RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UME6	YDR207C	TMA22	P47089	198 aa	Predicted RBP	11.49	□□□□□ -0.57
UME6	YDR207C	DCS1	Q06151	350 aa		11.49	□□□□□ -0.57
UME6	YDR207C	RIB2	Q12362	591 aa	Known RBP	11.49	□□□□□ -0.57
UME6	YDR207C	CEX1	Q12453	761 aa		11.49	□□□□□ -0.57
UME6	YDR207C	STE5	P32917	917 aa		11.48	□□□□□ -0.57
UME6	YDR207C	FES1	P38260	290 aa		11.48	□□□□□ -0.57
UME6	YDR207C	JIP5	Q06214	492 aa	Predicted RBP	11.48	□□□□□ -0.57
UME6	YDR207C	LSO2	Q3E772	92 aa	Known RBP	11.48	□□□□□ -0.57
UME6	YDR207C	YML002W	P0CF17	737 aa		11.48	□□□□□ -0.57
UME6	YDR207C	FUS1	P11710	512 aa		11.48	□□□□□ -0.57
UME6	YDR207C	PEP7	P32609	515 aa		11.48	□□□□□ -0.57
UME6	YDR207C	ZDS1	P50111	915 aa	Known RBP	11.48	□□□□□ -0.57
UME6	YDR207C	DIP5	P53388	608 aa		11.48	□□□□□ -0.57
UME6	YDR207C	RTC4	P53850	401 aa		11.48	□□□□□ -0.57
UME6	YDR207C	YOL036W	Q08206	761 aa		11.48	□□□□□ -0.57
UME6	YDR207C	CLP1	Q08685	445 aa	Predicted RBP	11.48	□□□□□ -0.57
UME6	YDR207C	OSW1	Q08692	278 aa		11.48	□□□□□ -0.57
UME6	YDR207C	NOT5	Q12514	560 aa	Predicted RBP	11.48	□□□□□ -0.57
UME6	YDR207C	CDC16	P09798	840 aa		11.47	□□□□□ -0.57
UME6	YDR207C	PHO84	P25297	587 aa	Known RBP	11.47	□□□□□ -0.57
UME6	YDR207C	BMH1	P29311	267 aa	Known RBP	11.47	□□□□□ -0.57
UME6	YDR207C	UTP11	P34247	250 aa	Predicted RBP	11.47	□□□□□ -0.57
UME6	YDR207C	BMH2	P34730	273 aa	Known RBP	11.47	□□□□□ -0.57
UME6	YDR207C	YNG2	P38806	282 aa	Known RBP	11.47	□□□□□ -0.57
UME6	YDR207C	SMF1	P38925	575 aa		11.47	□□□□□ -0.57
UME6	YDR207C	CTF18	P49956	741 aa		11.47	□□□□□ -0.57
UME6	YDR207C	ELA1	P53861	379 aa	Predicted RBP	11.47	□□□□□ -0.57
UME6	YDR207C	RMD1	Q03441	430 aa		11.47	□□□□□ -0.57
UME6	YDR207C	PDC1	P06169	563 aa	Known RBP	11.47	□□□□□ -0.57
UME6	YDR207C	SEC2	P17065	759 aa		11.47	□□□□□ -0.57
UME6	YDR207C	PEX18	P38855	283 aa		11.47	□□□□□ -0.57
UME6	YDR207C	SNX4	P47057	423 aa		11.47	□□□□□ -0.57
UME6	YDR207C	RTS3	P53289	263 aa		11.47	□□□□□ -0.57
UME6	YDR207C	DCP2	P53550	970 aa	Known RBP	11.47	□□□□□ -0.57
UME6	YDR207C	ULP1	Q02724	621 aa		11.47	□□□□□ -0.57
UME6	YDR207C	COA4	Q05809	96 aa		11.47	□□□□□ -0.57
UME6	YDR207C	OSM1	P21375	501 aa	Known RBP	11.46	□□□□□ -0.57
UME6	YDR207C	SWD1	P39706	426 aa		11.46	□□□□□ -0.57
UME6	YDR207C	NNT1	Q05874	261 aa		11.46	□□□□□ -0.57
UME6	YDR207C	NSE1	Q07913	336 aa		11.46	□□□□□ -0.57
UME6	YDR207C	ENO1	P00924	437 aa	Known RBP	11.46	□□□□□ -0.58
UME6	YDR207C	CPA2	P03965	1118 aa	Known RBP	11.46	□□□□□ -0.58
UME6	YDR207C	RTS1	P38903	757 aa		11.46	□□□□□ -0.58
UME6	YDR207C	IOC3	P43596	787 aa		11.46	□□□□□ -0.58
UME6	YDR207C	VPS38	Q05919	439 aa		11.46	□□□□□ -0.58
UME6	YDR207C	NUR1	Q12066	484 aa		11.46	□□□□□ -0.58
UME6	YDR207C	SCM3	Q12334	223 aa		11.46	□□□□□ -0.58
UME6	YDR207C	SSK22	P25390	1331 aa	Predicted RBP	11.45	□□□□□ -0.58
UME6	YDR207C	PRP22	P24384	1145 aa	Known RBP	11.45	□□□□□ -0.58
UME6	YDR207C	GDA1	P32621	518 aa		11.45	□□□□□ -0.58
UME6	YDR207C	STE13	P33894	931 aa		11.45	□□□□□ -0.58
UME6	YDR207C	BUD16	P39988	312 aa		11.45	□□□□□ -0.58
UME6	YDR207C	LAM5	P43560	674 aa		11.45	□□□□□ -0.58
UME6	YDR207C	ALF1	P53904	254 aa		11.45	□□□□□ -0.58
UME6	YDR207C	SOG2	Q08817	791 aa		11.45	□□□□□ -0.58
UME6	YDR207C	RKM1	Q08961	583 aa	Predicted RBP	11.45	□□□□□ -0.58
UME6	YDR207C	OCA4	P25366	362 aa		11.45	□□□□□ -0.58
UME6	YDR207C	BUD23	P25627	275 aa	Predicted RBP	11.45	□□□□□ -0.58
UME6	YDR207C	VPH2	P32341	215 aa		11.45	□□□□□ -0.58
UME6	YDR207C	CCC2	P38995	1004 aa		11.45	□□□□□ -0.58
UME6	YDR207C	PXA1	P41909	870 aa		11.45	□□□□□ -0.58
UME6	YDR207C	YGL176C	P46945	554 aa		11.45	□□□□□ -0.58
UME6	YDR207C	ATG17	Q06410	417 aa		11.45	□□□□□ -0.58
UME6	YDR207C	NOP6	Q07623	225 aa	Known RBP	11.45	□□□□□ -0.58
UME6	YDR207C	PDE2	P06776	526 aa		11.44	□□□□□ -0.58
UME6	YDR207C	LPD1	P09624	499 aa	Known RBP	11.44	□□□□□ -0.58
UME6	YDR207C	PLC1	P32383	869 aa		11.44	□□□□□ -0.58
UME6	YDR207C	FCY21	P40039	528 aa		11.44	□□□□□ -0.58
UME6	YDR207C	PHB1	P40961	287 aa		11.44	□□□□□ -0.58
UME6	YDR207C	ALB1	P47019	175 aa	Predicted RBP	11.44	□□□□□ -0.58
UME6	YDR207C	MCM6	P53091	1017 aa	Known RBP	11.44	□□□□□ -0.58
UME6	YDR207C	PRP43	P53131	767 aa	Known RBP	11.44	□□□□□ -0.58
UME6	YDR207C	ALR1	Q08269	859 aa		11.44	□□□□□ -0.58
UME6	YDR207C	HEM1	P09950	548 aa	Predicted RBP	11.44	□□□□□ -0.58
UME6	YDR207C	APL1	P27351	700 aa		11.44	□□□□□ -0.58
UME6	YDR207C	KIP1	P28742	1111 aa		11.44	□□□□□ -0.58
UME6	YDR207C	IFA38	P38286	347 aa		11.44	□□□□□ -0.58
UME6	YDR207C	AIM9	P40053	627 aa	Known RBP	11.44	□□□□□ -0.58
UME6	YDR207C	SRB7	P47822	140 aa		11.44	□□□□□ -0.58
UME6	YDR207C	PNG1	Q02890	363 aa		11.44	□□□□□ -0.58
UME6	YDR207C	SNU66	Q12420	587 aa	Predicted RBP	11.44	□□□□□ -0.58
UME6	YDR207C	ADY2	P25613	283 aa		11.43	□□□□□ -0.58
UME6	YDR207C	AFG2	P32794	780 aa		11.43	□□□□□ -0.58
UME6	YDR207C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	11.43	□□□□□ -0.58	RIP-Chip
UME6	YDR207C	YML082W	Q04533	649 aa	Known RBP	11.43	□□□□□ -0.58
UME6	YDR207C	RMP1	Q12530	201 aa		11.43	□□□□□ -0.58
UME6	YDR207C	PRP6	P19735	899 aa	Predicted RBP	11.43	□□□□□ -0.58
UME6	YDR207C	UBA1	P22515	1024 aa	Known RBP	11.43	□□□□□ -0.58
UME6	YDR207C	PYC2	P32327	1180 aa	Known RBP	11.43	□□□□□ -0.58
UME6	YDR207C	YPT11	P48559	417 aa		11.43	□□□□□ -0.58
UME6	YDR207C	BRO1	P48582	844 aa		11.43	□□□□□ -0.58
UME6	YDR207C	FAP7	Q12055	197 aa	Predicted RBP	11.43	□□□□□ -0.58
UME6	YDR207C	YIL002W-A	Q3E7Z5	69 aa		11.43	□□□□□ -0.58
UME6	YDR207C	IML1	P47170	1584 aa		11.43	□□□□□ -0.58
UME6	YDR207C	RPO21	P04050	1733 aa	Known RBP	11.42	□□□□□ -0.58
UME6	YDR207C	REC107	P21651	314 aa		11.42	□□□□□ -0.58
UME6	YDR207C	RPA135	P22138	1203 aa	Known RBP	11.42	□□□□□ -0.58
UME6	YDR207C	PHO3	P24031	467 aa		11.42	□□□□□ -0.58
UME6	YDR207C	DPB2	P24482	689 aa	Predicted RBP	11.42	□□□□□ -0.58
UME6	YDR207C	YJU2	P28320	278 aa	Predicted RBP	11.42	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms