RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 ESPNB1AK53 854 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 USP4Q13107 963 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 NIF3L1Q9GZT8 377 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 ZSWIM6Q9HCJ5 1215 aa10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 RSF1Q96T23 1441 aaPredicted RBP10.23□□□□□ -0.77
SMARCA2-243ENST00000635590 WIZO95785 1651 aa10.22□□□□□ -0.77
SMARCA2-243ENST00000635590 EVA1BQ9NVM1 165 aa10.22□□□□□ -0.77
SMARCA2-243ENST00000635590 FAN1Q9Y2M0 1017 aa10.22□□□□□ -0.77
SMARCA2-243ENST00000635590 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
SMARCA2-243ENST00000635590 K7ELQ4 463 aaPredicted RBP10.21□□□□□ -0.77
SMARCA2-243ENST00000635590 ACTN4O43707 911 aaKnown RBP10.21□□□□□ -0.77
SMARCA2-243ENST00000635590 ALKBH2Q6NS38 261 aa10.21□□□□□ -0.77
SMARCA2-243ENST00000635590 C16orf46Q6P387 395 aa10.21□□□□□ -0.77
SMARCA2-243ENST00000635590 ENPP3O14638 875 aa10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 PEX14O75381 377 aa10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 CCNYL3P0C7X3 344 aa10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 ATF4P18848 351 aaPredicted RBP10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 PLEKHG6Q3KR16 790 aa10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 RPUSD2Q8IZ73 545 aaKnown RBP10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 SALL2Q9Y467 1007 aaPredicted RBP10.21□□□□□ -0.78
SMARCA2-243ENST00000635590 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
SMARCA2-243ENST00000635590 HSP90AB2PQ58FF8 381 aa10.2□□□□□ -0.78
SMARCA2-243ENST00000635590 SCG3Q8WXD2 468 aaKnown RBP10.2□□□□□ -0.78
SMARCA2-243ENST00000635590 CFHR5Q9BXR6 569 aa10.2□□□□□ -0.78
SMARCA2-243ENST00000635590 RABGEF1Q9UJ41 708 aa10.2□□□□□ -0.78
SMARCA2-243ENST00000635590 AK5Q9Y6K8 562 aa10.2□□□□□ -0.78
SMARCA2-243ENST00000635590 CCDC194A0A1B0GVG4 234 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 ZBTB24O43167 697 aaPredicted RBP10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 GJA8P48165 433 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 PTPN12Q05209 780 aaKnown RBP10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 SH3BP5LQ7L8J4 393 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 ZNF358Q9NW07 568 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 ARHGEF11O15085 1522 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 SERINC3Q13530 473 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 IRF2BPLQ9H1B7 796 aa10.19□□□□□ -0.78
SMARCA2-243ENST00000635590 CYB5RLQ6IPT4 315 aa10.18□□□□□ -0.78
SMARCA2-243ENST00000635590 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
SMARCA2-243ENST00000635590 PCDHB11Q9Y5F2 797 aa10.18□□□□□ -0.78
SMARCA2-243ENST00000635590 HS2ST1Q7LGA3 356 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 CKAP2LQ8IYA6 745 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 CARD14Q9BXL6 1004 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 STIM2Q9P246 746 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 TNFRSF10BO14763 440 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 DNAJC6O75061 913 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 EVX2Q03828 476 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 SPC25Q9HBM1 224 aa10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 MAGEC2Q9UBF1 373 aaPredicted RBP10.17□□□□□ -0.78
SMARCA2-243ENST00000635590 MZF1P28698 734 aaPredicted RBP10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 MORC4Q8TE76 937 aa10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 GGT7Q9UJ14 662 aa10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 METRNQ9UJH8 293 aa10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 IFT140Q96RY7 1462 aa10.16□□□□□ -0.78
SMARCA2-243ENST00000635590 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
SMARCA2-243ENST00000635590 STAG1Q8WVM7 1258 aa10.15□□□□□ -0.78
SMARCA2-243ENST00000635590 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.78
SMARCA2-243ENST00000635590 PAK2Q13177 524 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 NBPF6Q5VWK0 638 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 FBF1Q8TES7 1133 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 NBPF4Q96M43 638 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 DDX56Q9NY93 547 aaKnown RBP10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 G3BP2Q9UN86 482 aaKnown RBP10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 MAGEB6P1A0A0J9YX57 407 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 COX20Q5RI15 118 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 MKL1Q969V6 931 aa10.14□□□□□ -0.79
SMARCA2-243ENST00000635590 ZNF608Q9ULD9 1512 aaPredicted RBP10.13□□□□□ -0.79
SMARCA2-243ENST00000635590 TMEM229AB2RXF0 380 aa10.13□□□□□ -0.79
SMARCA2-243ENST00000635590 ATCAYQ86WG3 371 aa10.13□□□□□ -0.79
SMARCA2-243ENST00000635590 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
SMARCA2-243ENST00000635590 GJD3Q8N144 294 aa10.13□□□□□ -0.79
SMARCA2-243ENST00000635590 GABBR1Q9UBS5 961 aa10.13□□□□□ -0.79
SMARCA2-243ENST00000635590 ZBTB39O15060 712 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 PLEKHG4Q58EX7 1191 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 SH3RF1Q7Z6J0 888 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 GPRASP2Q96D09 838 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 FRMD6Q96NE9 622 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 NEUROD4Q9HD90 331 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 SCUBE3Q8IX30 993 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 TSPAN10Q9H1Z9 355 aaPredicted RBP10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 POLIQ9UNA4 740 aa10.12□□□□□ -0.79
SMARCA2-243ENST00000635590 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
SMARCA2-243ENST00000635590 S100BP04271 92 aaPredicted RBP10.11□□□□□ -0.79
SMARCA2-243ENST00000635590 CSRNP1Q96S65 589 aa10.11□□□□□ -0.79
SMARCA2-243ENST00000635590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCA2-243ENST00000635590 BCCIPQ9P287 314 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCA2-243ENST00000635590 A0A1W2PRU2 124 aa10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 DXOO77932 396 aaKnown RBP10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 EIF4BP23588 611 aaKnown RBP10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 ERFEQ4G0M1 354 aa10.1□□□□□ -0.79
SMARCA2-243ENST00000635590 FAM26DQ5JW98 314 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms