RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C XKS1P42826 600 aa4.72□□□□□ -1.65
SDO1YLR022C YGL140CP53120 1219 aa4.72□□□□□ -1.65
SDO1YLR022C YGR122WP53272 402 aa4.72□□□□□ -1.65
SDO1YLR022C PEX7P39108 375 aa4.71□□□□□ -1.66
SDO1YLR022C PTC7P38797 343 aa4.7□□□□□ -1.66
SDO1YLR022C NMD3P38861 518 aaKnown RBP4.7□□□□□ -1.66
SDO1YLR022C RKM2Q03942 479 aa4.7□□□□□ -1.66
SDO1YLR022C RRP15Q06511 250 aaPredicted RBP4.7□□□□□ -1.66
SDO1YLR022C PUS7Q08647 676 aaKnown RBP4.7□□□□□ -1.66
SDO1YLR022C LPX1Q12405 387 aaKnown RBP4.7□□□□□ -1.66
SDO1YLR022C SPT7P35177 1332 aa4.7□□□□□ -1.66
SDO1YLR022C HEM13P11353 328 aaKnown RBP4.69□□□□□ -1.66
SDO1YLR022C TAF13P11747 167 aa4.69□□□□□ -1.66
SDO1YLR022C HSE1P38753 452 aa4.69□□□□□ -1.66
SDO1YLR022C PIC2P40035 300 aa4.69□□□□□ -1.66
SDO1YLR022C GTS1P40956 396 aa4.69□□□□□ -1.66
SDO1YLR022C ORC3P54790 616 aa4.69□□□□□ -1.66
SDO1YLR022C RSA3Q05942 220 aaKnown RBP4.69□□□□□ -1.66
SDO1YLR022C MCD1Q12158 566 aa4.69□□□□□ -1.66
SDO1YLR022C ATE1P16639 503 aa4.68□□□□□ -1.66
SDO1YLR022C RET1P22276 1149 aaKnown RBP4.68□□□□□ -1.66
SDO1YLR022C PRE9P23638 258 aaKnown RBP4.68□□□□□ -1.66
SDO1YLR022C ADD66P36040 267 aa4.68□□□□□ -1.66
SDO1YLR022C POL32P47110 350 aa4.68□□□□□ -1.66
SDO1YLR022C YJR107WP47145 328 aa4.68□□□□□ -1.66
SDO1YLR022C TPP1Q03796 238 aa4.68□□□□□ -1.66
SDO1YLR022C YLR257WQ06146 321 aaKnown RBP4.68□□□□□ -1.66
SDO1YLR022C HDA2Q06629 674 aa4.68□□□□□ -1.66
SDO1YLR022C HRK1Q08732 759 aaKnown RBP4.68□□□□□ -1.66
SDO1YLR022C LAP2Q10740 671 aa4.68□□□□□ -1.66
SDO1YLR022C NUP192P47054 1683 aa4.67□□□□□ -1.66
SDO1YLR022C RAD2P07276 1031 aa4.67□□□□□ -1.66
SDO1YLR022C CYC8P14922 966 aa4.67□□□□□ -1.66
SDO1YLR022C THI80P35202 319 aa4.67□□□□□ -1.66
SDO1YLR022C MGE1P38523 228 aa4.67□□□□□ -1.66
SDO1YLR022C FKS3Q04952 1785 aa4.66□□□□□ -1.66
SDO1YLR022C HEM3P28789 327 aa4.66□□□□□ -1.66
SDO1YLR022C AIM3P38266 947 aaKnown RBP4.66□□□□□ -1.66
SDO1YLR022C ATG14P38270 344 aa4.66□□□□□ -1.66
SDO1YLR022C MRPS18P42847 217 aa4.66□□□□□ -1.66
SDO1YLR022C VPS53P47061 822 aa4.66□□□□□ -1.66
SDO1YLR022C EST2Q06163 884 aa4.66□□□□□ -1.66
SDO1YLR022C YDL177CQ12257 170 aa4.66□□□□□ -1.66
SDO1YLR022C POM152P39685 1337 aa4.66□□□□□ -1.66
SDO1YLR022C CTT1P06115 562 aa4.65□□□□□ -1.67
SDO1YLR022C SAM35P14693 329 aa4.65□□□□□ -1.67
SDO1YLR022C AFG2P32794 780 aa4.65□□□□□ -1.67
SDO1YLR022C YKR075CP36155 307 aa4.65□□□□□ -1.67
SDO1YLR022C ETP1P38748 585 aaKnown RBP4.65□□□□□ -1.67
SDO1YLR022C QNS1P38795 714 aaKnown RBP4.65□□□□□ -1.67
SDO1YLR022C ENT3P47160 408 aa4.65□□□□□ -1.67
SDO1YLR022C SNF2P22082 1703 aa4.65□□□□□ -1.67
SDO1YLR022C ASF1P32447 279 aa4.64□□□□□ -1.67
SDO1YLR022C YKL133CP36066 463 aa4.64□□□□□ -1.67
SDO1YLR022C YHL012WP38709 493 aa4.64□□□□□ -1.67
SDO1YLR022C RPS26AP39938 119 aaKnown RBP4.64□□□□□ -1.67
SDO1YLR022C RPS26BP39939 119 aaKnown RBP4.64□□□□□ -1.67
SDO1YLR022C YJL045WP47052 634 aa4.64□□□□□ -1.67
SDO1YLR022C YNR063WP53749 607 aa4.64□□□□□ -1.67
SDO1YLR022C TAD3Q9URQ3 322 aa4.64□□□□□ -1.67
SDO1YLR022C PRP6P19735 899 aaPredicted RBP4.63□□□□□ -1.67
SDO1YLR022C MCM2P29469 868 aa4.63□□□□□ -1.67
SDO1YLR022C MDL2P33311 773 aa4.63□□□□□ -1.67
SDO1YLR022C FLR1P38124 548 aa4.63□□□□□ -1.67
SDO1YLR022C ENP1P38333 483 aaKnown RBP4.63□□□□□ -1.67
SDO1YLR022C FYV10P40492 516 aa4.63□□□□□ -1.67
SDO1YLR022C GNP1P48813 663 aa4.63□□□□□ -1.67
SDO1YLR022C MRPL22P53881 309 aa4.63□□□□□ -1.67
SDO1YLR022C SIW14P53965 281 aa4.63□□□□□ -1.67
SDO1YLR022C TOM1Q03280 3268 aa4.62□□□□□ -1.67
SDO1YLR022C SRO9P25567 434 aaKnown RBP4.62□□□□□ -1.67
SDO1YLR022C HXT13P39924 564 aa4.62□□□□□ -1.67
SDO1YLR022C HXT17P53631 564 aa4.62□□□□□ -1.67
SDO1YLR022C HXT15P54854 567 aa4.62□□□□□ -1.67
SDO1YLR022C YLR278CQ05854 1341 aa4.62□□□□□ -1.67
SDO1YLR022C YRF1-4O13559 1382 aa4.62□□□□□ -1.67
SDO1YLR022C YSC84P32793 468 aa4.61□□□□□ -1.67
SDO1YLR022C ALG3P38179 458 aa4.61□□□□□ -1.67
SDO1YLR022C RMD1Q03441 430 aa4.61□□□□□ -1.67
SDO1YLR022C SPR28Q04921 423 aa4.61□□□□□ -1.67
SDO1YLR022C ESF1Q06344 628 aaKnown RBP4.61□□□□□ -1.67
SDO1YLR022C PTC5Q12511 572 aa4.61□□□□□ -1.67
SDO1YLR022C MHP1P43638 1398 aa4.61□□□□□ -1.67
SDO1YLR022C KIP1P28742 1111 aa4.6□□□□□ -1.67
SDO1YLR022C SEC8P32855 1065 aa4.6□□□□□ -1.67
SDO1YLR022C ROD1Q02805 837 aa4.6□□□□□ -1.67
SDO1YLR022C TY4B-HP0C2J7 1802 aa4.6□□□□□ -1.67
SDO1YLR022C TY4B-JP47024 1803 aa4.6□□□□□ -1.67
SDO1YLR022C DED1P06634 604 aaKnown RBP4.59□□□□□ -1.67
SDO1YLR022C MKK2P32491 506 aa4.59□□□□□ -1.67
SDO1YLR022C TOD6P34219 525 aa4.59□□□□□ -1.67
SDO1YLR022C BAP2P38084 609 aa4.59□□□□□ -1.67
SDO1YLR022C KIN4Q01919 800 aa4.59□□□□□ -1.67
SDO1YLR022C RAT1Q02792 1006 aaKnown RBP4.59□□□□□ -1.67
SDO1YLR022C MRL1Q06815 381 aa4.59□□□□□ -1.67
SDO1YLR022C YPL260WQ08977 551 aa4.59□□□□□ -1.67
SDO1YLR022C BUG1Q12191 341 aa4.59□□□□□ -1.67
SDO1YLR022C THS1P04801 734 aaKnown RBP4.58□□□□□ -1.68
SDO1YLR022C GCR1P07261 785 aa4.58□□□□□ -1.68
SDO1YLR022C AIM26P32858 118 aa4.58□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 1004.5 ms