RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W UGA2P38067 497 aa4.43□□□□□ -1.7
SEC22YLR268W THI12P42883 340 aa4.43□□□□□ -1.7
SEC22YLR268W THI5P43534 340 aa4.43□□□□□ -1.7
SEC22YLR268W THI11P47183 340 aa4.43□□□□□ -1.7
SEC22YLR268W EXG2P52911 562 aa4.43□□□□□ -1.7
SEC22YLR268W THI13Q07748 340 aa4.43□□□□□ -1.7
SEC22YLR268W PPM2Q08282 695 aa4.43□□□□□ -1.7
SEC22YLR268W HIS5P07172 385 aa4.42□□□□□ -1.7
SEC22YLR268W ACM1Q08981 209 aa4.42□□□□□ -1.7
SEC22YLR268W GNT1Q12096 491 aa4.42□□□□□ -1.7
SEC22YLR268W THS1P04801 734 aaKnown RBP4.41□□□□□ -1.7
SEC22YLR268W RAD2P07276 1031 aa4.41□□□□□ -1.7
SEC22YLR268W SEC20P28791 383 aa4.41□□□□□ -1.7
SEC22YLR268W MOH1P38191 138 aa4.41□□□□□ -1.7
SEC22YLR268W POA1P38218 177 aa4.41□□□□□ -1.7
SEC22YLR268W GEM1P39722 662 aa4.41□□□□□ -1.7
SEC22YLR268W CHA4P43634 648 aa4.41□□□□□ -1.7
SEC22YLR268W MRL1Q06815 381 aa4.41□□□□□ -1.7
SEC22YLR268W BI4P03879 638 aa4.4□□□□□ -1.71
SEC22YLR268W HFM1P51979 1187 aa4.4□□□□□ -1.71
SEC22YLR268W AIM39Q08223 395 aa4.4□□□□□ -1.71
SEC22YLR268W RPL11AP0C0W9 174 aaKnown RBP4.39□□□□□ -1.71
SEC22YLR268W CYC8P14922 966 aa4.39□□□□□ -1.71
SEC22YLR268W PFK1P16861 987 aaKnown RBP4.39□□□□□ -1.71
SEC22YLR268W HRR25P29295 494 aaKnown RBP4.39□□□□□ -1.71
SEC22YLR268W SLA2P33338 968 aa4.39□□□□□ -1.71
SEC22YLR268W ZRG8P40021 1076 aa4.39□□□□□ -1.71
SEC22YLR268W MXR1P40029 184 aa4.39□□□□□ -1.71
SEC22YLR268W RPL11BQ3E757 174 aaPredicted RBP4.39□□□□□ -1.71
SEC22YLR268W GCR1P07261 785 aa4.37□□□□□ -1.71
SEC22YLR268W UBA2P52488 636 aa4.37□□□□□ -1.71
SEC22YLR268W ENB1Q08299 606 aa4.37□□□□□ -1.71
SEC22YLR268W KCS1Q12494 1050 aa4.37□□□□□ -1.71
SEC22YLR268W PNT1P38969 423 aa4.36□□□□□ -1.71
SEC22YLR268W TIF35Q04067 274 aaKnown RBP4.36□□□□□ -1.71
SEC22YLR268W DBP2P24783 546 aaKnown RBP4.35□□□□□ -1.71
SEC22YLR268W RER2P35196 286 aa4.35□□□□□ -1.71
SEC22YLR268W MCM7P38132 845 aa4.35□□□□□ -1.71
SEC22YLR268W RPS26AP39938 119 aaKnown RBP4.35□□□□□ -1.71
SEC22YLR268W RPS26BP39939 119 aaKnown RBP4.35□□□□□ -1.71
SEC22YLR268W XYL2Q07993 356 aa4.35□□□□□ -1.71
SEC22YLR268W ENA1P13587 1091 aa4.34□□□□□ -1.71
SEC22YLR268W MTC3P53077 123 aa4.34□□□□□ -1.71
SEC22YLR268W ENA2Q01896 1091 aa4.34□□□□□ -1.71
SEC22YLR268W ENA5Q12691 1091 aa4.34□□□□□ -1.71
SEC22YLR268W RAD27P26793 382 aa4.33□□□□□ -1.72
SEC22YLR268W YAP1801P38856 637 aa4.33□□□□□ -1.72
SEC22YLR268W SPP382Q06411 708 aaPredicted RBP4.33□□□□□ -1.72
SEC22YLR268W CDA1Q06702 301 aa4.33□□□□□ -1.72
SEC22YLR268W EFT1P32324 842 aaKnown RBP4.32□□□□□ -1.72
SEC22YLR268W IPL1P38991 367 aa4.32□□□□□ -1.72
SEC22YLR268W YGR012WP53206 393 aa4.32□□□□□ -1.72
SEC22YLR268W RTT10Q08924 1013 aa4.32□□□□□ -1.72
SEC22YLR268W YLL058WQ12198 575 aa4.32□□□□□ -1.72
SEC22YLR268W OSW2Q12202 724 aa4.32□□□□□ -1.72
SEC22YLR268W LAS17Q12446 633 aa4.32□□□□□ -1.72
SEC22YLR268W SPE1P08432 466 aa4.31□□□□□ -1.72
SEC22YLR268W URM1P40554 99 aaPredicted RBP4.31□□□□□ -1.72
SEC22YLR268W QRI1P43123 477 aaKnown RBP4.31□□□□□ -1.72
SEC22YLR268W GUP2Q08929 609 aa4.31□□□□□ -1.72
SEC22YLR268W TMA46Q12000 345 aaKnown RBP4.31□□□□□ -1.72
SEC22YLR268W NPC2Q12408 173 aa4.31□□□□□ -1.72
SEC22YLR268W ATG19P35193 415 aa4.3□□□□□ -1.72
SEC22YLR268W ATF1P40353 525 aa4.3□□□□□ -1.72
SEC22YLR268W BUL1P48524 976 aa4.3□□□□□ -1.72
SEC22YLR268W PSP2P50109 593 aaKnown RBP4.3□□□□□ -1.72
SEC22YLR268W NCS6P53088 359 aa4.3□□□□□ -1.72
SEC22YLR268W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72 RIP-Chip
SEC22YLR268W OMS1Q06668 471 aa4.3□□□□□ -1.72
SEC22YLR268W KTR4P38131 464 aa4.29□□□□□ -1.72
SEC22YLR268W STU2P46675 888 aa4.29□□□□□ -1.72
SEC22YLR268W YLR040CQ07988 224 aa4.29□□□□□ -1.72
SEC22YLR268W YOL073CQ08232 322 aa4.29□□□□□ -1.72
SEC22YLR268W HSF1P10961 833 aa4.28□□□□□ -1.72
SEC22YLR268W MGE1P38523 228 aa4.28□□□□□ -1.72
SEC22YLR268W CCC2P38995 1004 aa4.28□□□□□ -1.72
SEC22YLR268W SEN54Q02825 467 aaPredicted RBP4.28□□□□□ -1.72
SEC22YLR268W TMN2Q04562 672 aa4.28□□□□□ -1.72
SEC22YLR268W ESF1Q06344 628 aaKnown RBP4.28□□□□□ -1.72
SEC22YLR268W BDF2Q07442 638 aa4.28□□□□□ -1.72
SEC22YLR268W KAR4P25583 335 aa4.27□□□□□ -1.73
SEC22YLR268W FUN30P31380 1131 aa4.27□□□□□ -1.73
SEC22YLR268W LYP1P32487 611 aa4.27□□□□□ -1.73
SEC22YLR268W ECM21P38167 1117 aaKnown RBP4.27□□□□□ -1.73
SEC22YLR268W YJR107WP47145 328 aa4.27□□□□□ -1.73
SEC22YLR268W MDM38Q08179 573 aa4.27□□□□□ -1.73
SEC22YLR268W MCH5Q08777 521 aa4.27□□□□□ -1.73
SEC22YLR268W MCM2P29469 868 aa4.26□□□□□ -1.73
SEC22YLR268W SRP101P32916 621 aa4.26□□□□□ -1.73
SEC22YLR268W SRT1Q03175 343 aa4.26□□□□□ -1.73
SEC22YLR268W RKM4Q12504 494 aa4.26□□□□□ -1.73
SEC22YLR268W TRP2P00899 507 aaKnown RBP4.25□□□□□ -1.73
SEC22YLR268W YKL151CP36059 337 aa4.25□□□□□ -1.73
SEC22YLR268W SUL1P38359 859 aa4.25□□□□□ -1.73
SEC22YLR268W HRQ1Q05549 1077 aa4.25□□□□□ -1.73
SEC22YLR268W SLD2P34252 453 aa4.24□□□□□ -1.73
SEC22YLR268W GIC1P38785 314 aa4.24□□□□□ -1.73
SEC22YLR268W SNM1P40993 198 aa4.24□□□□□ -1.73
SEC22YLR268W TIM44Q01852 431 aa4.24□□□□□ -1.73
SEC22YLR268W SPR28Q04921 423 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms