IW00 320 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 CLYBLQ8N0X4 340 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 LGI4Q8N135 537 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 CYP4Z2PQ8N1L4 340 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 AFAP1L2Q8N4X5 818 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 RAB42Q8N4Z0 105 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 HORMAD2Q8N7B1 307 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 APCDD1LQ8NCL9 501 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ZNF740Q8NDX6 193 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 TMEM52Q8NDY8 209 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 GSDMBQ8TAX9 411 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 TMEM125Q96AQ2 219 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 IQCDQ96DY2 449 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 C18orf12Q96KH6 178 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 FOPNLQ96NB1 174 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 PANX3Q96QZ0 392 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 TSSK1BQ9BXA7 367 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ATG10Q9H0Y0 220 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 SEMA4BQ9NPR2 832 aaPredicted RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 RIMKLBQ9ULI2 386 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 EFR3BQ9Y2G0 817 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 KLF13Q9Y2Y9 288 aaPredicted RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 REXO2Q9Y3B8 237 aaKnown RBP6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 PCDHA13Q9Y5I0 950 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 CLDN16Q9Y5I7 305 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 ALPK2Q86TB3 2170 aa6.74□□□□□ -1.33
AC007349.3-201ENST00000415356 TCRBV7S3A2A0A539 114 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 GRID2IPA4D2P6 1211 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 INAFM1C9JVW0 142 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 PHF2O75151 1096 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 ITGA10O75578 1167 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 OR6B1O95007 311 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 TJP3O95049 919 aa6.73□□□□□ -1.33
AC007349.3-201ENST00000415356 MBD3O95983 291 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms