RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	YOR059C	Q08448	450 aa	Known RBP	4.29	□□□□□ -1.72
VAM10	YOR068C	OSH2	Q12451	1283 aa		4.29	□□□□□ -1.72
VAM10	YOR068C	CIT1	P00890	479 aa		4.28	□□□□□ -1.72
VAM10	YOR068C	MET6	P05694	767 aa	Known RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	GCD1	P09032	578 aa	Predicted RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	PRP9	P19736	530 aa	Known RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	HSP60	P19882	572 aa	Known RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	HBS1	P32769	611 aa	Known RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	PEX7	P39108	375 aa		4.28	□□□□□ -1.72
VAM10	YOR068C	RSP5	P39940	809 aa	Known RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	CHZ1	P40019	153 aa	Predicted RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	YGR130C	P53278	816 aa		4.28	□□□□□ -1.72
VAM10	YOR068C	UTP14	Q04500	899 aa	Known RBP	4.28	□□□□□ -1.72
VAM10	YOR068C	EAF1	Q06337	982 aa		4.28	□□□□□ -1.72
VAM10	YOR068C	ACM1	Q08981	209 aa		4.28	□□□□□ -1.72
VAM10	YOR068C	TRP3	P00937	484 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	SRO9	P25567	434 aa	Known RBP	4.27	□□□□□ -1.73
VAM10	YOR068C	ARE1	P25628	610 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	SCT1	P32784	759 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	TIM23	P32897	222 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	MDL2	P33311	773 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	YKL151C	P36059	337 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	YKR073C	P36153	106 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	UGA2	P38067	497 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	PIK1	P39104	1066 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	HRQ1	Q05549	1077 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	DUS3	Q06053	668 aa	Known RBP	4.27	□□□□□ -1.73
VAM10	YOR068C	YDR306C	Q06640	478 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	TRE1	Q08919	783 aa		4.27	□□□□□ -1.73
VAM10	YOR068C	BI4	P03879	638 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	CAN1	P04817	590 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	GAL11	P19659	1081 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	PRO1	P32264	428 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	CCZ1	P38273	704 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
VAM10	YOR068C	GEM1	P39722	662 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	LSB3	P43603	459 aa	Known RBP	4.26	□□□□□ -1.73
VAM10	YOR068C	RTA1	P53047	317 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	TAF8	Q03750	510 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	RSC58	Q07979	502 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	YGR161W-C	Q3E744	92 aa		4.26	□□□□□ -1.73
VAM10	YOR068C	CYC7	P00045	113 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	ERR1	P0CX10	437 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	ERR2	P0CX11	437 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	CDC12	P32468	407 aa	Known RBP	4.25	□□□□□ -1.73
VAM10	YOR068C	TOA1	P32773	286 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	BET3	P36149	193 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	PTC7	P38797	343 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	GGA2	P38817	585 aa	Known RBP	4.25	□□□□□ -1.73
VAM10	YOR068C	CCC2	P38995	1004 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	NUP82	P40368	713 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	GTS1	P40956	396 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	SDH1	Q00711	640 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	SSY1	Q03770	852 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	YLR125W	Q12138	136 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	HIF1	Q12373	385 aa		4.25	□□□□□ -1.73
VAM10	YOR068C	PHO8	P11491	566 aa		4.24	□□□□□ -1.73
VAM10	YOR068C	TOP3	P13099	656 aa		4.24	□□□□□ -1.73
VAM10	YOR068C	AFR1	P33304	620 aa		4.24	□□□□□ -1.73
VAM10	YOR068C	ERT1	P38140	529 aa		4.24	□□□□□ -1.73
VAM10	YOR068C	YGL081W	P53156	320 aa		4.24	□□□□□ -1.73
VAM10	YOR068C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
VAM10	YOR068C	HBN1	Q96VH4	193 aa		4.24	□□□□□ -1.73
VAM10	YOR068C	TSR4	P25040	408 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	PPH3	P32345	308 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	AAR2	P32357	355 aa	Predicted RBP	4.23	□□□□□ -1.73
VAM10	YOR068C	AIM26	P32858	118 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	YBR284W	P38150	797 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	TOS1	P38288	455 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	MNN1	P39106	762 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	SAH1	P39954	449 aa	Known RBP	4.23	□□□□□ -1.73
VAM10	YOR068C	SIT1	P39980	628 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	NPP2	P39997	493 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	HUL4	P40985	892 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	MTC3	P53077	123 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	NBA1	Q08229	501 aa	Known RBP	4.23	□□□□□ -1.73
VAM10	YOR068C	LPX1	Q12405	387 aa	Known RBP	4.23	□□□□□ -1.73
VAM10	YOR068C	NSI1	Q12457	570 aa		4.23	□□□□□ -1.73
VAM10	YOR068C	MSD1	P15179	658 aa	Known RBP	4.22	□□□□□ -1.73
VAM10	YOR068C	ACE2	P21192	770 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	NPP1	P25353	742 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	THI4	P32318	326 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	ATG36	P46983	293 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	TPO2	P53283	614 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	SRP1	Q02821	542 aa	Known RBP	4.22	□□□□□ -1.73
VAM10	YOR068C	BUL2	Q03758	920 aa	Known RBP	4.22	□□□□□ -1.73
VAM10	YOR068C	ATG13	Q06628	738 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	YDL124W	Q07551	312 aa	Known RBP	4.22	□□□□□ -1.73
VAM10	YOR068C	MDM38	Q08179	573 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	MED7	Q08278	222 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	RSB1	Q08417	382 aa		4.22	□□□□□ -1.73
VAM10	YOR068C	THS1	P04801	734 aa	Known RBP	4.21	□□□□□ -1.74
VAM10	YOR068C	ADP1	P25371	1049 aa		4.21	□□□□□ -1.74
VAM10	YOR068C	PET10	P36139	283 aa		4.21	□□□□□ -1.74
VAM10	YOR068C	ABZ1	P37254	787 aa	Predicted RBP	4.21	□□□□□ -1.74
VAM10	YOR068C	YRO2	P38079	344 aa		4.21	□□□□□ -1.74
VAM10	YOR068C	GIC1	P38785	314 aa		4.21	□□□□□ -1.74
VAM10	YOR068C	YJR008W	P47085	338 aa		4.21	□□□□□ -1.74
VAM10	YOR068C	ALO1	P54783	526 aa	Known RBP	4.21	□□□□□ -1.74
VAM10	YOR068C	YLL058W	Q12198	575 aa		4.21	□□□□□ -1.74

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