RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 ZBBXA8MT70 800 aa17.14■□□□□ 0.33
CACNA1A-244ENST00000637625 F12P00748 615 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-244ENST00000637625 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
CACNA1A-244ENST00000637625 MAP10Q9P2G4 905 aa17.13■□□□□ 0.33
CACNA1A-244ENST00000637625 SLC4A3P48751 1232 aa17.12■□□□□ 0.33
CACNA1A-244ENST00000637625 FKBPLQ9UIM3 349 aa17.12■□□□□ 0.33
CACNA1A-244ENST00000637625 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
CACNA1A-244ENST00000637625 CRTC2Q53ET0 693 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-244ENST00000637625 NOVA2Q9UNW9 492 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-244ENST00000637625 YTHDC2Q9H6S0 1430 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 BHMG1C9JSJ3 638 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 E9PSI1 815 aa17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
CACNA1A-244ENST00000637625 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
CACNA1A-244ENST00000637625 ACTN4O43707 911 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-244ENST00000637625 VARS2Q5ST30 1063 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-244ENST00000637625 TULP4Q9NRJ4 1543 aa17.1■□□□□ 0.33
CACNA1A-244ENST00000637625 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-244ENST00000637625 MAMSTRQ6ZN01 415 aa17.1■□□□□ 0.33
CACNA1A-244ENST00000637625 SNPHO15079 494 aa17.09■□□□□ 0.33
CACNA1A-244ENST00000637625 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
CACNA1A-244ENST00000637625 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-244ENST00000637625 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
CACNA1A-244ENST00000637625 SKIP12755 728 aa17.08■□□□□ 0.33
CACNA1A-244ENST00000637625 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.33
CACNA1A-244ENST00000637625 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.33
CACNA1A-244ENST00000637625 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
CACNA1A-244ENST00000637625 LAPTM4BQ86VI4 370 aa17.07■□□□□ 0.32
CACNA1A-244ENST00000637625 OCSTAMPQ9BR26 566 aa17.07■□□□□ 0.32
CACNA1A-244ENST00000637625 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
CACNA1A-244ENST00000637625 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
CACNA1A-244ENST00000637625 Q3C1V9 767 aa17.06■□□□□ 0.32
CACNA1A-244ENST00000637625 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
CACNA1A-244ENST00000637625 USB1Q9BQ65 265 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-244ENST00000637625 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
CACNA1A-244ENST00000637625 PARD3Q8TEW0 1356 aa17.04■□□□□ 0.32
CACNA1A-244ENST00000637625 BRICD5Q6PL45 260 aa17.04■□□□□ 0.32
CACNA1A-244ENST00000637625 POGKQ9P215 609 aa17.04■□□□□ 0.32
CACNA1A-244ENST00000637625 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-244ENST00000637625 METP08581 1390 aa17.04■□□□□ 0.32
CACNA1A-244ENST00000637625 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L10C9JJH3 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L12C9JPN9 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L21D6R901 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 LTKP29376 864 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
CACNA1A-244ENST00000637625 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-244ENST00000637625 FAM196BA6NMK8 535 aa17.02■□□□□ 0.32
CACNA1A-244ENST00000637625 SSFA2P28290 1259 aa17.02■□□□□ 0.32
CACNA1A-244ENST00000637625 RALBP1Q15311 655 aa17.02■□□□□ 0.32
CACNA1A-244ENST00000637625 EVC2Q86UK5 1308 aa17.02■□□□□ 0.32
CACNA1A-244ENST00000637625 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.31
CACNA1A-244ENST00000637625 PTK7Q13308 1070 aa17.01■□□□□ 0.31
CACNA1A-244ENST00000637625 THAP11Q96EK4 314 aa17.01■□□□□ 0.31
CACNA1A-244ENST00000637625 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-244ENST00000637625 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-244ENST00000637625 NCOA4Q13772 614 aa17.01■□□□□ 0.31
CACNA1A-244ENST00000637625 SCNN1AP37088 669 aa17■□□□□ 0.31
CACNA1A-244ENST00000637625 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
CACNA1A-244ENST00000637625 WAPLQ7Z5K2 1190 aa17■□□□□ 0.31
CACNA1A-244ENST00000637625 SLIT1O75093 1534 aa17■□□□□ 0.31
CACNA1A-244ENST00000637625 DLC1Q96QB1 1528 aa17■□□□□ 0.31
CACNA1A-244ENST00000637625 KNDC1Q76NI1 1749 aa17■□□□□ 0.31
CACNA1A-244ENST00000637625 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
CACNA1A-244ENST00000637625 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
CACNA1A-244ENST00000637625 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
CACNA1A-244ENST00000637625 ERBB3P21860 1342 aa16.99■□□□□ 0.31
CACNA1A-244ENST00000637625 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
CACNA1A-244ENST00000637625 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
CACNA1A-244ENST00000637625 PHTF2Q8N3S3 785 aa16.98■□□□□ 0.31
CACNA1A-244ENST00000637625 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
CACNA1A-244ENST00000637625 CEP126Q9P2H0 1117 aa16.98■□□□□ 0.31
CACNA1A-244ENST00000637625 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 EID1Q9Y6B2 187 aa16.97■□□□□ 0.31
CACNA1A-244ENST00000637625 DNAJC14Q6Y2X3 702 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-244ENST00000637625 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-244ENST00000637625 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-244ENST00000637625 CPS1P31327 1500 aa16.95■□□□□ 0.3
CACNA1A-244ENST00000637625 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
CACNA1A-244ENST00000637625 PTPRNQ16849 979 aa16.95■□□□□ 0.3
CACNA1A-244ENST00000637625 ABCC11Q96J66 1382 aa16.95■□□□□ 0.3
CACNA1A-244ENST00000637625 APLP1P51693 650 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms