RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C CDC55Q00362 526 aa6.26□□□□□ -1.41
PDB1YBR221C KIN4Q01919 800 aa6.26□□□□□ -1.41
PDB1YBR221C HEH2Q03281 663 aa6.26□□□□□ -1.41
PDB1YBR221C SPO71Q03868 1245 aa6.26□□□□□ -1.41
PDB1YBR221C YMR018WQ04364 514 aa6.26□□□□□ -1.41
PDB1YBR221C HFD1Q04458 532 aa6.26□□□□□ -1.41
PDB1YBR221C SGD1Q06132 899 aa6.26□□□□□ -1.41
PDB1YBR221C CSC1Q06538 782 aa6.26□□□□□ -1.41
PDB1YBR221C YPR097WQ06839 1073 aa6.26□□□□□ -1.41
PDB1YBR221C SDH5Q08230 162 aa6.26□□□□□ -1.41
PDB1YBR221C ALR1Q08269 859 aa6.26□□□□□ -1.41
PDB1YBR221C LAP2Q10740 671 aa6.26□□□□□ -1.41
PDB1YBR221C GRE2Q12068 342 aaKnown RBP6.26□□□□□ -1.41
PDB1YBR221C MCD1Q12158 566 aa6.26□□□□□ -1.41
PDB1YBR221C PDI1P17967 522 aaKnown RBP6.25□□□□□ -1.41
PDB1YBR221C GAP1P19145 602 aaPredicted RBP6.25□□□□□ -1.41
PDB1YBR221C SUI2P20459 304 aaKnown RBP6.25□□□□□ -1.41
PDB1YBR221C PGS1P25578 521 aa6.25□□□□□ -1.41
PDB1YBR221C ERT1P38140 529 aa6.25□□□□□ -1.41
PDB1YBR221C BCD1P38772 366 aa6.25□□□□□ -1.41
PDB1YBR221C HXT8P40886 569 aa6.25□□□□□ -1.41
PDB1YBR221C KEL2P50090 882 aa6.25□□□□□ -1.41
PDB1YBR221C CWH41P53008 833 aa6.25□□□□□ -1.41
PDB1YBR221C TAN1P53072 289 aaPredicted RBP6.25□□□□□ -1.41
PDB1YBR221C ERP6P53198 216 aa6.25□□□□□ -1.41
PDB1YBR221C YNL011CP53980 444 aa6.25□□□□□ -1.41
PDB1YBR221C VTC3Q02725 835 aa6.25□□□□□ -1.41
PDB1YBR221C ATG20Q07528 640 aa6.25□□□□□ -1.41
PDB1YBR221C SCM3Q12334 223 aa6.25□□□□□ -1.41
PDB1YBR221C MHP1P43638 1398 aa6.25□□□□□ -1.41
PDB1YBR221C FKS3Q04952 1785 aa6.25□□□□□ -1.41
PDB1YBR221C MRP7P12687 371 aa6.24□□□□□ -1.41
PDB1YBR221C TRM1P15565 570 aaKnown RBP6.24□□□□□ -1.41
PDB1YBR221C APA1P16550 321 aaKnown RBP6.24□□□□□ -1.41
PDB1YBR221C BAS1P22035 811 aa6.24□□□□□ -1.41
PDB1YBR221C PRE9P23638 258 aaKnown RBP6.24□□□□□ -1.41
PDB1YBR221C DUT1P33317 147 aa6.24□□□□□ -1.41
PDB1YBR221C NPL4P33755 580 aa6.24□□□□□ -1.41
PDB1YBR221C SOH1P38633 127 aa6.24□□□□□ -1.41
PDB1YBR221C YHL041WP38730 149 aa6.24□□□□□ -1.41
PDB1YBR221C FAA3P39002 694 aa6.24□□□□□ -1.41
PDB1YBR221C JEM1P40358 645 aa6.24□□□□□ -1.41
PDB1YBR221C RRT14P40470 206 aa6.24□□□□□ -1.41
PDB1YBR221C HSV2P50079 448 aaPredicted RBP6.24□□□□□ -1.41
PDB1YBR221C OCA1P50946 238 aaPredicted RBP6.24□□□□□ -1.41
PDB1YBR221C YML6P51998 286 aa6.24□□□□□ -1.41
PDB1YBR221C SDA1P53313 767 aaKnown RBP6.24□□□□□ -1.41
PDB1YBR221C VPS30Q02948 557 aa6.24□□□□□ -1.41
PDB1YBR221C STE20Q03497 939 aaKnown RBP6.24□□□□□ -1.41
PDB1YBR221C YMR111CQ04461 462 aaPredicted RBP6.24□□□□□ -1.41
PDB1YBR221C TOS4Q06266 489 aa6.24□□□□□ -1.41
PDB1YBR221C YLH47Q06493 454 aa6.24□□□□□ -1.41
PDB1YBR221C RSC58Q07979 502 aa6.24□□□□□ -1.41
PDB1YBR221C FMP25Q08023 583 aa6.24□□□□□ -1.41
PDB1YBR221C BDS1Q08347 646 aa6.24□□□□□ -1.41
PDB1YBR221C TOM1Q03280 3268 aa6.24□□□□□ -1.41
PDB1YBR221C CMP2P14747 604 aa6.23□□□□□ -1.41
PDB1YBR221C KCC4P25389 1037 aa6.23□□□□□ -1.41
PDB1YBR221C ARE1P25628 610 aa6.23□□□□□ -1.41
PDB1YBR221C UGA3P26370 528 aa6.23□□□□□ -1.41
PDB1YBR221C SUV3P32580 737 aa6.23□□□□□ -1.41
PDB1YBR221C NIP100P33420 868 aa6.23□□□□□ -1.41
PDB1YBR221C LRP1P38801 184 aaKnown RBP6.23□□□□□ -1.41
PDB1YBR221C RSC8P43609 557 aaKnown RBP6.23□□□□□ -1.41
PDB1YBR221C SAE2P46946 345 aa6.23□□□□□ -1.41
PDB1YBR221C STR2P47164 639 aa6.23□□□□□ -1.41
PDB1YBR221C RTA1P53047 317 aa6.23□□□□□ -1.41
PDB1YBR221C SNP1Q00916 300 aaPredicted RBP6.23□□□□□ -1.41
PDB1YBR221C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
PDB1YBR221C RNH1Q04740 348 aa6.23□□□□□ -1.41
PDB1YBR221C FRA1Q07825 749 aa6.23□□□□□ -1.41
PDB1YBR221C NOC3Q07896 663 aaPredicted RBP6.23□□□□□ -1.41
PDB1YBR221C APC11Q12157 165 aa6.23□□□□□ -1.41
PDB1YBR221C SPO21Q12411 609 aa6.23□□□□□ -1.41
PDB1YBR221C YLR419WQ06698 1435 aaKnown RBP6.23□□□□□ -1.41
PDB1YBR221C RPO41P13433 1351 aaKnown RBP6.22□□□□□ -1.41
PDB1YBR221C STF1P01098 86 aa6.22□□□□□ -1.41
PDB1YBR221C SES1P07284 462 aaKnown RBP6.22□□□□□ -1.41
PDB1YBR221C GLK1P17709 500 aaKnown RBP6.22□□□□□ -1.41
PDB1YBR221C FUR1P18562 216 aaKnown RBP6.22□□□□□ -1.41
PDB1YBR221C BAP2P38084 609 aa6.22□□□□□ -1.41
PDB1YBR221C SRP72P38688 640 aaKnown RBP6.22□□□□□ -1.41
PDB1YBR221C ACA1P39970 489 aa6.22□□□□□ -1.41
PDB1YBR221C YFL034WP43564 1073 aa6.22□□□□□ -1.41
PDB1YBR221C PTA1Q01329 785 aaPredicted RBP6.22□□□□□ -1.41
PDB1YBR221C RSC4Q02206 625 aa6.22□□□□□ -1.41
PDB1YBR221C CWC21Q03375 135 aaKnown RBP6.22□□□□□ -1.41
PDB1YBR221C EAF1Q06337 982 aa6.22□□□□□ -1.41
PDB1YBR221C SIR4P11978 1358 aa6.21□□□□□ -1.41
PDB1YBR221C TUF1P02992 437 aaKnown RBP6.21□□□□□ -1.42
PDB1YBR221C RPP1BP10622 106 aaKnown RBP6.21□□□□□ -1.42
PDB1YBR221C SPO16P17122 198 aa6.21□□□□□ -1.42
PDB1YBR221C GUT2P32191 649 aa6.21□□□□□ -1.42
PDB1YBR221C MRP8P35719 219 aa6.21□□□□□ -1.42
PDB1YBR221C KTR4P38131 464 aa6.21□□□□□ -1.42
PDB1YBR221C SLI15P38283 698 aa6.21□□□□□ -1.42
PDB1YBR221C BFR1P38934 470 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42 RIP-Chip
PDB1YBR221C GPP2P40106 250 aaKnown RBP6.21□□□□□ -1.42
PDB1YBR221C IRR1P40541 1150 aa6.21□□□□□ -1.42
PDB1YBR221C HIS6P40545 261 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms