RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 FAM129BQ96TA1 746 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 ZNF334Q9HCZ1 680 aaPredicted RBP12.73□□□□□ -0.37
PGBD1-201ENST00000259883 TMEM161AQ9NX61 479 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 ZDHHC3Q9NYG2 299 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 PLXNA4Q9HCM2 1894 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
PGBD1-201ENST00000259883 APOA1P02647 267 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 CYP2A7P20853 494 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 PDHA2P29803 388 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 RGNQ15493 299 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 C10orf62Q5T681 223 aaPredicted RBP12.73□□□□□ -0.37
PGBD1-201ENST00000259883 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 IQCF1Q8N6M8 205 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 DTX3Q8N9I9 347 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 HUS1BQ8NHY5 278 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 UBASH3BQ8TF42 649 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 RAB8BQ92930 207 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 MYDGFQ969H8 173 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 SLC35A5Q9BS91 424 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 IFT52Q9Y366 437 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 PRKAB1Q9Y478 270 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 UGT2A1Q9Y4X1 527 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 PCDHGB3Q9Y5G1 929 aa12.73□□□□□ -0.37
PGBD1-201ENST00000259883 CLCA1A8K7I4 914 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TAF4O00268 1085 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 IDH3BO43837 385 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 GABRR2P28476 465 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 CASP3P42574 277 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TUFMP49411 452 aaKnown RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ITGA1P56199 1179 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PFN3P60673 137 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 AP1S1P61966 158 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 MACC1Q6ZN28 852 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 SERPINA11Q86U17 422 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 HJURPQ8NCD3 748 aaPredicted RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 C11orf65Q8NCR3 313 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ZNF740Q8NDX6 193 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PLD4Q96BZ4 506 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 C7orf34Q96L11 122 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TRNT1Q96Q11 434 aaKnown RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TOR4AQ9NXH8 423 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ZNF226Q9NYT6 803 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PSORS1C1Q9UIG5 152 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PLAGL1Q9UM63 463 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PCDHGA3Q9Y5H0 932 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 RTCAO00442 366 aaKnown RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ZW10O43264 779 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TSPAN6O43657 245 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 KRT75O95678 551 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 CNR2P34972 360 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 RGS6P49758 472 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 OR2B6P58173 313 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ARMC4Q5T2S8 1044 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 USP43Q70EL4 1123 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 WDR53Q7Z5U6 358 aaPredicted RBP12.72□□□□□ -0.37
PGBD1-201ENST00000259883 RNF180Q86T96 592 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 MGLLQ99685 303 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 CLSTN3Q9BQT9 956 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 RNF186Q9NXI6 227 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TBC1D14Q9P2M4 693 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 TMPRSS11EQ9UL52 423 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 MAN2B2Q9Y2E5 1009 aa12.72□□□□□ -0.37
PGBD1-201ENST00000259883 PRAMEF33A0A0G2JMD5 474 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 ARHGEF33A8MVX0 844 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 H7C4K7 107 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 PRAMEF10O60809 474 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 SNX4O95219 450 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 TNNI3P19429 210 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 CTSCP53634 463 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 CSTF3Q12996 717 aaKnown RBP12.71□□□□□ -0.37
PGBD1-201ENST00000259883 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.71□□□□□ -0.37
PGBD1-201ENST00000259883 DEF8Q6ZN54 512 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 PLPP6Q8IY26 295 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 CAMKK1Q8N5S9 505 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 VPS37AQ8NEZ2 397 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 GPR151Q8TDV0 419 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 CSGALNACT1Q8TDX6 532 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 MMP27Q9H306 513 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 SH2B3Q9UQQ2 575 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 ITM2BQ9Y287 266 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 NRG2O14511 850 aaPredicted RBP12.71□□□□□ -0.37
PGBD1-201ENST00000259883 KMOO15229 486 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 SCN2BO60939 215 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 NME6O75414 186 aaPredicted RBP12.71□□□□□ -0.37
PGBD1-201ENST00000259883 CDK1P06493 297 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 BMPR1AP36894 532 aa12.71□□□□□ -0.37
PGBD1-201ENST00000259883 CAV3P56539 151 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms