RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SLC29A3Q9BZD2 475 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CHST8Q9H2A9 424 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 BPIFA1Q9NP55 256 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 WWOXQ9NZC7 414 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SH3BP4Q9P0V3 963 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CLEC2DQ9UHP7 191 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 TRPM7Q96QT4 1865 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SMIM35A0A1B0GVV1 85 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 WASHC1A8K0Z3 465 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MAGEB17A8MXT2 336 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PROM1O43490 865 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 GCM2O75603 506 aaPredicted RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 SLC22A5O76082 557 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 HLA-DQB1P01920 261 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 CLEC2LP0C7M8 214 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MSL3P1P0C860 447 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 DPEP1P16444 411 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PSMA1P25786 263 aaKnown RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 AQP1P29972 269 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 ETV3P41162 512 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 BRCC3P46736 316 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MAN2A2P49641 1150 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MAB21L1Q13394 359 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 DSC3Q14574 896 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PTGES3Q15185 160 aaKnown RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 KCTD20Q7Z5Y7 419 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 DDX53Q86TM3 631 aaKnown RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 APOBEC3FQ8IUX4 373 aaKnown RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 UBTD2Q8WUN7 234 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 AIFM2Q9BRQ8 373 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 DOHHQ9BU89 302 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 TRIM45Q9H8W5 580 aaPredicted RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 ELF5Q9UKW6 265 aaPredicted RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PLD2O14939 933 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MYL12BO14950 172 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 TPST2O60704 377 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 TSPAN9O75954 239 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 ARHGEF15O94989 841 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 IGHA2P01877 340 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MYL12AP19105 171 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 EVI2BP34910 448 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 CDH12P55289 794 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 TBX4P57082 545 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 CDC42P60953 191 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 HNRNPA0Q13151 305 aaKnown RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PTPRRQ15256 657 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 TOR1AIP2Q8NFQ8 470 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 SPPL2AQ8TCT8 520 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 ZBED6CLQ96FA7 236 aaPredicted RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 MGME1Q9BQP7 344 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 SPATA9Q9BWV2 254 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 APOL5Q9BWW9 433 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 SLC25A19Q9HC21 320 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 RBFOX1Q9NWB1 397 aaKnown RBP12.3□□□□□ -0.44
CCDC60-201ENST00000327554 CLCA3PQ9Y6N3 262 aa12.3□□□□□ -0.44
CCDC60-201ENST00000327554 PLXNA3P51805 1871 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 HBQ1P09105 142 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ZNF250P15622 560 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 EPORP19235 508 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ENPP1P22413 925 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 RPS3P23396 243 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC60-201ENST00000327554 CLDN20P56880 219 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 SPIBQ01892 262 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 SPHARQ15513 63 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 GPR162Q16538 588 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 UGT8Q16880 541 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ZNF782Q6ZMW2 699 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-201ENST00000327554 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 CLECL1Q8IZS7 167 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 FAM9CQ8IZT9 166 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ATP6V1C2Q8NEY4 427 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 LKAAEAR1Q8TD35 194 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 APIPQ96GX9 242 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 GPR137Q96N19 417 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ZSCAN5AQ9BUG6 496 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 KATNBL1Q9H079 304 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 FTSJ1Q9UET6 329 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 LTBP3Q9NS15 1303 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 MBLAC1A4D2B0 266 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-201ENST00000327554 PRAMEF25A6NGN4 478 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 A8MVJ9 347 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 YY2O15391 372 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 NBNO60934 754 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 IL1AP01583 271 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms