RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
SPIN3-233ENST00000640039 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
SPIN3-233ENST00000640039 AMIGO3Q86WK7 504 aa20.75■□□□□ 0.91
SPIN3-233ENST00000640039 POLD1P28340 1107 aa20.74■□□□□ 0.91
SPIN3-233ENST00000640039 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
SPIN3-233ENST00000640039 TRIM35Q9UPQ4 493 aa20.74■□□□□ 0.91
SPIN3-233ENST00000640039 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
SPIN3-233ENST00000640039 SNRPA1P09661 255 aaKnown RBP20.73■□□□□ 0.91
SPIN3-233ENST00000640039 RFC4P35249 363 aa20.72■□□□□ 0.91
SPIN3-233ENST00000640039 MSL1Q68DK7 614 aa20.72■□□□□ 0.91
SPIN3-233ENST00000640039 INTS5Q6P9B9 1019 aaKnown RBP20.72■□□□□ 0.91
SPIN3-233ENST00000640039 FAM9BQ8IZU0 186 aa20.72■□□□□ 0.91
SPIN3-233ENST00000640039 BABAM1Q9NWV8 329 aa20.72■□□□□ 0.91
SPIN3-233ENST00000640039 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
SPIN3-233ENST00000640039 ZBTB1Q9Y2K1 713 aa20.71■□□□□ 0.91
SPIN3-233ENST00000640039 UTRNP46939 3433 aa20.7■□□□□ 0.9
SPIN3-233ENST00000640039 CALD1Q05682 793 aaKnown RBP20.7■□□□□ 0.9
SPIN3-233ENST00000640039 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
SPIN3-233ENST00000640039 LAS1LQ9Y4W2 734 aaKnown RBP20.7■□□□□ 0.9
SPIN3-233ENST00000640039 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
SPIN3-233ENST00000640039 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
SPIN3-233ENST00000640039 SOS1Q07889 1333 aaPredicted RBP20.69■□□□□ 0.9
SPIN3-233ENST00000640039 C4AP0C0L4 1744 aa20.68■□□□□ 0.9
SPIN3-233ENST00000640039 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
SPIN3-233ENST00000640039 USP16Q9Y5T5 823 aa20.67■□□□□ 0.9
SPIN3-233ENST00000640039 COL15A1P39059 1388 aa20.67■□□□□ 0.9
SPIN3-233ENST00000640039 PRAMEF22A3QJZ6 481 aa20.66■□□□□ 0.9
SPIN3-233ENST00000640039 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
SPIN3-233ENST00000640039 ZNF330Q9Y3S2 320 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-233ENST00000640039 LAMB4A4D0S4 1761 aa20.66■□□□□ 0.9
SPIN3-233ENST00000640039 CHD4Q14839 1912 aa20.66■□□□□ 0.9
SPIN3-233ENST00000640039 ZPR1O75312 459 aa20.65■□□□□ 0.9
SPIN3-233ENST00000640039 GIGYF1O75420 1035 aaPredicted RBP20.65■□□□□ 0.9
SPIN3-233ENST00000640039 A1BGP04217 495 aa20.65■□□□□ 0.9
SPIN3-233ENST00000640039 ZNF784Q8NCA9 323 aaPredicted RBP20.65■□□□□ 0.9
SPIN3-233ENST00000640039 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.89
SPIN3-233ENST00000640039 A0A087WZG4 1122 aa20.64■□□□□ 0.89
SPIN3-233ENST00000640039 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
SPIN3-233ENST00000640039 CHL1O00533 1208 aa20.64■□□□□ 0.89
SPIN3-233ENST00000640039 IL6STP40189 918 aaPredicted RBP20.64■□□□□ 0.89
SPIN3-233ENST00000640039 NLGN1Q8N2Q7 840 aa20.64■□□□□ 0.89
SPIN3-233ENST00000640039 CFAP44Q96MT7 982 aa20.64■□□□□ 0.89
SPIN3-233ENST00000640039 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
SPIN3-233ENST00000640039 KLHL34Q8N239 644 aa20.63■□□□□ 0.89
SPIN3-233ENST00000640039 SRP68Q9UHB9 627 aaKnown RBP20.63■□□□□ 0.89
SPIN3-233ENST00000640039 GYS1P13807 737 aa20.62■□□□□ 0.89
SPIN3-233ENST00000640039 EIF5P55010 431 aaKnown RBP20.62■□□□□ 0.89
SPIN3-233ENST00000640039 GNAI1P63096 354 aa20.62■□□□□ 0.89
SPIN3-233ENST00000640039 NCBP3Q53F19 620 aaKnown RBP20.62■□□□□ 0.89
SPIN3-233ENST00000640039 IFT57Q9NWB7 429 aa20.62■□□□□ 0.89
SPIN3-233ENST00000640039 NLGN2Q8NFZ4 835 aa20.61■□□□□ 0.89
SPIN3-233ENST00000640039 NARFQ9UHQ1 456 aa20.61■□□□□ 0.89
SPIN3-233ENST00000640039 MMP10P09238 476 aa20.6■□□□□ 0.89
SPIN3-233ENST00000640039 PIP4K2AP48426 406 aaPredicted RBP20.6■□□□□ 0.89
SPIN3-233ENST00000640039 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
SPIN3-233ENST00000640039 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
SPIN3-233ENST00000640039 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
SPIN3-233ENST00000640039 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
SPIN3-233ENST00000640039 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
SPIN3-233ENST00000640039 ZNF853P0CG23 659 aa20.58■□□□□ 0.89
SPIN3-233ENST00000640039 GPR162Q16538 588 aa20.58■□□□□ 0.89
SPIN3-233ENST00000640039 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
SPIN3-233ENST00000640039 FKBP8Q14318 412 aa20.57■□□□□ 0.88
SPIN3-233ENST00000640039 TBC1D2BQ9UPU7 963 aa20.57■□□□□ 0.88
SPIN3-233ENST00000640039 PARP3Q9Y6F1 533 aa20.57■□□□□ 0.88
SPIN3-233ENST00000640039 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
SPIN3-233ENST00000640039 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
SPIN3-233ENST00000640039 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
SPIN3-233ENST00000640039 DZIP3Q86Y13 1208 aaKnown RBP20.56■□□□□ 0.88
SPIN3-233ENST00000640039 MIER1Q8N108 512 aa20.56■□□□□ 0.88
SPIN3-233ENST00000640039 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
SPIN3-233ENST00000640039 KRT24Q2M2I5 525 aa20.55■□□□□ 0.88
SPIN3-233ENST00000640039 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
SPIN3-233ENST00000640039 IL16Q14005 1332 aa20.54■□□□□ 0.88
SPIN3-233ENST00000640039 HOXB7P09629 217 aa20.54■□□□□ 0.88
SPIN3-233ENST00000640039 MYL6BP14649 208 aa20.54■□□□□ 0.88
SPIN3-233ENST00000640039 DUSP27Q5VZP5 1158 aa20.53■□□□□ 0.88
SPIN3-233ENST00000640039 WDR63Q8IWG1 891 aa20.53■□□□□ 0.88
SPIN3-233ENST00000640039 CAMTA2O94983 1202 aa20.52■□□□□ 0.88
SPIN3-233ENST00000640039 YBX3P16989 372 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPIN3-233ENST00000640039 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.88
SPIN3-233ENST00000640039 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
SPIN3-233ENST00000640039 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
SPIN3-233ENST00000640039 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
SPIN3-233ENST00000640039 BCORQ6W2J9 1755 aa20.51■□□□□ 0.87
SPIN3-233ENST00000640039 KIF6Q6ZMV9 814 aa20.51■□□□□ 0.87
SPIN3-233ENST00000640039 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
SPIN3-233ENST00000640039 GOLGB1Q14789 3259 aaKnown RBP20.51■□□□□ 0.87
SPIN3-233ENST00000640039 TM4SF1P30408 202 aa20.5■□□□□ 0.87
SPIN3-233ENST00000640039 NFIXQ14938 502 aa20.5■□□□□ 0.87
SPIN3-233ENST00000640039 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
SPIN3-233ENST00000640039 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
SPIN3-233ENST00000640039 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
SPIN3-233ENST00000640039 DDR1Q08345 913 aa20.49■□□□□ 0.87
SPIN3-233ENST00000640039 CHMP4AQ9BY43 222 aa20.49■□□□□ 0.87
SPIN3-233ENST00000640039 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
SPIN3-233ENST00000640039 ELL2O00472 640 aaPredicted RBP20.48■□□□□ 0.87
SPIN3-233ENST00000640039 TBC1D9BQ66K14 1250 aa20.48■□□□□ 0.87
SPIN3-233ENST00000640039 CLEC4GQ6UXB4 293 aa20.48■□□□□ 0.87
SPIN3-233ENST00000640039 RGL2O15211 777 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms