RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C MRPL22P53881 309 aa5.82□□□□□ -1.48
SNF8YPL002C HRK1Q08732 759 aaKnown RBP5.82□□□□□ -1.48
SNF8YPL002C EDE1P34216 1381 aa5.81□□□□□ -1.48
SNF8YPL002C PRP6P19735 899 aaPredicted RBP5.81□□□□□ -1.48
SNF8YPL002C MDL2P33311 773 aa5.81□□□□□ -1.48
SNF8YPL002C YKL222CP35995 705 aa5.81□□□□□ -1.48
SNF8YPL002C AIM3P38266 947 aaKnown RBP5.81□□□□□ -1.48
SNF8YPL002C ATG14P38270 344 aa5.81□□□□□ -1.48
SNF8YPL002C QNS1P38795 714 aaKnown RBP5.81□□□□□ -1.48
SNF8YPL002C LYS4P49367 693 aaPredicted RBP5.81□□□□□ -1.48
SNF8YPL002C ADI1Q03677 179 aa5.81□□□□□ -1.48
SNF8YPL002C OXR1Q08952 273 aa5.81□□□□□ -1.48
SNF8YPL002C NUP192P47054 1683 aa5.81□□□□□ -1.48
SNF8YPL002C ADD66P36040 267 aa5.8□□□□□ -1.48
SNF8YPL002C DOT5P40553 215 aa5.8□□□□□ -1.48
SNF8YPL002C HXK1P04806 485 aaKnown RBP5.79□□□□□ -1.48
SNF8YPL002C AFG2P32794 780 aa5.79□□□□□ -1.48
SNF8YPL002C PIC2P40035 300 aa5.79□□□□□ -1.48
SNF8YPL002C RKM2Q03942 479 aa5.79□□□□□ -1.48
SNF8YPL002C SEC23P15303 768 aaKnown RBP5.78□□□□□ -1.48
SNF8YPL002C YEF3P16521 1044 aaKnown RBP5.78□□□□□ -1.48
SNF8YPL002C AIM26P32858 118 aa5.78□□□□□ -1.48
SNF8YPL002C RPT1P33299 467 aaKnown RBP5.78□□□□□ -1.48
SNF8YPL002C SRO9P25567 434 aaKnown RBP5.77□□□□□ -1.49
SNF8YPL002C YSC84P32793 468 aa5.77□□□□□ -1.49
SNF8YPL002C FLR1P38124 548 aa5.77□□□□□ -1.49
SNF8YPL002C GIP4P39732 760 aa5.77□□□□□ -1.49
SNF8YPL002C RCL1Q08096 367 aaPredicted RBP5.77□□□□□ -1.49
SNF8YPL002C RAV1P47104 1357 aa5.77□□□□□ -1.49
SNF8YPL002C IKI3Q06706 1349 aaKnown RBP5.76□□□□□ -1.49
SNF8YPL002C ENP1P38333 483 aaKnown RBP5.76□□□□□ -1.49
SNF8YPL002C NPR2P39923 615 aa5.76□□□□□ -1.49
SNF8YPL002C VPS53P47061 822 aa5.76□□□□□ -1.49
SNF8YPL002C EST2Q06163 884 aa5.76□□□□□ -1.49
SNF8YPL002C ROM2P51862 1356 aaKnown RBP5.76□□□□□ -1.49
SNF8YPL002C URB1P34241 1764 aaKnown RBP5.75□□□□□ -1.49
SNF8YPL002C KIP1P28742 1111 aa5.75□□□□□ -1.49
SNF8YPL002C FOL2P51601 243 aaKnown RBP5.75□□□□□ -1.49
SNF8YPL002C RIM8P53179 542 aa5.75□□□□□ -1.49
SNF8YPL002C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SNF8YPL002C RSC58Q07979 502 aa5.75□□□□□ -1.49
SNF8YPL002C PSK1P31374 1356 aa5.75□□□□□ -1.49
SNF8YPL002C RTC1Q08281 1341 aa5.74□□□□□ -1.49
SNF8YPL002C DED1P06634 604 aaKnown RBP5.74□□□□□ -1.49
SNF8YPL002C GPB2P39717 880 aa5.74□□□□□ -1.49
SNF8YPL002C YPL277CQ08989 487 aa5.74□□□□□ -1.49
SNF8YPL002C SEC20P28791 383 aa5.73□□□□□ -1.49
SNF8YPL002C SNO2P53823 222 aa5.73□□□□□ -1.49
SNF8YPL002C PTC5Q12511 572 aa5.73□□□□□ -1.49
SNF8YPL002C SOD2P00447 233 aa5.72□□□□□ -1.49
SNF8YPL002C RPS13P05756 151 aaKnown RBP5.72□□□□□ -1.49
SNF8YPL002C TOD6P34219 525 aa5.72□□□□□ -1.49
SNF8YPL002C ALG3P38179 458 aa5.72□□□□□ -1.49
SNF8YPL002C SEN54Q02825 467 aaPredicted RBP5.72□□□□□ -1.49
SNF8YPL002C TAF8Q03750 510 aa5.72□□□□□ -1.49
SNF8YPL002C SPS1P08458 490 aa5.71□□□□□ -1.5
SNF8YPL002C HDA2Q06629 674 aa5.71□□□□□ -1.5
SNF8YPL002C TY4B-HP0C2J7 1802 aa5.71□□□□□ -1.5
SNF8YPL002C TY4B-JP47024 1803 aa5.71□□□□□ -1.5
SNF8YPL002C YKL133CP36066 463 aa5.7□□□□□ -1.5
SNF8YPL002C NOP7P53261 605 aaKnown RBP5.7□□□□□ -1.5
SNF8YPL002C YGR122WP53272 402 aa5.7□□□□□ -1.5
SNF8YPL002C NBA1Q08229 501 aaKnown RBP5.7□□□□□ -1.5
SNF8YPL002C SPT7P35177 1332 aa5.7□□□□□ -1.5
SNF8YPL002C SSM4P40318 1319 aa5.7□□□□□ -1.5
SNF8YPL002C COQ4O13525 335 aa5.69□□□□□ -1.5
SNF8YPL002C PRE9P23638 258 aaKnown RBP5.69□□□□□ -1.5
SNF8YPL002C BAP2P38084 609 aa5.69□□□□□ -1.5
SNF8YPL002C RAT1Q02792 1006 aaKnown RBP5.69□□□□□ -1.5
SNF8YPL002C ROD1Q02805 837 aa5.69□□□□□ -1.5
SNF8YPL002C RSF2P46974 1380 aa5.68□□□□□ -1.5
SNF8YPL002C FKS3Q04952 1785 aa5.68□□□□□ -1.5
SNF8YPL002C SNF5P18480 905 aa5.68□□□□□ -1.5
SNF8YPL002C ESL2P36168 1195 aa5.68□□□□□ -1.5
SNF8YPL002C TNA1P53322 534 aa5.68□□□□□ -1.5
SNF8YPL002C HOS3Q02959 697 aaKnown RBP5.68□□□□□ -1.5
SNF8YPL002C SLM3Q12093 417 aa5.68□□□□□ -1.5
SNF8YPL002C PPH3P32345 308 aa5.67□□□□□ -1.5
SNF8YPL002C ABZ1P37254 787 aaPredicted RBP5.67□□□□□ -1.5
SNF8YPL002C CCZ1P38273 704 aa5.67□□□□□ -1.5
SNF8YPL002C MRPS18P42847 217 aa5.67□□□□□ -1.5
SNF8YPL002C MCD1Q12158 566 aa5.67□□□□□ -1.5
SNF8YPL002C SPO21Q12411 609 aa5.67□□□□□ -1.5
SNF8YPL002C YRF1-3P0CX14 1859 aa5.66□□□□□ -1.5
SNF8YPL002C YRF1-7P0CX15 1859 aa5.66□□□□□ -1.5
SNF8YPL002C YRF1-6P53819 1859 aa5.66□□□□□ -1.5
SNF8YPL002C TAF13P11747 167 aa5.66□□□□□ -1.5
SNF8YPL002C RPS26AP39938 119 aaKnown RBP5.66□□□□□ -1.5
SNF8YPL002C RPS26BP39939 119 aaKnown RBP5.66□□□□□ -1.5
SNF8YPL002C YFL054CP43549 646 aa5.66□□□□□ -1.5
SNF8YPL002C GNP1P48813 663 aa5.66□□□□□ -1.5
SNF8YPL002C YDR132CQ03900 495 aa5.66□□□□□ -1.5
SNF8YPL002C TOM1Q03280 3268 aa5.66□□□□□ -1.5
SNF8YPL002C RAD2P07276 1031 aa5.65□□□□□ -1.5
SNF8YPL002C CYC8P14922 966 aa5.65□□□□□ -1.5
SNF8YPL002C MKK2P32491 506 aa5.65□□□□□ -1.5
SNF8YPL002C YKR075CP36155 307 aa5.65□□□□□ -1.5
SNF8YPL002C PIK1P39104 1066 aa5.65□□□□□ -1.5
SNF8YPL002C HXT13P39924 564 aa5.65□□□□□ -1.5
SNF8YPL002C HXT17P53631 564 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms