RNA–Protein interactions for RNA: ENST00000636988.1

CNTNAP2-216, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-216ENST00000636988 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
CNTNAP2-216ENST00000636988 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
CNTNAP2-216ENST00000636988 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP2-216ENST00000636988 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
CNTNAP2-216ENST00000636988 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP2-216ENST00000636988 HOXB7P09629 217 aa13.12□□□□□ -0.31
CNTNAP2-216ENST00000636988 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
CNTNAP2-216ENST00000636988 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
CNTNAP2-216ENST00000636988 ITPK1Q13572 414 aa13.12□□□□□ -0.31
CNTNAP2-216ENST00000636988 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
CNTNAP2-216ENST00000636988 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
CNTNAP2-216ENST00000636988 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
CNTNAP2-216ENST00000636988 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
CNTNAP2-216ENST00000636988 KCNQ3O43525 872 aa13.1□□□□□ -0.31
CNTNAP2-216ENST00000636988 PTCD1O75127 700 aaKnown RBP13.1□□□□□ -0.31
CNTNAP2-216ENST00000636988 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
CNTNAP2-216ENST00000636988 SLC15A2Q16348 729 aa13.1□□□□□ -0.31
CNTNAP2-216ENST00000636988 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
CNTNAP2-216ENST00000636988 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
CNTNAP2-216ENST00000636988 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
CNTNAP2-216ENST00000636988 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
CNTNAP2-216ENST00000636988 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
CNTNAP2-216ENST00000636988 STARD3NLO95772 234 aa13.08□□□□□ -0.32
CNTNAP2-216ENST00000636988 SSFA2P28290 1259 aa13.08□□□□□ -0.32
CNTNAP2-216ENST00000636988 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
CNTNAP2-216ENST00000636988 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
CNTNAP2-216ENST00000636988 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
CNTNAP2-216ENST00000636988 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
CNTNAP2-216ENST00000636988 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
CNTNAP2-216ENST00000636988 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
CNTNAP2-216ENST00000636988 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
CNTNAP2-216ENST00000636988 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
CNTNAP2-216ENST00000636988 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
CNTNAP2-216ENST00000636988 E9PSI1 815 aa13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 RGL2O15211 777 aa13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
CNTNAP2-216ENST00000636988 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 KCNQ4P56696 695 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 FANCIQ9NVI1 1328 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
CNTNAP2-216ENST00000636988 EIF5P55010 431 aaKnown RBP13.04□□□□□ -0.32
CNTNAP2-216ENST00000636988 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
CNTNAP2-216ENST00000636988 AK7Q96M32 723 aa13.04□□□□□ -0.32
CNTNAP2-216ENST00000636988 LRP5O75197 1615 aa13.03□□□□□ -0.32
CNTNAP2-216ENST00000636988 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
CNTNAP2-216ENST00000636988 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
CNTNAP2-216ENST00000636988 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
CNTNAP2-216ENST00000636988 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
CNTNAP2-216ENST00000636988 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
CNTNAP2-216ENST00000636988 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
CNTNAP2-216ENST00000636988 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
CNTNAP2-216ENST00000636988 GNPATO15228 680 aa13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 COL15A1P39059 1388 aa13.01□□□□□ -0.33
CNTNAP2-216ENST00000636988 NUP98P52948 1817 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 A0A087WZG4 1122 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
CNTNAP2-216ENST00000636988 NBPF26B4DH59 902 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 A1BGP04217 495 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 PDIA6Q15084 440 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
CNTNAP2-216ENST00000636988 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
CNTNAP2-216ENST00000636988 NBPF15Q8N660 670 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 C8orf58Q8NAV2 365 aa13□□□□□ -0.33
CNTNAP2-216ENST00000636988 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
CNTNAP2-216ENST00000636988 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
CNTNAP2-216ENST00000636988 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
CNTNAP2-216ENST00000636988 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
CNTNAP2-216ENST00000636988 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
CNTNAP2-216ENST00000636988 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 VAMP4O75379 141 aa12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 TWISTNBQ3B726 338 aaPredicted RBP12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 HDGFL1Q5TGJ6 251 aa12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 DBF4Q9UBU7 674 aaPredicted RBP12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
CNTNAP2-216ENST00000636988 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
CNTNAP2-216ENST00000636988 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
CNTNAP2-216ENST00000636988 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
CNTNAP2-216ENST00000636988 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
CNTNAP2-216ENST00000636988 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
CNTNAP2-216ENST00000636988 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
CNTNAP2-216ENST00000636988 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms