RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
CLN6-211ENST00000635754 CFAP44Q96MT7 982 aa20.2■□□□□ 0.82
CLN6-211ENST00000635754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
CLN6-211ENST00000635754 CHL1O00533 1208 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
CLN6-211ENST00000635754 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 LRP5O75197 1615 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 RPS6KA4O75676 772 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
CLN6-211ENST00000635754 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
CLN6-211ENST00000635754 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
CLN6-211ENST00000635754 C4AP0C0L4 1744 aa20.18■□□□□ 0.82
CLN6-211ENST00000635754 ZBTB7AO95365 584 aa20.18■□□□□ 0.82
CLN6-211ENST00000635754 GNAI1P63096 354 aa20.18■□□□□ 0.82
CLN6-211ENST00000635754 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
CLN6-211ENST00000635754 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
CLN6-211ENST00000635754 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
CLN6-211ENST00000635754 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
CLN6-211ENST00000635754 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
CLN6-211ENST00000635754 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
CLN6-211ENST00000635754 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
CLN6-211ENST00000635754 ZBTB1Q9Y2K1 713 aa20.16■□□□□ 0.82
CLN6-211ENST00000635754 MBIPQ9NS73 344 aa20.15■□□□□ 0.82
CLN6-211ENST00000635754 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
CLN6-211ENST00000635754 SOS1Q07889 1333 aaPredicted RBP20.15■□□□□ 0.82
CLN6-211ENST00000635754 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
CLN6-211ENST00000635754 IL16Q14005 1332 aa20.14■□□□□ 0.81
CLN6-211ENST00000635754 COL15A1P39059 1388 aa20.14■□□□□ 0.81
CLN6-211ENST00000635754 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
CLN6-211ENST00000635754 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
CLN6-211ENST00000635754 A1BGP04217 495 aa20.12■□□□□ 0.81
CLN6-211ENST00000635754 RFC4P35249 363 aa20.12■□□□□ 0.81
CLN6-211ENST00000635754 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
CLN6-211ENST00000635754 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
CLN6-211ENST00000635754 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
CLN6-211ENST00000635754 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
CLN6-211ENST00000635754 EIF5P55010 431 aaKnown RBP20.1■□□□□ 0.81
CLN6-211ENST00000635754 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
CLN6-211ENST00000635754 KRT24Q2M2I5 525 aa20.09■□□□□ 0.81
CLN6-211ENST00000635754 MSL1Q68DK7 614 aa20.09■□□□□ 0.81
CLN6-211ENST00000635754 A0A087WZG4 1122 aa20.08■□□□□ 0.8
CLN6-211ENST00000635754 HOXB7P09629 217 aa20.08■□□□□ 0.8
CLN6-211ENST00000635754 POLD1P28340 1107 aa20.08■□□□□ 0.8
CLN6-211ENST00000635754 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.8
CLN6-211ENST00000635754 TSR2Q969E8 191 aaKnown RBP20.08■□□□□ 0.8
CLN6-211ENST00000635754 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.8
CLN6-211ENST00000635754 SCN7AQ01118 1682 aa20.07■□□□□ 0.8
CLN6-211ENST00000635754 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
CLN6-211ENST00000635754 ZNF521Q96K83 1311 aa20.07■□□□□ 0.8
CLN6-211ENST00000635754 ZPR1O75312 459 aa20.07■□□□□ 0.8
CLN6-211ENST00000635754 EIF2S2P20042 333 aaKnown RBP20.07■□□□□ 0.8
CLN6-211ENST00000635754 PTGER2P43116 358 aa20.07■□□□□ 0.8
CLN6-211ENST00000635754 SRCAPQ6ZRS2 3230 aa20.06■□□□□ 0.8
CLN6-211ENST00000635754 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
CLN6-211ENST00000635754 DUSP27Q5VZP5 1158 aa20.06■□□□□ 0.8
CLN6-211ENST00000635754 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
CLN6-211ENST00000635754 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
CLN6-211ENST00000635754 CNKSR2Q8WXI2 1034 aa20.06■□□□□ 0.8
CLN6-211ENST00000635754 SGIP1Q9BQI5 828 aa20.06■□□□□ 0.8
CLN6-211ENST00000635754 PPP1R1BQ9UD71 204 aaPredicted RBP20.06■□□□□ 0.8
CLN6-211ENST00000635754 GYS1P13807 737 aa20.05■□□□□ 0.8
CLN6-211ENST00000635754 SRP68Q9UHB9 627 aaKnown RBP20.05■□□□□ 0.8
CLN6-211ENST00000635754 NARFQ9UHQ1 456 aa20.05■□□□□ 0.8
CLN6-211ENST00000635754 BCORQ6W2J9 1755 aa20.05■□□□□ 0.8
CLN6-211ENST00000635754 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
CLN6-211ENST00000635754 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
CLN6-211ENST00000635754 ARXQ96QS3 562 aa20.04■□□□□ 0.8
CLN6-211ENST00000635754 MYH16Q9H6N6 1097 aa20.04■□□□□ 0.8
CLN6-211ENST00000635754 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
CLN6-211ENST00000635754 USPL1Q5W0Q7 1092 aa20.03■□□□□ 0.8
CLN6-211ENST00000635754 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
CLN6-211ENST00000635754 MYL6BP14649 208 aa20.02■□□□□ 0.8
CLN6-211ENST00000635754 GOLGA2Q08379 1002 aa20.02■□□□□ 0.8
CLN6-211ENST00000635754 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
CLN6-211ENST00000635754 C8orf58Q8NAV2 365 aa20.02■□□□□ 0.8
CLN6-211ENST00000635754 TBC1D2BQ9UPU7 963 aa20.02■□□□□ 0.8
CLN6-211ENST00000635754 ELL2O00472 640 aaPredicted RBP20.02■□□□□ 0.79
CLN6-211ENST00000635754 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.79
CLN6-211ENST00000635754 SPINK5Q9NQ38 1064 aaPredicted RBP20.02■□□□□ 0.79
CLN6-211ENST00000635754 MMP10P09238 476 aa20■□□□□ 0.79
CLN6-211ENST00000635754 FKBP8Q14318 412 aa20■□□□□ 0.79
CLN6-211ENST00000635754 HNRNPUQ00839 825 aaKnown RBP eCLIP19.99■□□□□ 0.79
CLN6-211ENST00000635754 PDIA6Q15084 440 aa19.99■□□□□ 0.79
CLN6-211ENST00000635754 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
CLN6-211ENST00000635754 TSPYL6Q8N831 410 aa19.99■□□□□ 0.79
CLN6-211ENST00000635754 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
CLN6-211ENST00000635754 CHPF2Q9P2E5 772 aa19.99■□□□□ 0.79
CLN6-211ENST00000635754 DBF4Q9UBU7 674 aaPredicted RBP19.99■□□□□ 0.79
CLN6-211ENST00000635754 E9PSI1 815 aa19.98■□□□□ 0.79
CLN6-211ENST00000635754 CAMTA2O94983 1202 aa19.98■□□□□ 0.79
CLN6-211ENST00000635754 ANXA1P04083 346 aa19.97■□□□□ 0.79
CLN6-211ENST00000635754 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
CLN6-211ENST00000635754 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
CLN6-211ENST00000635754 KIF6Q6ZMV9 814 aa19.97■□□□□ 0.79
CLN6-211ENST00000635754 BCL2L12Q9HB09 334 aa19.97■□□□□ 0.79
CLN6-211ENST00000635754 ZNF652Q9Y2D9 606 aa19.97■□□□□ 0.79
CLN6-211ENST00000635754 PARP3Q9Y6F1 533 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms