RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	KRE33	P53914	1056 aa	Known RBP	4.65	□□□□□ -1.67
SLX8	YER116C	VTI1	Q04338	217 aa		4.65	□□□□□ -1.67
SLX8	YER116C	YMR018W	Q04364	514 aa		4.65	□□□□□ -1.67
SLX8	YER116C	YLR225C	Q05948	407 aa	Known RBP	4.65	□□□□□ -1.67
SLX8	YER116C	TRP2	P00899	507 aa	Known RBP	4.64	□□□□□ -1.67
SLX8	YER116C	TOM70	P07213	617 aa	Known RBP	4.64	□□□□□ -1.67
SLX8	YER116C	VBA3	P25594	458 aa		4.64	□□□□□ -1.67
SLX8	YER116C	IMP2'	P32351	346 aa		4.64	□□□□□ -1.67
SLX8	YER116C	RRP8	P38961	392 aa	Known RBP	4.64	□□□□□ -1.67
SLX8	YER116C	GPP2	P40106	250 aa	Known RBP	4.64	□□□□□ -1.67
SLX8	YER116C	MGS1	P40151	587 aa		4.64	□□□□□ -1.67
SLX8	YER116C	CNN1	P43618	361 aa		4.64	□□□□□ -1.67
SLX8	YER116C	BFA1	P47113	574 aa		4.64	□□□□□ -1.67
SLX8	YER116C	UBP15	P50101	1230 aa		4.64	□□□□□ -1.67
SLX8	YER116C	ATP22	P50273	684 aa	Predicted RBP	4.64	□□□□□ -1.67
SLX8	YER116C	YNR063W	P53749	607 aa		4.64	□□□□□ -1.67
SLX8	YER116C	SPN1	Q06505	410 aa	Predicted RBP	4.64	□□□□□ -1.67
SLX8	YER116C	MDM12	Q92328	271 aa		4.64	□□□□□ -1.67
SLX8	YER116C	HSP82	P02829	709 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	FLP1	P03870	423 aa		4.63	□□□□□ -1.67
SLX8	YER116C	NAT1	P12945	854 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	IDI1	P15496	288 aa		4.63	□□□□□ -1.67
SLX8	YER116C	PRP9	P19736	530 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	KRR1	P25586	316 aa	Predicted RBP	4.63	□□□□□ -1.67
SLX8	YER116C	AAD3	P25612	363 aa		4.63	□□□□□ -1.67
SLX8	YER116C	BEM3	P32873	1128 aa		4.63	□□□□□ -1.67
SLX8	YER116C	STO1	P34160	861 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	HXT5	P38695	592 aa		4.63	□□□□□ -1.67
SLX8	YER116C	CCT3	P39077	534 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	VPS8	P39702	1274 aa		4.63	□□□□□ -1.67
SLX8	YER116C	ERR3	P42222	437 aa		4.63	□□□□□ -1.67
SLX8	YER116C	PAP2	P53632	584 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	NAM8	Q00539	523 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	GTR1	Q00582	310 aa		4.63	□□□□□ -1.67
SLX8	YER116C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SLX8	YER116C	GRX3	Q03835	250 aa		4.63	□□□□□ -1.67
SLX8	YER116C	CMR1	Q12510	522 aa	Known RBP	4.63	□□□□□ -1.67
SLX8	YER116C	PHO81	P17442	1178 aa		4.62	□□□□□ -1.67
SLX8	YER116C	AEP2	P22136	580 aa		4.62	□□□□□ -1.67
SLX8	YER116C	GSY1	P23337	708 aa		4.62	□□□□□ -1.67
SLX8	YER116C	VMA3	P25515	160 aa		4.62	□□□□□ -1.67
SLX8	YER116C	PRP19	P32523	503 aa	Known RBP	4.62	□□□□□ -1.67
SLX8	YER116C	CCC2	P38995	1004 aa		4.62	□□□□□ -1.67
SLX8	YER116C	ACA1	P39970	489 aa		4.62	□□□□□ -1.67
SLX8	YER116C	MXR1	P40029	184 aa		4.62	□□□□□ -1.67
SLX8	YER116C	SGM1	P47166	707 aa		4.62	□□□□□ -1.67
SLX8	YER116C	NPY1	P53164	384 aa		4.62	□□□□□ -1.67
SLX8	YER116C	MEP3	P53390	489 aa		4.62	□□□□□ -1.67
SLX8	YER116C	CUZ1	P53899	274 aa		4.62	□□□□□ -1.67
SLX8	YER116C	YDR341C	Q05506	607 aa	Known RBP	4.62	□□□□□ -1.67
SLX8	YER116C	ISA1	Q07821	250 aa	Predicted RBP	4.62	□□□□□ -1.67
SLX8	YER116C	CLF1	Q12309	687 aa	Predicted RBP	4.62	□□□□□ -1.67
SLX8	YER116C	RAD18	P10862	487 aa		4.61	□□□□□ -1.67
SLX8	YER116C	TOP3	P13099	656 aa		4.61	□□□□□ -1.67
SLX8	YER116C	PFK1	P16861	987 aa	Known RBP	4.61	□□□□□ -1.67
SLX8	YER116C	TPM1	P17536	199 aa	Known RBP	4.61	□□□□□ -1.67
SLX8	YER116C	LYP1	P32487	611 aa		4.61	□□□□□ -1.67
SLX8	YER116C	SQT1	P35184	431 aa		4.61	□□□□□ -1.67
SLX8	YER116C	CEM1	P39525	442 aa		4.61	□□□□□ -1.67
SLX8	YER116C	GPD2	P41911	440 aa	Known RBP	4.61	□□□□□ -1.67
SLX8	YER116C	NIT2	P47016	307 aa		4.61	□□□□□ -1.67
SLX8	YER116C	YJR096W	P47137	282 aa		4.61	□□□□□ -1.67
SLX8	YER116C	GNP1	P48813	663 aa		4.61	□□□□□ -1.67
SLX8	YER116C	MET13	P53128	600 aa		4.61	□□□□□ -1.67
SLX8	YER116C	YNL058C	P53947	316 aa		4.61	□□□□□ -1.67
SLX8	YER116C	NSE5	Q03718	556 aa		4.61	□□□□□ -1.67
SLX8	YER116C	YDR286C	Q05530	114 aa		4.61	□□□□□ -1.67
SLX8	YER116C	OPY2	Q06810	360 aa		4.61	□□□□□ -1.67
SLX8	YER116C	TIF6	Q12522	245 aa	Known RBP	4.61	□□□□□ -1.67
SLX8	YER116C	HBN1	Q96VH4	193 aa		4.61	□□□□□ -1.67
SLX8	YER116C	AI1	P03875	834 aa		4.6	□□□□□ -1.67
SLX8	YER116C	FUR1	P18562	216 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	RAD53	P22216	821 aa		4.6	□□□□□ -1.67
SLX8	YER116C	DAL3	P32459	195 aa		4.6	□□□□□ -1.67
SLX8	YER116C	DPH2	P32461	534 aa		4.6	□□□□□ -1.67
SLX8	YER116C	UTR2	P32623	467 aa		4.6	□□□□□ -1.67
SLX8	YER116C	SMY2	P32909	740 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	RER2	P35196	286 aa		4.6	□□□□□ -1.67
SLX8	YER116C	IRS4	P36115	615 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	NOP4	P37838	685 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	TBS1	P38114	1094 aa		4.6	□□□□□ -1.67
SLX8	YER116C	AMN1	P38285	549 aa	Predicted RBP	4.6	□□□□□ -1.67
SLX8	YER116C	UBS1	P38290	277 aa		4.6	□□□□□ -1.67
SLX8	YER116C	BCD1	P38772	366 aa		4.6	□□□□□ -1.67
SLX8	YER116C	MBP1	P39678	833 aa		4.6	□□□□□ -1.67
SLX8	YER116C	SAH1	P39954	449 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	FIR1	P40020	876 aa		4.6	□□□□□ -1.67
SLX8	YER116C	PSY2	P40164	858 aa		4.6	□□□□□ -1.67
SLX8	YER116C	RGD2	P43556	714 aa		4.6	□□□□□ -1.67
SLX8	YER116C	DUG1	P43616	481 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	RSM26	P47141	266 aa		4.6	□□□□□ -1.67
SLX8	YER116C	HEL2	Q05580	639 aa	Known RBP	4.6	□□□□□ -1.67
SLX8	YER116C	SDH5	Q08230	162 aa		4.6	□□□□□ -1.67
SLX8	YER116C	WTM2	Q12206	467 aa		4.6	□□□□□ -1.67
SLX8	YER116C	SPO21	Q12411	609 aa		4.6	□□□□□ -1.67
SLX8	YER116C	YDR461C-A	Q2V2P7	80 aa		4.6	□□□□□ -1.67
SLX8	YER116C	DAT1	P13483	248 aa	Known RBP	4.59	□□□□□ -1.67
SLX8	YER116C	DIT1	P21623	536 aa		4.59	□□□□□ -1.67
SLX8	YER116C	SAN1	P22470	610 aa		4.59	□□□□□ -1.67
SLX8	YER116C	AHP1	P38013	176 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 121.1 ms