RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
SMARCA2-239ENST00000635388 CAPN5O15484 640 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-239ENST00000635388 TLR1Q15399 786 aa11.75□□□□□ -0.53
SMARCA2-239ENST00000635388 SLC9A9Q8IVB4 645 aa11.75□□□□□ -0.53
SMARCA2-239ENST00000635388 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-239ENST00000635388 GZF1Q9H116 711 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-239ENST00000635388 ZNF395Q9H8N7 513 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-239ENST00000635388 FOXO3O43524 673 aa11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 ARID4AP29374 1257 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 CENPCQ03188 943 aa11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 ABCA5Q8WWZ7 1642 aa11.74□□□□□ -0.53
SMARCA2-239ENST00000635388 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
SMARCA2-239ENST00000635388 TBCELQ5QJ74 424 aa11.73□□□□□ -0.53
SMARCA2-239ENST00000635388 SNAPC4Q5SXM2 1469 aa11.73□□□□□ -0.53
SMARCA2-239ENST00000635388 CAPN12Q6ZSI9 719 aa11.73□□□□□ -0.53
SMARCA2-239ENST00000635388 LINC00528Q8N1L1 170 aa11.73□□□□□ -0.53
SMARCA2-239ENST00000635388 ABCA10Q8WWZ4 1543 aa11.73□□□□□ -0.53
SMARCA2-239ENST00000635388 MEN1O00255 615 aa11.72□□□□□ -0.53
SMARCA2-239ENST00000635388 CDK2AP1O14519 115 aa11.72□□□□□ -0.53
SMARCA2-239ENST00000635388 SPINT1O43278 529 aa11.72□□□□□ -0.53
SMARCA2-239ENST00000635388 SERPINB4P48594 390 aa11.72□□□□□ -0.53
SMARCA2-239ENST00000635388 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-239ENST00000635388 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-239ENST00000635388 GRIN2BQ13224 1484 aa11.71□□□□□ -0.53
SMARCA2-239ENST00000635388 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-239ENST00000635388 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-239ENST00000635388 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.53
SMARCA2-239ENST00000635388 COL26A1Q96A83 441 aa11.71□□□□□ -0.53
SMARCA2-239ENST00000635388 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
SMARCA2-239ENST00000635388 INSM2Q96T92 566 aaPredicted RBP11.7□□□□□ -0.54
SMARCA2-239ENST00000635388 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
SMARCA2-239ENST00000635388 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
SMARCA2-239ENST00000635388 RIMBP3CA6NJZ7 1639 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 RIMBP3BA6NNM3 1639 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 RIMBP3Q9UFD9 1639 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 GPC1P35052 558 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 SMCPP49901 116 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 NLRP3Q96P20 1036 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 C2orf49Q9BVC5 232 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 GRIP2Q9C0E4 1043 aa11.69□□□□□ -0.54
SMARCA2-239ENST00000635388 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-239ENST00000635388 PPP1R12BO60237 982 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-239ENST00000635388 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-239ENST00000635388 CTSOP43234 321 aaPredicted RBP11.67□□□□□ -0.54
SMARCA2-239ENST00000635388 MRPL14Q6P1L8 145 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-239ENST00000635388 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCA2-239ENST00000635388 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
SMARCA2-239ENST00000635388 EML1O00423 815 aa11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 DGAT1O75907 488 aa11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 TEAD4Q15561 434 aa11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 SH3PXD2AQ5TCZ1 1133 aa11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 TRIM46Q7Z4K8 759 aa11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 CRIPAKQ8N1N5 446 aa11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 ZSCAN10Q96SZ4 725 aaPredicted RBP11.66□□□□□ -0.54
SMARCA2-239ENST00000635388 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 SYNJ2O15056 1496 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 SOWAHDA6NJG2 315 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 GFRA3O60609 400 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 BMP1P13497 986 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 EGFL7Q9UHF1 273 aa11.65□□□□□ -0.54
SMARCA2-239ENST00000635388 ADAMTS12P58397 1594 aa11.64□□□□□ -0.55
SMARCA2-239ENST00000635388 TMCO4Q5TGY1 634 aa11.64□□□□□ -0.55
SMARCA2-239ENST00000635388 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
SMARCA2-239ENST00000635388 MTMR7Q9Y216 660 aa11.64□□□□□ -0.55
SMARCA2-239ENST00000635388 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
SMARCA2-239ENST00000635388 ZNF211Q13398 564 aaPredicted RBP11.63□□□□□ -0.55
SMARCA2-239ENST00000635388 C6orf118Q5T5N4 469 aa11.63□□□□□ -0.55
SMARCA2-239ENST00000635388 RNF217Q8TC41 542 aa11.63□□□□□ -0.55
SMARCA2-239ENST00000635388 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
SMARCA2-239ENST00000635388 POLMQ9NP87 494 aaPredicted RBP11.63□□□□□ -0.55
SMARCA2-239ENST00000635388 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
SMARCA2-239ENST00000635388 UPP2O95045 317 aa11.62□□□□□ -0.55
SMARCA2-239ENST00000635388 BMP2P12643 396 aa11.62□□□□□ -0.55
SMARCA2-239ENST00000635388 NOS2P35228 1153 aa11.62□□□□□ -0.55
SMARCA2-239ENST00000635388 PKDCCQ504Y2 493 aa11.62□□□□□ -0.55
SMARCA2-239ENST00000635388 QTRT2Q9H974 415 aaKnown RBP11.62□□□□□ -0.55
SMARCA2-239ENST00000635388 SERTM1A2A2V5 107 aa11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 SPATA31C2B4DYI2 1134 aa11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 NAA30Q147X3 362 aaPredicted RBP11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 ECM1Q16610 540 aa11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 SAP130Q9H0E3 1048 aa11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
SMARCA2-239ENST00000635388 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 ICMTO60725 284 aa11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 SLC27A3Q5K4L6 730 aa11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 TMEM214Q6NUQ4 689 aaKnown RBP11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 HELQQ8TDG4 1101 aa11.6□□□□□ -0.55
SMARCA2-239ENST00000635388 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms