RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 RFC4P35249 363 aa21.79■■□□□ 1.08
RGPD1-205ENST00000641339 TEX13AQ9BXU3 409 aaPredicted RBP21.79■■□□□ 1.08
RGPD1-205ENST00000641339 RRP7AQ9Y3A4 280 aaKnown RBP21.79■■□□□ 1.08
RGPD1-205ENST00000641339 UTRNP46939 3433 aa21.79■■□□□ 1.08
RGPD1-205ENST00000641339 SOS1Q07889 1333 aaPredicted RBP21.79■■□□□ 1.08
RGPD1-205ENST00000641339 DLG5Q8TDM6 1919 aa21.78■■□□□ 1.08
RGPD1-205ENST00000641339 PRAMEF22A3QJZ6 481 aa21.78■■□□□ 1.08
RGPD1-205ENST00000641339 STARD3NLO95772 234 aa21.78■■□□□ 1.08
RGPD1-205ENST00000641339 GYS1P13807 737 aa21.78■■□□□ 1.08
RGPD1-205ENST00000641339 TRIM35Q9UPQ4 493 aa21.77■■□□□ 1.08
RGPD1-205ENST00000641339 USP16Q9Y5T5 823 aa21.77■■□□□ 1.08
RGPD1-205ENST00000641339 NEUROD2Q15784 382 aa21.76■■□□□ 1.07
RGPD1-205ENST00000641339 PNISRQ8TF01 805 aaKnown RBP21.76■■□□□ 1.07
RGPD1-205ENST00000641339 SRP68Q9UHB9 627 aaKnown RBP21.76■■□□□ 1.07
RGPD1-205ENST00000641339 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
RGPD1-205ENST00000641339 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
RGPD1-205ENST00000641339 USP42Q9H9J4 1324 aaKnown RBP21.75■■□□□ 1.07
RGPD1-205ENST00000641339 A1BGP04217 495 aa21.74■■□□□ 1.07
RGPD1-205ENST00000641339 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
RGPD1-205ENST00000641339 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
RGPD1-205ENST00000641339 MMP10P09238 476 aa21.73■■□□□ 1.07
RGPD1-205ENST00000641339 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
RGPD1-205ENST00000641339 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
RGPD1-205ENST00000641339 FKBP8Q14318 412 aa21.72■■□□□ 1.07
RGPD1-205ENST00000641339 NLGN2Q8NFZ4 835 aa21.72■■□□□ 1.07
RGPD1-205ENST00000641339 CHD4Q14839 1912 aa21.72■■□□□ 1.07
RGPD1-205ENST00000641339 COL15A1P39059 1388 aa21.72■■□□□ 1.07
RGPD1-205ENST00000641339 APAF1O14727 1248 aa21.71■■□□□ 1.07
RGPD1-205ENST00000641339 NARFQ9UHQ1 456 aa21.71■■□□□ 1.07
RGPD1-205ENST00000641339 C4AP0C0L4 1744 aa21.7■■□□□ 1.06
RGPD1-205ENST00000641339 GIGYF1O75420 1035 aaPredicted RBP21.7■■□□□ 1.06
RGPD1-205ENST00000641339 USPL1Q5W0Q7 1092 aa21.7■■□□□ 1.06
RGPD1-205ENST00000641339 BABAM1Q9NWV8 329 aa21.7■■□□□ 1.06
RGPD1-205ENST00000641339 CD2APQ9Y5K6 639 aa21.7■■□□□ 1.06
RGPD1-205ENST00000641339 ZPR1O75312 459 aa21.69■■□□□ 1.06
RGPD1-205ENST00000641339 IL6STP40189 918 aaPredicted RBP21.69■■□□□ 1.06
RGPD1-205ENST00000641339 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
RGPD1-205ENST00000641339 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
RGPD1-205ENST00000641339 TM4SF1P30408 202 aa21.68■■□□□ 1.06
RGPD1-205ENST00000641339 PELP1Q8IZL8 1130 aaKnown RBP21.68■■□□□ 1.06
RGPD1-205ENST00000641339 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
RGPD1-205ENST00000641339 GOLGB1Q14789 3259 aaKnown RBP21.67■■□□□ 1.06
RGPD1-205ENST00000641339 KDM3BQ7LBC6 1761 aa21.67■■□□□ 1.06
RGPD1-205ENST00000641339 NBPF26B4DH59 902 aa21.67■■□□□ 1.06
RGPD1-205ENST00000641339 CHL1O00533 1208 aa21.67■■□□□ 1.06
RGPD1-205ENST00000641339 PIP4K2AP48426 406 aaPredicted RBP21.67■■□□□ 1.06
RGPD1-205ENST00000641339 GPR162Q16538 588 aa21.67■■□□□ 1.06
RGPD1-205ENST00000641339 NBPF10Q6P3W6 841 aaKnown RBP21.67■■□□□ 1.06
RGPD1-205ENST00000641339 NBPF15Q8N660 670 aa21.67■■□□□ 1.06
RGPD1-205ENST00000641339 A0A087WZG4 1122 aa21.65■■□□□ 1.06
RGPD1-205ENST00000641339 DDR1Q08345 913 aa21.65■■□□□ 1.06
RGPD1-205ENST00000641339 TBC1D2BQ9UPU7 963 aa21.65■■□□□ 1.06
RGPD1-205ENST00000641339 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
RGPD1-205ENST00000641339 POLRMTO00411 1230 aaKnown RBP21.63■■□□□ 1.05
RGPD1-205ENST00000641339 ZNF330Q9Y3S2 320 aaPredicted RBP21.63■■□□□ 1.05
RGPD1-205ENST00000641339 NFIXQ14938 502 aa21.62■■□□□ 1.05
RGPD1-205ENST00000641339 ZNF784Q8NCA9 323 aaPredicted RBP21.62■■□□□ 1.05
RGPD1-205ENST00000641339 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
RGPD1-205ENST00000641339 ZNF853P0CG23 659 aa21.61■■□□□ 1.05
RGPD1-205ENST00000641339 DZIP3Q86Y13 1208 aaKnown RBP21.6■■□□□ 1.05
RGPD1-205ENST00000641339 CFAP44Q96MT7 982 aa21.6■■□□□ 1.05
RGPD1-205ENST00000641339 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
RGPD1-205ENST00000641339 SENP3-EIF4A1A0A087X0R7 540 aa21.59■■□□□ 1.05
RGPD1-205ENST00000641339 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
RGPD1-205ENST00000641339 C10orf71Q711Q0 1435 aa21.58■■□□□ 1.05
RGPD1-205ENST00000641339 TBC1D9BQ66K14 1250 aa21.58■■□□□ 1.05
RGPD1-205ENST00000641339 YBX3P16989 372 aaKnown RBP eCLIP21.57■■□□□ 1.04
RGPD1-205ENST00000641339 TGFB2P61812 414 aa21.57■■□□□ 1.04
RGPD1-205ENST00000641339 MBIPQ9NS73 344 aa21.57■■□□□ 1.04
RGPD1-205ENST00000641339 PDIA6Q15084 440 aa21.56■■□□□ 1.04
RGPD1-205ENST00000641339 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
RGPD1-205ENST00000641339 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
RGPD1-205ENST00000641339 SERPINB2P05120 415 aa21.55■■□□□ 1.04
RGPD1-205ENST00000641339 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
RGPD1-205ENST00000641339 BICDL1Q6ZP65 573 aa21.55■■□□□ 1.04
RGPD1-205ENST00000641339 LRP10Q7Z4F1 713 aa21.55■■□□□ 1.04
RGPD1-205ENST00000641339 IFT57Q9NWB7 429 aa21.55■■□□□ 1.04
RGPD1-205ENST00000641339 LAMB4A4D0S4 1761 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 A0A0G2JLW4 131 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 EIF2S2P20042 333 aaKnown RBP21.54■■□□□ 1.04
RGPD1-205ENST00000641339 KCNA3P22001 575 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 CLEC4GQ6UXB4 293 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 WWC1Q8IX03 1113 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 FAM9BQ8IZU0 186 aa21.54■■□□□ 1.04
RGPD1-205ENST00000641339 KIF13BQ9NQT8 1826 aa21.53■■□□□ 1.04
RGPD1-205ENST00000641339 MYL6BP14649 208 aa21.53■■□□□ 1.04
RGPD1-205ENST00000641339 CALD1Q05682 793 aaKnown RBP21.53■■□□□ 1.04
RGPD1-205ENST00000641339 NGEFQ8N5V2 710 aa21.53■■□□□ 1.04
RGPD1-205ENST00000641339 ERBB4Q15303 1308 aa21.53■■□□□ 1.04
RGPD1-205ENST00000641339 RGL2O15211 777 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 DPEP1P16444 411 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 GNAI1P63096 354 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 HLFQ16534 295 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 WWC3Q9ULE0 1092 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 SCN7AQ01118 1682 aa21.52■■□□□ 1.04
RGPD1-205ENST00000641339 PROSER3Q2NL68 480 aa21.51■■□□□ 1.03
RGPD1-205ENST00000641339 KIAA1551Q9HCM1 1747 aa21.51■■□□□ 1.03
RGPD1-205ENST00000641339 NECTIN2Q92692 538 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms