RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 HYAL2Q12891 473 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 CUL3Q13618 768 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 UBAP2LQ14157 1087 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 DEPDC1Q5TB30 811 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 HES3Q5TGS1 186 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 FAM91A1Q658Y4 838 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 TRPV3Q8NET8 790 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 CHTF18Q8WVB6 975 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 ERP27Q96DN0 273 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 TM4SF19Q96DZ7 209 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 NUDT22Q9BRQ3 303 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 C1orf50Q9BV19 199 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 CCDC106Q9BWC9 280 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 MRPL1Q9BYD6 325 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 AICDAQ9GZX7 198 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 LRRN3Q9H3W5 708 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 AIG1Q9NVV5 245 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 ASIC5Q9NY37 505 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 ARMCX1Q9P291 453 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 DKK4Q9UBT3 224 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 RAXQ9Y2V3 346 aa16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 COPG1Q9Y678 874 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-205ENST00000397406 A0A0J9YVX5 310 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 CCT8L1PA6NM43 557 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 RPLP0P05388 317 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 HNRNPH1P31943 449 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 TARDBPQ13148 414 aaKnown RBP eCLIP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 GSTA3Q16772 222 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 ADPRMQ3LIE5 342 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 KHDRBS2Q5VWX1 349 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 FRMPD2BQ6IN97 320 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 TMPRSS9Q7Z410 1059 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 PRSS42Q7Z5A4 293 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 METTL4Q8N3J2 472 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 DNAJC22Q8N4W6 341 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 NT5CQ8TCD5 201 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 TCTN2Q96GX1 697 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 BRINP2Q9C0B6 783 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 CHRNA10Q9GZZ6 450 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 NMRK1Q9NWW6 199 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 SIRT5Q9NXA8 310 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 NOP53Q9NZM5 478 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 KLHL3Q9UH77 587 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 ATXN7L1Q9ULK2 861 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 TMED5Q9Y3A6 229 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 POLR3HQ9Y535 204 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 GPR45Q9Y5Y3 372 aa16.15■□□□□ 0.18
TSPAN4-205ENST00000397406 LRIT2A6NDA9 550 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 CAPN14A8MX76 684 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 EBAG9O00559 213 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 NDUFS4O43181 175 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 HCRTR1O43613 425 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 SEMA3DO95025 777 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 ZBTB11O95625 1053 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 CPNE6O95741 557 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 STATHP02808 62 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 ACPPP15309 386 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 GABRA4P48169 554 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 MRPL19P49406 292 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 RAE1P78406 368 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 IRX1P78414 480 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 MAD2L1Q13257 205 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 SQLEQ14534 574 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 SPIN4Q56A73 249 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 CACHD1Q5VU97 1274 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 IL23RQ5VWK5 629 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 TMEM71Q6P5X7 295 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 ZNF574Q6ZN55 896 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 ASPGQ86U10 573 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 C1orf52Q8N6N3 182 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 F2RL3Q96RI0 385 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 SLC6A16Q9GZN6 736 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 ZMYND15Q9H091 742 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 PRM3Q9NNZ6 103 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 APC2O95996 2303 aa16.14■□□□□ 0.17
TSPAN4-205ENST00000397406 ZFYVE26Q68DK2 2539 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 LOC105369274A0A096LPK9 316 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 LOC102723532A0A0G2JNH3 316 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 H0YGG7 62 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 SAP18O00422 153 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 PLPP1O14494 284 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 P2RX6O15547 441 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 RASSF9O75901 435 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 SERPIND1P05546 499 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 GP1BAP07359 652 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 IDO1P14902 403 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 ARF3P61204 181 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 ACSM2AQ08AH3 577 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 KLF10Q13118 480 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 PWP1Q13610 501 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 ACSM2BQ68CK6 577 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 NOXRED1Q6NXP6 359 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 TREML1Q86YW5 311 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 OR4N4Q8N0Y3 316 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 SLC13A3Q8WWT9 602 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 MACROD1Q9BQ69 325 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 ZNF717Q9BY31 904 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 KLHL31Q9H511 634 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 SDR39U1Q9NRG7 319 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 PDP2Q9P2J9 529 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms