RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
CROCCP4-202ENST00000633627 USP16Q9Y5T5 823 aa25.3■■□□□ 1.64
CROCCP4-202ENST00000633627 ZNF521Q96K83 1311 aa25.3■■□□□ 1.64
CROCCP4-202ENST00000633627 CASZ1Q86V15 1759 aa25.29■■□□□ 1.64
CROCCP4-202ENST00000633627 GNPATO15228 680 aa25.29■■□□□ 1.64
CROCCP4-202ENST00000633627 STARD3NLO95772 234 aa25.29■■□□□ 1.64
CROCCP4-202ENST00000633627 CCDC87Q9NVE4 849 aa25.29■■□□□ 1.64
CROCCP4-202ENST00000633627 RPS6KA4O75676 772 aa25.28■■□□□ 1.64
CROCCP4-202ENST00000633627 SSFA2P28290 1259 aa25.27■■□□□ 1.64
CROCCP4-202ENST00000633627 SMIM5Q71RC9 77 aa25.27■■□□□ 1.64
CROCCP4-202ENST00000633627 COL23A1Q86Y22 540 aaPredicted RBP25.27■■□□□ 1.64
CROCCP4-202ENST00000633627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.26■■□□□ 1.63
CROCCP4-202ENST00000633627 FLAD1Q8NFF5 587 aa25.26■■□□□ 1.63
CROCCP4-202ENST00000633627 ZBTB1Q9Y2K1 713 aa25.26■■□□□ 1.63
CROCCP4-202ENST00000633627 RTCBQ9Y3I0 505 aaKnown RBP25.26■■□□□ 1.63
CROCCP4-202ENST00000633627 A1BGP04217 495 aa25.24■■□□□ 1.63
CROCCP4-202ENST00000633627 KRT24Q2M2I5 525 aa25.24■■□□□ 1.63
CROCCP4-202ENST00000633627 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
CROCCP4-202ENST00000633627 SOS1Q07889 1333 aaPredicted RBP25.23■■□□□ 1.63
CROCCP4-202ENST00000633627 ADRA2BP18089 450 aa25.23■■□□□ 1.63
CROCCP4-202ENST00000633627 SPINK5Q9NQ38 1064 aaPredicted RBP25.23■■□□□ 1.63
CROCCP4-202ENST00000633627 PHF14O94880 888 aa25.22■■□□□ 1.63
CROCCP4-202ENST00000633627 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
CROCCP4-202ENST00000633627 EIF5P55010 431 aaKnown RBP25.21■■□□□ 1.63
CROCCP4-202ENST00000633627 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
CROCCP4-202ENST00000633627 SLC16A10Q8TF71 515 aa25.21■■□□□ 1.63
CROCCP4-202ENST00000633627 CANXP27824 592 aaKnown RBP25.2■■□□□ 1.62
CROCCP4-202ENST00000633627 ARHGEF1Q92888 912 aaKnown RBP25.2■■□□□ 1.62
CROCCP4-202ENST00000633627 NBPF26B4DH59 902 aa25.19■■□□□ 1.62
CROCCP4-202ENST00000633627 HOXB7P09629 217 aa25.19■■□□□ 1.62
CROCCP4-202ENST00000633627 NBPF10Q6P3W6 841 aaKnown RBP25.19■■□□□ 1.62
CROCCP4-202ENST00000633627 NBPF15Q8N660 670 aa25.19■■□□□ 1.62
CROCCP4-202ENST00000633627 IL6STP40189 918 aaPredicted RBP25.18■■□□□ 1.62
CROCCP4-202ENST00000633627 FANCIQ9NVI1 1328 aa25.17■■□□□ 1.62
CROCCP4-202ENST00000633627 ZBTB7AO95365 584 aa25.17■■□□□ 1.62
CROCCP4-202ENST00000633627 DUSP27Q5VZP5 1158 aa25.17■■□□□ 1.62
CROCCP4-202ENST00000633627 C8orf58Q8NAV2 365 aa25.17■■□□□ 1.62
CROCCP4-202ENST00000633627 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
CROCCP4-202ENST00000633627 MSH5O43196 834 aa25.16■■□□□ 1.62
CROCCP4-202ENST00000633627 C4AP0C0L4 1744 aa25.16■■□□□ 1.62
CROCCP4-202ENST00000633627 PIP4K2AP48426 406 aaPredicted RBP25.16■■□□□ 1.62
CROCCP4-202ENST00000633627 GOLGA2Q08379 1002 aa25.16■■□□□ 1.62
CROCCP4-202ENST00000633627 COL15A1P39059 1388 aa25.16■■□□□ 1.62
CROCCP4-202ENST00000633627 ERBB4Q15303 1308 aa25.15■■□□□ 1.62
CROCCP4-202ENST00000633627 EIF2S2P20042 333 aaKnown RBP25.15■■□□□ 1.62
CROCCP4-202ENST00000633627 RFC4P35249 363 aa25.14■■□□□ 1.62
CROCCP4-202ENST00000633627 TSPYL6Q8N831 410 aa25.14■■□□□ 1.62
CROCCP4-202ENST00000633627 MYH16Q9H6N6 1097 aa25.14■■□□□ 1.62
CROCCP4-202ENST00000633627 COL24A1Q17RW2 1714 aa25.14■■□□□ 1.61
CROCCP4-202ENST00000633627 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
CROCCP4-202ENST00000633627 PDIA6Q15084 440 aa25.13■■□□□ 1.61
CROCCP4-202ENST00000633627 ATF5Q9Y2D1 282 aaPredicted RBP25.13■■□□□ 1.61
CROCCP4-202ENST00000633627 ELL2O00472 640 aaPredicted RBP25.12■■□□□ 1.61
CROCCP4-202ENST00000633627 SLFN5Q08AF3 891 aa25.12■■□□□ 1.61
CROCCP4-202ENST00000633627 SPON1Q9HCB6 807 aa25.12■■□□□ 1.61
CROCCP4-202ENST00000633627 SRP68Q9UHB9 627 aaKnown RBP25.12■■□□□ 1.61
CROCCP4-202ENST00000633627 USP42Q9H9J4 1324 aaKnown RBP25.12■■□□□ 1.61
CROCCP4-202ENST00000633627 SRCAPQ6ZRS2 3230 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 A0A087WZG4 1122 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 E9PSI1 815 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 HDGFL1Q5TGJ6 251 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 LRP10Q7Z4F1 713 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 SGIP1Q9BQI5 828 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 NARFQ9UHQ1 456 aa25.11■■□□□ 1.61
CROCCP4-202ENST00000633627 GYS1P13807 737 aa25.1■■□□□ 1.61
CROCCP4-202ENST00000633627 PTGER2P43116 358 aa25.1■■□□□ 1.61
CROCCP4-202ENST00000633627 NECTIN2Q92692 538 aa25.1■■□□□ 1.61
CROCCP4-202ENST00000633627 CDCA7LQ96GN5 454 aa25.1■■□□□ 1.61
CROCCP4-202ENST00000633627 EXOSC9Q06265 439 aaKnown RBP25.09■■□□□ 1.61
CROCCP4-202ENST00000633627 PROSER3Q2NL68 480 aa25.09■■□□□ 1.61
CROCCP4-202ENST00000633627 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
CROCCP4-202ENST00000633627 ZNF330Q9Y3S2 320 aaPredicted RBP25.09■■□□□ 1.61
CROCCP4-202ENST00000633627 TWISTNBQ3B726 338 aaPredicted RBP25.08■■□□□ 1.61
CROCCP4-202ENST00000633627 MSL1Q68DK7 614 aa25.08■■□□□ 1.61
CROCCP4-202ENST00000633627 DDX21Q9NR30 783 aaKnown RBP eCLIP25.08■■□□□ 1.61
CROCCP4-202ENST00000633627 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
CROCCP4-202ENST00000633627 LRP5O75197 1615 aa25.08■■□□□ 1.6
CROCCP4-202ENST00000633627 ZPR1O75312 459 aa25.07■■□□□ 1.6
CROCCP4-202ENST00000633627 MYL6BP14649 208 aa25.07■■□□□ 1.6
CROCCP4-202ENST00000633627 USPL1Q5W0Q7 1092 aa25.07■■□□□ 1.6
CROCCP4-202ENST00000633627 BCL2L12Q9HB09 334 aa25.07■■□□□ 1.6
CROCCP4-202ENST00000633627 ANXA1P04083 346 aa25.06■■□□□ 1.6
CROCCP4-202ENST00000633627 NPM2Q86SE8 214 aaKnown RBP25.06■■□□□ 1.6
CROCCP4-202ENST00000633627 DZIP3Q86Y13 1208 aaKnown RBP25.06■■□□□ 1.6
CROCCP4-202ENST00000633627 NLGN1Q8N2Q7 840 aa25.06■■□□□ 1.6
CROCCP4-202ENST00000633627 CHPF2Q9P2E5 772 aa25.06■■□□□ 1.6
CROCCP4-202ENST00000633627 VAMP4O75379 141 aa25.05■■□□□ 1.6
CROCCP4-202ENST00000633627 CAMTA2O94983 1202 aa25.05■■□□□ 1.6
CROCCP4-202ENST00000633627 FKBP8Q14318 412 aa25.05■■□□□ 1.6
CROCCP4-202ENST00000633627 CHMP4AQ9BY43 222 aa25.05■■□□□ 1.6
CROCCP4-202ENST00000633627 DBF4Q9UBU7 674 aaPredicted RBP25.05■■□□□ 1.6
CROCCP4-202ENST00000633627 CCDC30Q5VVM6 783 aa25.03■■□□□ 1.6
CROCCP4-202ENST00000633627 TTLL7Q6ZT98 887 aa25.03■■□□□ 1.6
CROCCP4-202ENST00000633627 ZBED9Q6R2W3 1325 aa25.03■■□□□ 1.6
CROCCP4-202ENST00000633627 SCN7AQ01118 1682 aa25.03■■□□□ 1.6
CROCCP4-202ENST00000633627 ARXQ96QS3 562 aa25.02■■□□□ 1.6
CROCCP4-202ENST00000633627 BCORQ6W2J9 1755 aa25.01■■□□□ 1.59
CROCCP4-202ENST00000633627 RGL2O15211 777 aa25.01■■□□□ 1.59
CROCCP4-202ENST00000633627 POLD1P28340 1107 aa25■■□□□ 1.59
CROCCP4-202ENST00000633627 TM4SF1P30408 202 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms