RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W KIP1P28742 1111 aa2.71□□□□□ -1.98
SNC1YAL030W AFR1P33304 620 aa2.71□□□□□ -1.98
SNC1YAL030W SLA2P33338 968 aa2.71□□□□□ -1.98
SNC1YAL030W YKR078WP36158 585 aaKnown RBP2.71□□□□□ -1.98
SNC1YAL030W ALG14P38242 237 aa2.71□□□□□ -1.98
SNC1YAL030W YBR238CP38330 731 aaKnown RBP2.71□□□□□ -1.98
SNC1YAL030W TPM2P40414 161 aa2.71□□□□□ -1.98
SNC1YAL030W ALG2P43636 503 aa2.71□□□□□ -1.98
SNC1YAL030W HLJ1P48353 224 aa2.71□□□□□ -1.98
SNC1YAL030W YNR063WP53749 607 aa2.71□□□□□ -1.98
SNC1YAL030W MTC5Q03897 1148 aa2.71□□□□□ -1.98
SNC1YAL030W DOT1Q04089 582 aaKnown RBP2.71□□□□□ -1.98
SNC1YAL030W ACM1Q08981 209 aa2.71□□□□□ -1.98
SNC1YAL030W ALG6Q12001 544 aaKnown RBP2.71□□□□□ -1.98
SNC1YAL030W DPH6Q12429 685 aa2.71□□□□□ -1.98
SNC1YAL030W NHA1Q99271 985 aa2.71□□□□□ -1.98
SNC1YAL030W ADE8P04161 214 aa2.7□□□□□ -1.98
SNC1YAL030W RAD53P22216 821 aa2.7□□□□□ -1.98
SNC1YAL030W RET1P22276 1149 aaKnown RBP2.7□□□□□ -1.98
SNC1YAL030W PPH3P32345 308 aa2.7□□□□□ -1.98
SNC1YAL030W SPC29P33419 253 aa2.7□□□□□ -1.98
SNC1YAL030W BAP2P38084 609 aa2.7□□□□□ -1.98
SNC1YAL030W MGS1P40151 587 aa2.7□□□□□ -1.98
SNC1YAL030W CCM1P48237 864 aaPredicted RBP2.7□□□□□ -1.98
SNC1YAL030W YGR237CP50089 785 aa2.7□□□□□ -1.98
SNC1YAL030W ALT1P52893 592 aa2.7□□□□□ -1.98
SNC1YAL030W KIP3P53086 805 aaKnown RBP2.7□□□□□ -1.98
SNC1YAL030W ELA1P53861 379 aaPredicted RBP2.7□□□□□ -1.98
SNC1YAL030W UME1Q03010 460 aa2.7□□□□□ -1.98
SNC1YAL030W ATP25Q03153 612 aa2.7□□□□□ -1.98
SNC1YAL030W SNF5P18480 905 aa2.69□□□□□ -1.98
SNC1YAL030W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
SNC1YAL030W DBP2P24783 546 aaKnown RBP2.69□□□□□ -1.98
SNC1YAL030W VBA3P25594 458 aa2.69□□□□□ -1.98
SNC1YAL030W PRO1P32264 428 aa2.69□□□□□ -1.98
SNC1YAL030W RPC82P32349 654 aa2.69□□□□□ -1.98
SNC1YAL030W SFA1P32771 386 aa2.69□□□□□ -1.98
SNC1YAL030W REC104P33323 182 aa2.69□□□□□ -1.98
SNC1YAL030W EMC3P36039 253 aa2.69□□□□□ -1.98
SNC1YAL030W GRX7P38068 203 aa2.69□□□□□ -1.98
SNC1YAL030W YBR284WP38150 797 aa2.69□□□□□ -1.98
SNC1YAL030W PIK1P39104 1066 aa2.69□□□□□ -1.98
SNC1YAL030W DSS1P39112 969 aa2.69□□□□□ -1.98
SNC1YAL030W TOK1P40310 691 aa2.69□□□□□ -1.98
SNC1YAL030W SEC26P41810 973 aaKnown RBP2.69□□□□□ -1.98
SNC1YAL030W YJL045WP47052 634 aa2.69□□□□□ -1.98
SNC1YAL030W GYP7P48365 746 aa2.69□□□□□ -1.98
SNC1YAL030W SDA1P53313 767 aaKnown RBP2.69□□□□□ -1.98
SNC1YAL030W TNA1P53322 534 aa2.69□□□□□ -1.98
SNC1YAL030W NCE103P53615 221 aa2.69□□□□□ -1.98
SNC1YAL030W HRQ1Q05549 1077 aa2.69□□□□□ -1.98
SNC1YAL030W THI73Q07904 523 aa2.69□□□□□ -1.98
SNC1YAL030W YOL057WQ08225 711 aa2.69□□□□□ -1.98
SNC1YAL030W THI72Q08579 599 aa2.69□□□□□ -1.98
SNC1YAL030W YPR071WQ12346 211 aa2.69□□□□□ -1.98
SNC1YAL030W TY1A-NL1Q12391 440 aaKnown RBP2.69□□□□□ -1.98
SNC1YAL030W COQ4O13525 335 aa2.68□□□□□ -1.98
SNC1YAL030W SRD1P09007 221 aa2.68□□□□□ -1.98
SNC1YAL030W NPP1P25353 742 aa2.68□□□□□ -1.98
SNC1YAL030W PCL2P25693 308 aa2.68□□□□□ -1.98
SNC1YAL030W FUN30P31380 1131 aa2.68□□□□□ -1.98
SNC1YAL030W YSC84P32793 468 aa2.68□□□□□ -1.98
SNC1YAL030W MTC2P34246 357 aa2.68□□□□□ -1.98
SNC1YAL030W MDJ1P35191 511 aa2.68□□□□□ -1.98
SNC1YAL030W UGA2P38067 497 aa2.68□□□□□ -1.98
SNC1YAL030W YRO2P38079 344 aa2.68□□□□□ -1.98
SNC1YAL030W CCZ1P38273 704 aa2.68□□□□□ -1.98
SNC1YAL030W TSL1P38427 1098 aaKnown RBP2.68□□□□□ -1.98
SNC1YAL030W GPB2P39717 880 aa2.68□□□□□ -1.98
SNC1YAL030W SAH1P39954 449 aaKnown RBP2.68□□□□□ -1.98
SNC1YAL030W MXR1P40029 184 aa2.68□□□□□ -1.98
SNC1YAL030W ICP55P40051 511 aa2.68□□□□□ -1.98
SNC1YAL030W RRT14P40470 206 aa2.68□□□□□ -1.98
SNC1YAL030W CAF16P43569 289 aa2.68□□□□□ -1.98
SNC1YAL030W GYP8P43570 497 aa2.68□□□□□ -1.98
SNC1YAL030W YKE2P52553 114 aa2.68□□□□□ -1.98
SNC1YAL030W GPG1P53130 126 aa2.68□□□□□ -1.98
SNC1YAL030W DAM1P53267 343 aa2.68□□□□□ -1.98
SNC1YAL030W YGR283CP53336 341 aaPredicted RBP2.68□□□□□ -1.98
SNC1YAL030W SUB1P54000 292 aaKnown RBP2.68□□□□□ -1.98
SNC1YAL030W HOS3Q02959 697 aaKnown RBP2.68□□□□□ -1.98
SNC1YAL030W MDM38Q08179 573 aa2.68□□□□□ -1.98
SNC1YAL030W PUS7Q08647 676 aaKnown RBP2.68□□□□□ -1.98
SNC1YAL030W TMA17Q12513 150 aa2.68□□□□□ -1.98
SNC1YAL030W CDC9P04819 755 aa2.67□□□□□ -1.98
SNC1YAL030W SRO9P25567 434 aaKnown RBP2.67□□□□□ -1.98
SNC1YAL030W STO1P34160 861 aaKnown RBP2.67□□□□□ -1.98
SNC1YAL030W YKL151CP36059 337 aa2.67□□□□□ -1.98
SNC1YAL030W RRM3P38766 723 aa2.67□□□□□ -1.98
SNC1YAL030W YER158CP40095 573 aa2.67□□□□□ -1.98
SNC1YAL030W NIT3P49954 291 aa2.67□□□□□ -1.98
SNC1YAL030W PEX8P53248 589 aa2.67□□□□□ -1.98
SNC1YAL030W FOL1P53848 824 aa2.67□□□□□ -1.98
SNC1YAL030W HFD1Q04458 532 aa2.67□□□□□ -1.98
SNC1YAL030W REH1Q06709 432 aa2.67□□□□□ -1.98
SNC1YAL030W ENV7Q12003 364 aa2.67□□□□□ -1.98
SNC1YAL030W FAP7Q12055 197 aaPredicted RBP2.67□□□□□ -1.98
SNC1YAL030W TMA7Q3E764 64 aaKnown RBP2.67□□□□□ -1.98
SNC1YAL030W AI1P03875 834 aa2.66□□□□□ -1.98
SNC1YAL030W AI3P03877 415 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms