RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W VTC3Q02725 835 aa5.94□□□□□ -1.46
SPC97YHR172W TIM50Q02776 476 aa5.94□□□□□ -1.46
SPC97YHR172W YKU80Q04437 629 aa5.94□□□□□ -1.46
SPC97YHR172W ENT1Q12518 454 aa5.94□□□□□ -1.46
SPC97YHR172W SSM4P40318 1319 aa5.94□□□□□ -1.46
SPC97YHR172W TRP2P00899 507 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W RET1P22276 1149 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W UGA4P32837 571 aa5.93□□□□□ -1.46
SPC97YHR172W NIP100P33420 868 aa5.93□□□□□ -1.46
SPC97YHR172W RPA14P50106 137 aa5.93□□□□□ -1.46
SPC97YHR172W RIA1P53893 1110 aa5.93□□□□□ -1.46
SPC97YHR172W ULP1Q02724 621 aa5.93□□□□□ -1.46
SPC97YHR172W GSF2Q04697 403 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W RPC40P07703 335 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W PFK1P16861 987 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W POL4P25615 582 aa5.93□□□□□ -1.46
SPC97YHR172W CDC48P25694 835 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W IXR1P33417 597 aa5.93□□□□□ -1.46
SPC97YHR172W NOP16P40007 231 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W QRI7P43122 407 aa5.93□□□□□ -1.46
SPC97YHR172W UPF3P48412 387 aaKnown RBP5.93□□□□□ -1.46
SPC97YHR172W GYP1Q08484 637 aa5.93□□□□□ -1.46
SPC97YHR172W SMF3Q12078 473 aaPredicted RBP5.93□□□□□ -1.46
SPC97YHR172W TAH18Q12181 623 aa5.93□□□□□ -1.46
SPC97YHR172W CMK1P27466 446 aaKnown RBP5.92□□□□□ -1.46
SPC97YHR172W FUN30P31380 1131 aa5.92□□□□□ -1.46
SPC97YHR172W IRC6P43615 237 aa5.92□□□□□ -1.46
SPC97YHR172W SET2P46995 733 aaKnown RBP5.92□□□□□ -1.46
SPC97YHR172W ZDS2P54786 942 aa5.92□□□□□ -1.46
SPC97YHR172W ARA2Q04212 335 aa5.92□□□□□ -1.46
SPC97YHR172W YTM1Q12024 460 aaPredicted RBP5.92□□□□□ -1.46
SPC97YHR172W MRPL33P20084 86 aa5.92□□□□□ -1.46
SPC97YHR172W TRX1P22217 103 aaKnown RBP5.92□□□□□ -1.46
SPC97YHR172W PRP19P32523 503 aaKnown RBP5.92□□□□□ -1.46
SPC97YHR172W ORC2P32833 620 aa5.92□□□□□ -1.46
SPC97YHR172W AXL1P40851 1208 aa5.92□□□□□ -1.46
SPC97YHR172W GNP1P48813 663 aa5.92□□□□□ -1.46
SPC97YHR172W RNR4P49723 345 aaKnown RBP5.92□□□□□ -1.46
SPC97YHR172W SHE10P53075 577 aa5.92□□□□□ -1.46
SPC97YHR172W SYF1Q04048 859 aaPredicted RBP5.92□□□□□ -1.46
SPC97YHR172W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
SPC97YHR172W RPC53P25441 422 aa5.91□□□□□ -1.46
SPC97YHR172W PAH1P32567 862 aa5.91□□□□□ -1.46
SPC97YHR172W NPL6P32832 435 aa5.91□□□□□ -1.46
SPC97YHR172W CNS1P33313 385 aa5.91□□□□□ -1.46
SPC97YHR172W AMN1P38285 549 aaPredicted RBP5.91□□□□□ -1.46
SPC97YHR172W BFR1P38934 470 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SPC97YHR172W OAF1P39720 1047 aaPredicted RBP5.91□□□□□ -1.46
SPC97YHR172W ROG3P43602 733 aa5.91□□□□□ -1.46
SPC97YHR172W YJR096WP47137 282 aa5.91□□□□□ -1.46
SPC97YHR172W MET13P53128 600 aa5.91□□□□□ -1.46
SPC97YHR172W BNI4P53858 892 aa5.91□□□□□ -1.46
SPC97YHR172W RMP1Q12530 201 aa5.91□□□□□ -1.46
SPC97YHR172W AAC3P18238 307 aa5.91□□□□□ -1.46
SPC97YHR172W REC107P21651 314 aa5.91□□□□□ -1.46
SPC97YHR172W SIT1P39980 628 aa5.91□□□□□ -1.46
SPC97YHR172W BLS1Q06071 122 aa5.91□□□□□ -1.46
SPC97YHR172W ERF2Q06551 359 aa5.91□□□□□ -1.46
SPC97YHR172W RRP36Q12481 300 aaPredicted RBP5.91□□□□□ -1.46
SPC97YHR172W FLP1P03870 423 aa5.9□□□□□ -1.46
SPC97YHR172W DBF4P32325 704 aa5.9□□□□□ -1.46
SPC97YHR172W DAL1P32375 460 aa5.9□□□□□ -1.46
SPC97YHR172W LYP1P32487 611 aa5.9□□□□□ -1.46
SPC97YHR172W YEL1P34225 687 aa5.9□□□□□ -1.46
SPC97YHR172W MUD2P36084 527 aaKnown RBP5.9□□□□□ -1.46
SPC97YHR172W CCC2P38995 1004 aa5.9□□□□□ -1.46
SPC97YHR172W RTT105P40063 208 aa5.9□□□□□ -1.46
SPC97YHR172W RAD26P40352 1085 aa5.9□□□□□ -1.46
SPC97YHR172W XKS1P42826 600 aa5.9□□□□□ -1.46
SPC97YHR172W YAP1802P53309 568 aa5.9□□□□□ -1.46
SPC97YHR172W CWC21Q03375 135 aaKnown RBP5.9□□□□□ -1.46
SPC97YHR172W CIA1Q05583 330 aa5.9□□□□□ -1.46
SPC97YHR172W AVO1Q08236 1176 aa5.9□□□□□ -1.46
SPC97YHR172W SWI5P08153 709 aa5.9□□□□□ -1.47
SPC97YHR172W SRO9P25567 434 aaKnown RBP5.9□□□□□ -1.47
SPC97YHR172W DAL80P26343 269 aa5.9□□□□□ -1.47
SPC97YHR172W SEG2P34250 1132 aa5.9□□□□□ -1.47
SPC97YHR172W TIF4631P39935 952 aaKnown RBP5.9□□□□□ -1.47
SPC97YHR172W TPA1P40032 644 aaKnown RBP5.9□□□□□ -1.47
SPC97YHR172W SPO74P45819 413 aa5.9□□□□□ -1.47
SPC97YHR172W YLR225CQ05948 407 aaKnown RBP5.9□□□□□ -1.47
SPC97YHR172W HBN1Q96VH4 193 aa5.9□□□□□ -1.47
SPC97YHR172W SRD1P09007 221 aa5.89□□□□□ -1.47
SPC97YHR172W HEM12P32347 362 aaPredicted RBP5.89□□□□□ -1.47
SPC97YHR172W MDJ1P35191 511 aa5.89□□□□□ -1.47
SPC97YHR172W CKB2P38930 258 aa5.89□□□□□ -1.47
SPC97YHR172W RAD55P38953 406 aa5.89□□□□□ -1.47
SPC97YHR172W EMP65P40085 556 aa5.89□□□□□ -1.47
SPC97YHR172W PCL7P40186 285 aa5.89□□□□□ -1.47
SPC97YHR172W GZF3P42944 551 aaKnown RBP5.89□□□□□ -1.47
SPC97YHR172W VPS53P47061 822 aa5.89□□□□□ -1.47
SPC97YHR172W HST1P53685 503 aa5.89□□□□□ -1.47
SPC97YHR172W RGA2Q06407 1009 aa5.89□□□□□ -1.47
SPC97YHR172W RIX7Q07844 837 aaKnown RBP5.89□□□□□ -1.47
SPC97YHR172W RKM4Q12504 494 aa5.89□□□□□ -1.47
SPC97YHR172W MET8P15807 274 aa5.89□□□□□ -1.47
SPC97YHR172W SIS1P25294 352 aaKnown RBP5.89□□□□□ -1.47
SPC97YHR172W PCL2P25693 308 aa5.89□□□□□ -1.47
SPC97YHR172W BIT2P38346 545 aa5.89□□□□□ -1.47
SPC97YHR172W GCD10P41814 478 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms