RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 ClpsQ9CQC2 113 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Uqcrc2Q9DB77 453 aaKnown RBP18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Aph1cQ9DCZ9 258 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Atp6ap1Q9R1Q9 463 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 OtofQ9ESF1 1997 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Zfp871G5E905 615 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn1r31L7N2F1 303 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rps3aP97351 264 aaKnown RBP18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tgtp2Q3T9E4 415 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Ap5b1Q3TAP4 876 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm11992Q5SS90 291 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Zdhhc20Q5Y5T1 380 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cd6Q61003 665 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tgtp1Q62293 415 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Klhl42Q8BFQ9 493 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Sh3rf2Q8BZT2 735 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Nectin3Q9JLB9 549 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Plxna2P70207 1894 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rp1P56716 2095 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 AccsA2AIG8 502 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Crisp4E9PVG4 293 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 AU018091E9PWS4 684 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Atg16l2Q6KAU8 623 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olig3Q6PFG8 273 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr1322Q7TQW3 310 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr1152Q7TR34 310 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vac14Q80WQ2 782 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Eml5Q8BQM8 1977 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tnfaip8l1Q8K288 186 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slco3a1Q8R3L5 710 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Impa2Q91UZ5 290 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mau2Q9D2X5 619 aaKnown RBP18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Kcne2Q9D808 123 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Armc8Q9DBR3 673 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Adam24Q9R160 761 aa18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Nup210Q9QY81 1886 aaKnown RBP18.07■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tmem265E9Q8G3 109 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm17615E9Q9P2 165 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Lrrc31F6VYM1 502 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trim15G3UY57 292 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Suv39h1O54864 412 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 TertO70372 1122 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cdc6O89033 562 aaKnown RBP18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 FhitO89106 150 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Serpina7P61939 418 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Pgap2Q3TQR0 254 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 G2e3Q5RJY2 716 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 ClpbQ60649 677 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Il18r1Q61098 537 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 OgnQ62000 298 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Wfikkn2Q7TQN3 571 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fam110bQ8C739 366 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc5a11Q8K0E3 673 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr690Q8VH18 315 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rsph1Q8VIG3 301 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trpv4Q9EPK8 871 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Akap8lQ9R0L7 642 aaKnown RBP18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Zfp383A0A087WRR7 490 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm7792A0A0J9YU01 481 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm29776A0A286YEC0 699 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm3183D3YUJ6 481 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr376E9Q4M1 320 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm3139J3QK78 481 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm3106J3QPH3 481 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 H2-Q1O19441 368 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Dhcr7O88455 471 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cops4O88544 406 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rgs14P97492 547 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Ephx4Q6IE26 359 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Paqr9Q6TCG2 375 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mup21Q80YX8 181 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 TiprlQ8BH58 271 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 TxlngQ8BHN1 524 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Pik3cbQ8BTI9 1064 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Phf11aQ8BVM9 293 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc41a2Q8BYR8 573 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Sertm1Q8CD78 107 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Thap1Q8CHW1 210 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn1r81Q8R286 306 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Sgip1Q8VD37 806 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Klrb1fQ8VD98 217 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Ing3Q8VEK6 421 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cyp2j9Q924D1 502 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trim16Q99PP9 556 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trpd52l3Q9CQ14 231 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 PpidQ9CR16 370 aaKnown RBP18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Amdhd1Q9DBA8 426 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Dusp6Q9DBB1 381 aa18.06■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Glipr1l3A0A1W2P7V2 236 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 NsmafO35242 920 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Foxq1O70220 400 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Stk16O88697 305 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Sbk2P0C5K1 362 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Csnk2bP67871 215 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 SgcdP82347 289 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tex10Q3URQ0 928 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Hepacam2Q4VAH7 463 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Hsd3b5Q61694 373 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Itih2Q61703 946 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Hs3st2Q673U1 367 aa18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms