RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W HXK1P04806 485 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W FBP1P09201 348 aa5.13□□□□□ -1.59
CBF5YLR175W RAD18P10862 487 aa5.13□□□□□ -1.59
CBF5YLR175W FRS2P15625 503 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W TEC1P18412 486 aa5.13□□□□□ -1.59
CBF5YLR175W SRO9P25567 434 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W CDC3P32457 520 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W RPN12P32496 274 aa5.13□□□□□ -1.59
CBF5YLR175W SAS3P34218 831 aa5.13□□□□□ -1.59
CBF5YLR175W PHO88P38264 188 aaPredicted RBP5.13□□□□□ -1.59
CBF5YLR175W PRE3P38624 215 aa5.13□□□□□ -1.59
CBF5YLR175W PAN5P38787 379 aa5.13□□□□□ -1.59
CBF5YLR175W PAC1P39946 494 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W ASE1P50275 885 aa5.13□□□□□ -1.59
CBF5YLR175W CUE3P53137 624 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W KXD1P53158 218 aa5.13□□□□□ -1.59
CBF5YLR175W RTC4P53850 401 aa5.13□□□□□ -1.59
CBF5YLR175W ALD6P54115 500 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W STE20Q03497 939 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W YML083CQ04526 418 aa5.13□□□□□ -1.59
CBF5YLR175W UBX5Q06682 500 aa5.13□□□□□ -1.59
CBF5YLR175W NBL1Q3E7Y6 73 aa5.13□□□□□ -1.59
CBF5YLR175W PDC1P06169 563 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W THR4P16120 514 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W PWP2P25635 923 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W URA1P28272 314 aaPredicted RBP5.13□□□□□ -1.59
CBF5YLR175W GUT2P32191 649 aa5.13□□□□□ -1.59
CBF5YLR175W STT3P39007 718 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W GPB2P39717 880 aa5.13□□□□□ -1.59
CBF5YLR175W RVS167P39743 482 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W RRN7P40992 514 aa5.13□□□□□ -1.59
CBF5YLR175W FIG4P42837 879 aa5.13□□□□□ -1.59
CBF5YLR175W DAK2P43550 591 aa5.13□□□□□ -1.59
CBF5YLR175W FMS1P50264 508 aa5.13□□□□□ -1.59
CBF5YLR175W BNI5P53890 448 aaKnown RBP5.13□□□□□ -1.59
CBF5YLR175W GIS4Q04233 774 aa5.13□□□□□ -1.59
CBF5YLR175W RBA50Q04418 439 aa5.13□□□□□ -1.59
CBF5YLR175W GUD1Q07729 489 aa5.13□□□□□ -1.59
CBF5YLR175W FRA1Q07825 749 aa5.13□□□□□ -1.59
CBF5YLR175W YOR296WQ08748 1289 aa5.13□□□□□ -1.59
CBF5YLR175W BMT6Q12291 365 aa5.13□□□□□ -1.59
CBF5YLR175W PTC5Q12511 572 aa5.13□□□□□ -1.59
CBF5YLR175W RGP1P16664 663 aa5.12□□□□□ -1.59
CBF5YLR175W BMH1P29311 267 aaKnown RBP5.12□□□□□ -1.59
CBF5YLR175W SPT16P32558 1035 aaKnown RBP5.12□□□□□ -1.59
CBF5YLR175W UGA4P32837 571 aa5.12□□□□□ -1.59
CBF5YLR175W TGL1P34163 548 aa5.12□□□□□ -1.59
CBF5YLR175W YKT6P36015 200 aaKnown RBP5.12□□□□□ -1.59
CBF5YLR175W YKR018CP36114 725 aa5.12□□□□□ -1.59
CBF5YLR175W ETP1P38748 585 aaKnown RBP5.12□□□□□ -1.59
CBF5YLR175W ATG3P40344 310 aa5.12□□□□□ -1.59
CBF5YLR175W YPT11P48559 417 aa5.12□□□□□ -1.59
CBF5YLR175W LIF1P53150 421 aa5.12□□□□□ -1.59
CBF5YLR175W YAF9P53930 226 aa5.12□□□□□ -1.59
CBF5YLR175W CSM3Q04659 317 aa5.12□□□□□ -1.59
CBF5YLR175W SPH1Q06160 661 aa5.12□□□□□ -1.59
CBF5YLR175W MMR1Q06324 491 aa5.12□□□□□ -1.59
CBF5YLR175W SUE1Q06524 206 aa5.12□□□□□ -1.59
CBF5YLR175W SLK19Q08581 821 aaKnown RBP5.12□□□□□ -1.59
CBF5YLR175W CFT2Q12102 859 aaPredicted RBP5.12□□□□□ -1.59
CBF5YLR175W APC11Q12157 165 aa5.12□□□□□ -1.59
CBF5YLR175W FOB1O13329 566 aa5.11□□□□□ -1.59
CBF5YLR175W TY1B-AO13527 1196 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W CHL1P22516 861 aaPredicted RBP5.11□□□□□ -1.59
CBF5YLR175W MCD4P36051 919 aa5.11□□□□□ -1.59
CBF5YLR175W APE3P37302 537 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W THI6P41835 540 aa5.11□□□□□ -1.59
CBF5YLR175W YGR153WP48238 217 aa5.11□□□□□ -1.59
CBF5YLR175W DSE4P53753 1117 aa5.11□□□□□ -1.59
CBF5YLR175W OYE2Q03558 400 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W BUL2Q03758 920 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W TRS120Q04183 1289 aa5.11□□□□□ -1.59
CBF5YLR175W TMA64Q04600 565 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W EIS1Q05050 843 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W SMD2Q06217 110 aaKnown RBP5.11□□□□□ -1.59
CBF5YLR175W YPR084WQ06821 456 aa5.11□□□□□ -1.59
CBF5YLR175W GPA1P08539 472 aa5.1□□□□□ -1.59
CBF5YLR175W VMA2P16140 517 aaKnown RBP5.1□□□□□ -1.59
CBF5YLR175W CLC1P17891 233 aa5.1□□□□□ -1.59
CBF5YLR175W CKA2P19454 339 aa5.1□□□□□ -1.59
CBF5YLR175W MCM4P30665 933 aaKnown RBP5.1□□□□□ -1.59
CBF5YLR175W KNS1P32350 737 aaPredicted RBP5.1□□□□□ -1.59
CBF5YLR175W MOT2P34909 587 aaKnown RBP5.1□□□□□ -1.59
CBF5YLR175W ISW1P38144 1129 aa5.1□□□□□ -1.59
CBF5YLR175W SUL1P38359 859 aa5.1□□□□□ -1.59
CBF5YLR175W KTR7P40504 517 aa5.1□□□□□ -1.59
CBF5YLR175W CIT3P43635 486 aa5.1□□□□□ -1.59
CBF5YLR175W CDC19P00549 500 aaKnown RBP5.09□□□□□ -1.59
CBF5YLR175W HIS4P00815 799 aaKnown RBP5.09□□□□□ -1.59
CBF5YLR175W PHR1P05066 565 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
CBF5YLR175W TAF13P11747 167 aa5.09□□□□□ -1.59
CBF5YLR175W CDC60P26637 1090 aaKnown RBP5.09□□□□□ -1.59
CBF5YLR175W SLD2P34252 453 aa5.09□□□□□ -1.59
CBF5YLR175W MCR1P36060 302 aaKnown RBP5.09□□□□□ -1.59
CBF5YLR175W DID4P36108 232 aa5.09□□□□□ -1.59
CBF5YLR175W RKM3P38222 552 aa5.09□□□□□ -1.59
CBF5YLR175W ERG7P38604 731 aa5.09□□□□□ -1.59
CBF5YLR175W NPR3P38742 1146 aa5.09□□□□□ -1.59
CBF5YLR175W YER130CP39959 443 aa5.09□□□□□ -1.59
CBF5YLR175W SPR3P41901 512 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms