RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Pnpla1Q3V1D5 599 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm5800Q497L3 186 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 XiapQ60989 496 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Usp7Q6A4J8 1103 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Klhl26Q8BGY4 606 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Flrt2Q8BLU0 660 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 RhbgQ8BUX5 455 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Actr8Q8R2S9 624 aaKnown RBP6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 RergQ8R367 199 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 McmbpQ8R3C0 642 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Yipf2Q99LP8 312 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm16286Q9CQX6 220 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Clca1Q9D7Z6 913 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrpl46Q9EQI8 283 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Lima1Q9ERG0 753 aaKnown RBP6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Dpp6Q9Z218 804 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fem1aaQ9Z2G1 654 aa6.65□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Zfp352A2AML7 551 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Itih4A6X935 942 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm17067E9Q6S4 354 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr1513L7N457 313 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Btnl2O70355 454 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pdk4O70571 412 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Alas2P08680 587 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 FesP16879 822 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 DctP29812 517 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cct3P80318 545 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm1123Q1RME4 390 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Q3U7U4 132 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Taar7fQ5QD08 358 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vsx2Q61412 361 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hist2h2acQ64523 129 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hist2h2aa1Q6GSS7 130 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Sox11Q7M6Y2 395 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Eme1Q8BJW7 570 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Atp6v1hQ8BVE3 483 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 4932414N04RikQ8CEQ9 752 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Stx5Q8K1E0 355 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrpl47Q8K2Y7 252 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 RorbQ8R1B8 470 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slco1a5Q91YY5 670 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Krt81Q9ERE2 481 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 H2afyQ9QZQ8 372 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Khdrbs3Q9R226 346 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Akirin2B1AXD8 201 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tex28B1AYN9 409 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mptx2D3YYJ7 219 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 4930579F01RikE9Q3L6 325 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mtnd4P03911 459 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 C2P21180 760 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 TesP47226 423 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Copz1P61924 177 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tgif1P70284 272 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Creb1Q01147 341 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Padi2Q08642 673 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Grid2ipQ0QWG9 1203 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fezf1Q0VDQ9 475 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hk3Q3TRM8 922 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Phf12Q5SPL2 1003 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ifit3Q64345 403 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kctd12Q6WVG3 327 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Serpina3fQ80X76 445 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Skida1Q80YR3 822 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cpne3Q8BT60 533 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slco6c1Q8C0X7 706 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fmo2Q8K2I3 535 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 BroxQ8K2Q7 411 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Lin28aQ8K3Y3 209 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pcolce2Q8R4W6 414 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr353Q8VGK0 311 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tmem150aQ91WN2 271 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 TardbpQ921F2 414 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrpl37Q921S7 423 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc25a36Q922G0 311 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrm1Q99J25 320 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Trim33Q99PP7 1142 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Arl8bQ9CQW2 186 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Armc1Q9D7A8 282 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 ApmapQ9D7N9 415 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Aqp5Q9WTY4 265 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 LipaQ9Z0M5 397 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Plxnb1Q8CJH3 2119 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Klhl4B1AZR0 717 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Sult2a6B2RVI8 285 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kpna7C0LLJ0 499 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tex16F6WNY1 1150 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ephb6O08644 1014 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Rplp0P14869 317 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cdh2P15116 906 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Rab21P35282 222 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 P2ry2P35383 373 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 AgrpP56473 131 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Casp3P70677 277 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fam129aQ3UW53 926 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Defa17Q64016 82 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pum1Q80U78 1189 aaKnown RBP6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mup21Q80YX8 181 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Zfand1Q8BFR6 268 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cers6Q8C172 384 aa6.64□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Teddm1bQ8CC62 306 aa6.64□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms