RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Med20Q9R0X0 212 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Cdh13Q9WTR5 714 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Ybx2Q9Z2C8 360 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Epb41l1Q9Z2H5 879 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Slc22a4Q9Z306 553 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Gm11983V9GXS8 105 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Dock8Q8C147 2100 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Igkv15-103A0A140T8P3 115 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Awat1A2ADU9 328 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Zfp300A2AE21 645 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Tmem74bA2AU34 232 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Spats1A2RRY8 269 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Osbpl8B9EJ86 889 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Mptx2D3YYJ7 219 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Spata31d1cE9QAF1 853 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Gm10260F6YVP7 152 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Gm45837F7D3W5 961 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Rundc3aO08576 446 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Ephb6O08644 1014 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Eftud2O08810 971 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Gnpda1O88958 289 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Rplp0P14869 317 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Cxcl10P17515 98 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 CratP47934 626 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Hcrtr1P58307 416 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Larp7Q05CL8 570 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Ctsll3Q3ULP7 331 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Q5SPV6 233 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Xrcc1Q60596 631 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Magee1Q6PCZ4 918 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Ptx4Q6RUU0 478 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Ssxb5Q6XAS2 159 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Rps27lQ6ZWY3 84 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Pithd1Q8BWR2 211 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Atg16l1Q8C0J2 607 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Slc25a16Q8C0K5 332 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Aqp12Q8CHJ2 290 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Utp6Q8VCY6 597 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Olfr952Q8VFD7 314 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 ChiaQ91XA9 473 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Pcdha8Q91Y12 946 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Ccdc182Q9D9C6 152 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Olfr955Q9EQ97 314 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Htr3bQ9JHJ5 437 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Gtf2h2Q9JIB4 396 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Orc3Q9JK30 715 aaKnown RBP10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Tcf23Q9JLR5 209 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Pdcd7Q9WTY1 482 aa10.41□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Hivep2Q3UHF7 2430 aa10.4□□□□□ -0.74
Tubb1-201ENSMUST00000016399 Gm21885A0A286YDN8 145 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 1700023F06RikA2AB62 382 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Gm6880A3KG45 208 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Gm5475D3YV11 175 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Gm4871D3Z0W7 314 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Klhl3E0CZ16 587 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Vmn1r177E9PXM3 309 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Rhox2gL7MUB9 191 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Kcnk1O08581 336 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Fv4P11370 679 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 CtsaP16675 474 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Hnf4aP49698 474 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Kcnab2P62482 367 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Irx2P81066 474 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Q14AM7 275 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Treml4Q3LRV9 263 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Kcnk6Q3TBV4 313 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Tmem38aQ3TMP8 298 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Gm1604bQ3TRG0 118 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Kdm4dQ3U2K5 510 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Spata6Q3U6K5 488 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Clca4bQ3UW98 925 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Rbbp7Q60973 425 aaKnown RBP10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Gngt1Q61012 74 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Map3k7Q62073 579 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Capn3Q64691 821 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Stx3Q64704 289 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Plekha6Q7TQG1 1173 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 RragdQ7TT45 449 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Ttc29Q80VM3 471 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Ppp1r12bQ8BG95 976 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Tubgcp5Q8BKN5 1024 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Snx16Q8C080 344 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Wdr60Q8C761 999 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Sertm1Q8CD78 107 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Pih1d2Q8CHR9 315 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 N4bp2l2Q8JZS6 575 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Nudt13Q8JZU0 352 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Rdh16f2Q8K3M1 318 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Vmn1r33Q8R2E0 305 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Slc35f6Q8VE96 372 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Rpa1Q8VEE4 623 aaKnown RBP10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Olfr1310Q8VF85 312 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Olfr522Q8VGL1 312 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Olfr48Q8VGN4 301 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Uts2rQ8VIH9 385 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Dennd2dQ91VV4 469 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Ppp6cQ9CQR6 305 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Uqcc2Q9CQY6 136 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Psmd9Q9CR00 222 aa10.4□□□□□ -0.75
Tubb1-201ENSMUST00000016399 Psma8Q9CWH6 250 aa10.4□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms