RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ATL1Q8WXF7 558 aa13.02□□□□□ -0.33
SEC13-205ENST00000397101 DLG3Q92796 817 aa13.02□□□□□ -0.33
SEC13-205ENST00000397101 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
SEC13-205ENST00000397101 MECRQ9BV79 373 aa13.02□□□□□ -0.33
SEC13-205ENST00000397101 IFT80Q9P2H3 777 aaPredicted RBP13.02□□□□□ -0.33
SEC13-205ENST00000397101 ANGPTL3Q9Y5C1 460 aa13.02□□□□□ -0.33
SEC13-205ENST00000397101 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
SEC13-205ENST00000397101 DNHD1Q96M86 4753 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 KRT87PA6NCN2 255 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 A8MT66 165 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 G3V2L1 256 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 BTN3A3O00478 584 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 CCNT2O60583 730 aaKnown RBP13.01□□□□□ -0.33
SEC13-205ENST00000397101 TRIM13O60858 407 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 ONECUT2O95948 504 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 SBK3P0C264 359 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 MMP11P24347 488 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 ETV4P43268 484 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 GABRA4P48169 554 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 ALDH18A1P54886 795 aaKnown RBP13.01□□□□□ -0.33
SEC13-205ENST00000397101 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
SEC13-205ENST00000397101 CDKL1Q00532 357 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 PCLAFQ15004 111 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 PPP1R3AQ16821 1122 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 FBXO48Q5FWF7 155 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 PRAMEF13Q5VWM6 474 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 TLDC1Q6P9B6 456 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 FJX1Q86VR8 437 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 C2orf73Q8N5S3 287 aaPredicted RBP13.01□□□□□ -0.33
SEC13-205ENST00000397101 BCORP1Q8N888 145 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 FBXO15Q8NCQ5 510 aaPredicted RBP13.01□□□□□ -0.33
SEC13-205ENST00000397101 ATG10Q9H0Y0 220 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 EPS8L2Q9H6S3 715 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 ZGRF1Q86YA3 2104 aa13.01□□□□□ -0.33
SEC13-205ENST00000397101 FER1L5A0AVI2 2057 aa13□□□□□ -0.33
SEC13-205ENST00000397101 MDC1Q14676 2089 aaKnown RBP13□□□□□ -0.33
SEC13-205ENST00000397101 TARM1B6A8C7 271 aa13□□□□□ -0.33
SEC13-205ENST00000397101 BIRC5O15392 142 aa13□□□□□ -0.33
SEC13-205ENST00000397101 CNOT3O75175 753 aaKnown RBP13□□□□□ -0.33
SEC13-205ENST00000397101 OR2B3O76000 313 aa13□□□□□ -0.33
SEC13-205ENST00000397101 SUPT7LO94864 414 aa13□□□□□ -0.33
SEC13-205ENST00000397101 ALBP02768 609 aa13□□□□□ -0.33
SEC13-205ENST00000397101 EEF1DP29692 281 aaKnown RBP13□□□□□ -0.33
SEC13-205ENST00000397101 HSD17B2P37059 387 aa13□□□□□ -0.33
SEC13-205ENST00000397101 ARL1P40616 181 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 HSPA7P48741 367 aa13□□□□□ -0.33
SEC13-205ENST00000397101 HNMTP50135 292 aa13□□□□□ -0.33
SEC13-205ENST00000397101 PRKAA2P54646 552 aa13□□□□□ -0.33
SEC13-205ENST00000397101 CDC16Q13042 620 aa13□□□□□ -0.33
SEC13-205ENST00000397101 CHI3L2Q15782 390 aa13□□□□□ -0.33
SEC13-205ENST00000397101 ZNF630Q2M218 657 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 CDKL4Q5MAI5 379 aa13□□□□□ -0.33
SEC13-205ENST00000397101 THEMIS2Q5TEJ8 643 aa13□□□□□ -0.33
SEC13-205ENST00000397101 LIPMQ5VYY2 423 aa13□□□□□ -0.33
SEC13-205ENST00000397101 ZNF324BQ6AW86 544 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 AGTRAPQ6RW13 159 aa13□□□□□ -0.33
SEC13-205ENST00000397101 SPESP1Q6UW49 350 aa13□□□□□ -0.33
SEC13-205ENST00000397101 FAM180AQ6UWF9 173 aa13□□□□□ -0.33
SEC13-205ENST00000397101 BNC2Q6ZN30 1099 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 AMIGO1Q86WK6 493 aa13□□□□□ -0.33
SEC13-205ENST00000397101 TMEM151AQ8N4L1 468 aa13□□□□□ -0.33
SEC13-205ENST00000397101 C19orf47Q8N9M1 422 aaKnown RBP13□□□□□ -0.33
SEC13-205ENST00000397101 SNX31Q8N9S9 440 aa13□□□□□ -0.33
SEC13-205ENST00000397101 PDPRQ8NCN5 879 aa13□□□□□ -0.33
SEC13-205ENST00000397101 OR52E1Q8NGJ3 308 aa13□□□□□ -0.33
SEC13-205ENST00000397101 LRRC8CQ8TDW0 803 aa13□□□□□ -0.33
SEC13-205ENST00000397101 ITLN2Q8WWU7 325 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 N4BP2L2Q92802 583 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 ESAMQ96AP7 390 aa13□□□□□ -0.33
SEC13-205ENST00000397101 FKBP10Q96AY3 582 aa13□□□□□ -0.33
SEC13-205ENST00000397101 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
SEC13-205ENST00000397101 FBXL8Q96CD0 374 aa13□□□□□ -0.33
SEC13-205ENST00000397101 IL17FQ96PD4 163 aa13□□□□□ -0.33
SEC13-205ENST00000397101 RAB11FIP5Q9BXF6 653 aa13□□□□□ -0.33
SEC13-205ENST00000397101 PRM3Q9NNZ6 103 aa13□□□□□ -0.33
SEC13-205ENST00000397101 SLC6A20Q9NP91 592 aa13□□□□□ -0.33
SEC13-205ENST00000397101 OLAHQ9NV23 265 aa13□□□□□ -0.33
SEC13-205ENST00000397101 OXSMQ9NWU1 459 aa13□□□□□ -0.33
SEC13-205ENST00000397101 ACTR10Q9NZ32 417 aa13□□□□□ -0.33
SEC13-205ENST00000397101 SPATA7Q9P0W8 599 aa13□□□□□ -0.33
SEC13-205ENST00000397101 STOX2Q9P2F5 926 aaPredicted RBP13□□□□□ -0.33
SEC13-205ENST00000397101 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
SEC13-205ENST00000397101 TACC2O95359 2948 aa13□□□□□ -0.33
SEC13-205ENST00000397101 STX16-NPEPL1H3BU86 382 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 MYO1CO00159 1063 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 STX16O14662 325 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 PCDH17O14917 1159 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 ZSCAN9O15535 394 aaPredicted RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 JRKO75564 520 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 WDR47O94967 919 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 SLC16A8O95907 504 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 MTHFD2P13995 350 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 BGNP21810 368 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 PNLIPRP1P54315 467 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 NAGLUP54802 743 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 GYS2P54840 703 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 NAE1Q13564 534 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms