RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 HNF1BP35680 557 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ATP5C1P36542 298 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CNTN6Q9UQ52 1028 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 MYLKQ15746 1914 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 GRXCR2A6NFK2 248 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 H7C417 338 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 UBXN7O94888 489 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SCGB1D1O95968 90 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RPL17P18621 184 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 FPR1P21462 350 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CHATP28329 748 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SIGIRRQ6IA17 410 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM129CQ86XR2 697 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF676Q8N7Q3 588 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PTCHD1Q96NR3 888 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 KCNC2Q96PR1 638 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 MROQ9BYG7 248 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ERVMER34-1Q9H9K5 563 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 NTN4Q9HB63 628 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 EIF3FO00303 357 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CNTN5O94779 1100 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC6A3Q01959 620 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 GALNT1Q10472 559 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF460Q14592 562 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CBX2Q14781 532 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 EIF4HQ15056 248 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CLEC12AQ5QGZ9 265 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 HGSNATQ68CP4 663 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SYNE4Q8N205 404 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM110BQ8TC76 370 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 NINJ1Q92982 152 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SAMD10Q9BYL1 202 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ADAM7Q9H2U9 754 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 COPS7AQ9UBW8 275 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CDC14AQ9UNH5 594 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 MRPS33Q9Y291 106 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PRELID3BQ9Y3B1 194 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CEMIPQ8WUJ3 1361 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 H3BRB1 525 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 HNRNPA0Q13151 305 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RIN1Q13671 783 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 HACD2Q6Y1H2 254 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF619Q8N2I2 560 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PROKR2Q8NFJ6 384 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 NEIL3Q8TAT5 605 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 COQ3Q9NZJ6 369 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 CALML5Q9NZT1 146 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PI4KAP42356 2102 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 BUD23O43709 281 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF821O75541 412 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 JUPP14923 745 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 HSPB3Q12988 150 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PTCHD3Q3KNS1 767 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 EIPR1Q53HC9 387 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RBM23Q86U06 439 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 TSPYL5Q86VY4 417 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 OR51D1Q8NGF3 324 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PCDHB18PQ96TA0 734 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ABCG5Q9H222 651 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A0D9SG52 128 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 TBC1D3BA6NDS4 549 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 DFFBO76075 338 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RPP14O95059 124 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PRAMEF12O95522 483 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 PAX6P26367 422 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZACNQ401N2 412 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RFPL4BQ6ZWI9 263 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF34Q8IZ26 560 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 TAS1R2Q8TE23 839 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 TAPBPLQ9BX59 468 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RBCK1Q9BYM8 510 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 MFSD1Q9H3U5 465 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 FZD3Q9NPG1 666 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 XRN1Q8IZH2 1706 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 WASHC1A8K0Z3 465 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MAGEB17A8MXT2 336 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CSF2P04141 144 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 GKP32189 559 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 PRR5P85299 388 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 WASH2PQ6VEQ5 465 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SIAH1Q8IUQ4 282 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 OR2T35Q8NGX2 323 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 DCAKDQ8WVC6 231 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SMPDL3BQ92485 455 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 RADILQ96JH8 1075 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 NPLQ9BXD5 320 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TIGARQ9NQ88 270 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ADAMTS6Q9UKP5 1117 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ATAD5Q96QE3 1844 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC37A4O43826 429 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CAPN15O75808 1086 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 RPLP2P05387 115 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 GNRHRP30968 328 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ARHGAP11AQ6P4F7 1023 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms