RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W TIP41Q12199 356 aa8.59□□□□□ -1.03
NUP53YMR153W NCR1Q12200 1170 aa8.59□□□□□ -1.03
NUP53YMR153W TUF1P02992 437 aaKnown RBP8.58□□□□□ -1.04
NUP53YMR153W RPL19AP0CX82 189 aaKnown RBP8.58□□□□□ -1.04
NUP53YMR153W RPL19BP0CX83 189 aaPredicted RBP8.58□□□□□ -1.04
NUP53YMR153W POA1P38218 177 aa8.58□□□□□ -1.04
NUP53YMR153W EAF5P39995 279 aa8.58□□□□□ -1.04
NUP53YMR153W TPO2P53283 614 aa8.58□□□□□ -1.04
NUP53YMR153W SMC5Q08204 1093 aa8.58□□□□□ -1.04
NUP53YMR153W DED1P06634 604 aaKnown RBP8.57□□□□□ -1.04
NUP53YMR153W SRD1P09007 221 aa8.57□□□□□ -1.04
NUP53YMR153W EFT1P32324 842 aaKnown RBP8.57□□□□□ -1.04
NUP53YMR153W SDA1P53313 767 aaKnown RBP8.57□□□□□ -1.04
NUP53YMR153W PGA2P53903 129 aa8.57□□□□□ -1.04
NUP53YMR153W YOR296WQ08748 1289 aa8.57□□□□□ -1.04
NUP53YMR153W RFC5P38251 354 aa8.56□□□□□ -1.04
NUP53YMR153W YGR035CP53222 116 aa8.56□□□□□ -1.04
NUP53YMR153W PIL1P53252 339 aaKnown RBP8.56□□□□□ -1.04
NUP53YMR153W SKY1Q03656 742 aa8.56□□□□□ -1.04
NUP53YMR153W EIS1Q05050 843 aaKnown RBP8.56□□□□□ -1.04
NUP53YMR153W ELG1Q12050 791 aa8.56□□□□□ -1.04
NUP53YMR153W HIF1Q12373 385 aa8.56□□□□□ -1.04
NUP53YMR153W RLF2Q12495 606 aa8.56□□□□□ -1.04
NUP53YMR153W SMC6Q12749 1114 aa8.56□□□□□ -1.04
NUP53YMR153W YDR034W-BQ6Q5X2 51 aa8.56□□□□□ -1.04
NUP53YMR153W SPT2P06843 333 aaPredicted RBP8.55□□□□□ -1.04
NUP53YMR153W RPN3P40016 523 aaKnown RBP8.55□□□□□ -1.04
NUP53YMR153W FYV10P40492 516 aa8.55□□□□□ -1.04
NUP53YMR153W ULP2P40537 1034 aaPredicted RBP8.55□□□□□ -1.04
NUP53YMR153W MAG2Q06436 670 aaKnown RBP8.55□□□□□ -1.04
NUP53YMR153W DCS2Q12123 353 aa8.55□□□□□ -1.04
NUP53YMR153W CPA2P03965 1118 aaKnown RBP8.54□□□□□ -1.04
NUP53YMR153W ATG19P35193 415 aa8.54□□□□□ -1.04
NUP53YMR153W TTI1P36097 1038 aa8.54□□□□□ -1.04
NUP53YMR153W MUK1Q02866 612 aa8.54□□□□□ -1.04
NUP53YMR153W EMI2Q04409 500 aaKnown RBP8.54□□□□□ -1.04
NUP53YMR153W NOC3Q07896 663 aaPredicted RBP8.54□□□□□ -1.04
NUP53YMR153W HFI1Q12060 488 aa8.54□□□□□ -1.04
NUP53YMR153W WHI2P12611 486 aa8.54□□□□□ -1.04
NUP53YMR153W FRS2P15625 503 aaKnown RBP8.54□□□□□ -1.04
NUP53YMR153W PRP22P24384 1145 aaKnown RBP8.54□□□□□ -1.04
NUP53YMR153W FMP10P40098 244 aa8.54□□□□□ -1.04
NUP53YMR153W YGR153WP48238 217 aa8.54□□□□□ -1.04
NUP53YMR153W GCV2P49095 1034 aa8.54□□□□□ -1.04
NUP53YMR153W YGL081WP53156 320 aa8.54□□□□□ -1.04
NUP53YMR153W RTC4P53850 401 aa8.54□□□□□ -1.04
NUP53YMR153W VPS20Q04272 221 aa8.54□□□□□ -1.04
NUP53YMR153W COQ9Q05779 260 aa8.54□□□□□ -1.04
NUP53YMR153W MSD1P15179 658 aaKnown RBP8.53□□□□□ -1.04
NUP53YMR153W ALG1P16661 449 aa8.53□□□□□ -1.04
NUP53YMR153W PIH1P38768 344 aa8.53□□□□□ -1.04
NUP53YMR153W CBK1P53894 756 aa8.53□□□□□ -1.04
NUP53YMR153W ROD1Q02805 837 aa8.53□□□□□ -1.04
NUP53YMR153W ADY4Q05955 493 aa8.53□□□□□ -1.04
NUP53YMR153W TCP1P12612 559 aaKnown RBP8.52□□□□□ -1.05
NUP53YMR153W RGP1P16664 663 aa8.52□□□□□ -1.05
NUP53YMR153W SIP3P38717 1229 aa8.52□□□□□ -1.05
NUP53YMR153W ROG3P43602 733 aa8.52□□□□□ -1.05
NUP53YMR153W AVT1P47082 602 aa8.52□□□□□ -1.05
NUP53YMR153W JJJ3P47138 172 aa8.52□□□□□ -1.05
NUP53YMR153W NCS2P53923 493 aaPredicted RBP8.52□□□□□ -1.05
NUP53YMR153W YPL150WQ12152 901 aa8.52□□□□□ -1.05
NUP53YMR153W PTC5Q12511 572 aa8.52□□□□□ -1.05
NUP53YMR153W IDI1P15496 288 aa8.51□□□□□ -1.05
NUP53YMR153W BUD2P33314 1104 aa8.51□□□□□ -1.05
NUP53YMR153W YHR131CP38835 850 aa8.51□□□□□ -1.05
NUP53YMR153W OPT1P40897 799 aa8.51□□□□□ -1.05
NUP53YMR153W ALT2P52892 507 aa8.51□□□□□ -1.05
NUP53YMR153W MET13P53128 600 aa8.51□□□□□ -1.05
NUP53YMR153W YNL134CP53912 376 aaKnown RBP8.51□□□□□ -1.05
NUP53YMR153W HEH2Q03281 663 aa8.51□□□□□ -1.05
NUP53YMR153W PGI1P12709 554 aaKnown RBP8.5□□□□□ -1.05
NUP53YMR153W DBP5P20449 482 aaKnown RBP8.5□□□□□ -1.05
NUP53YMR153W URK1P27515 501 aa8.5□□□□□ -1.05
NUP53YMR153W PRX1P34227 261 aaKnown RBP8.5□□□□□ -1.05
NUP53YMR153W PEX14P53112 341 aa8.5□□□□□ -1.05
NUP53YMR153W FUS2Q05670 677 aa8.5□□□□□ -1.05
NUP53YMR153W YLR455WQ06188 304 aa8.5□□□□□ -1.05
NUP53YMR153W PCD1Q12524 340 aa8.5□□□□□ -1.05
NUP53YMR153W YLR422WQ06409 1932 aa8.49□□□□□ -1.05
NUP53YMR153W PRC1P00729 532 aa8.49□□□□□ -1.05
NUP53YMR153W HXK1P04806 485 aaKnown RBP8.49□□□□□ -1.05
NUP53YMR153W ADE2P21264 571 aaKnown RBP8.49□□□□□ -1.05
NUP53YMR153W RAM2P29703 316 aa8.49□□□□□ -1.05
NUP53YMR153W PET10P36139 283 aa8.49□□□□□ -1.05
NUP53YMR153W APN2P38207 520 aa8.49□□□□□ -1.05
NUP53YMR153W SLX1P38324 304 aa8.49□□□□□ -1.05
NUP53YMR153W ERC1P38767 581 aa8.49□□□□□ -1.05
NUP53YMR153W LAM5P43560 674 aa8.49□□□□□ -1.05
NUP53YMR153W NPA3P47122 385 aa8.49□□□□□ -1.05
NUP53YMR153W INP52P50942 1183 aa8.49□□□□□ -1.05
NUP53YMR153W UBA2P52488 636 aa8.49□□□□□ -1.05
NUP53YMR153W PNG1Q02890 363 aa8.49□□□□□ -1.05
NUP53YMR153W YEL076C-AP0CX16 216 aa8.48□□□□□ -1.05
NUP53YMR153W YLR464WP0CX17 216 aa8.48□□□□□ -1.05
NUP53YMR153W TIF1P10081 395 aaKnown RBP8.48□□□□□ -1.05
NUP53YMR153W PFK1P16861 987 aaKnown RBP8.48□□□□□ -1.05
NUP53YMR153W YEL076CP39971 216 aa8.48□□□□□ -1.05
NUP53YMR153W ESL1P40456 1118 aa8.48□□□□□ -1.05
NUP53YMR153W RTT102P53330 157 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms