RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 PLIN1O60240 522 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 LILRB3O75022 631 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 ZNF211Q13398 564 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-213ENST00000630925 SIM2Q14190 667 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-213ENST00000630925 SLFNL1Q499Z3 407 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 CRTC2Q53ET0 693 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-213ENST00000630925 FAM196BA6NMK8 535 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 ZNF76P36508 570 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 MMRN1Q13201 1228 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 TMEM95Q3KNT9 176 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 WDR75Q8IWA0 830 aaKnown RBP6.1□□□□□ -1.43
SDCBP-213ENST00000630925 NGDNQ8NEJ9 315 aaKnown RBP6.1□□□□□ -1.43
SDCBP-213ENST00000630925 NLRP7Q8WX94 980 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 C12orf49Q9H741 205 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 ENAMQ9NRM1 1142 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 A6NJY4 79 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 SPTLC1O15269 473 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 CAND2O75155 1236 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 SF3B2Q13435 895 aaKnown RBP6.1□□□□□ -1.43
SDCBP-213ENST00000630925 RAPGEF1Q13905 1077 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 CABP2Q9NPB3 220 aa6.1□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L15C9J2P7 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L10C9JJH3 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L13C9JLJ4 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L12C9JPN9 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L11C9JVI0 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L21D6R901 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L18D6R9N7 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L22D6RA61 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L17D6RBQ6 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L19D6RCP7 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L20D6RJB6 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 CBFA2T2O43439 604 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 BPNT1O95861 308 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 NOS2P35228 1153 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 ARHGAP4P98171 946 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 USP17L24Q0WX57 530 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 TBC1D10BQ4KMP7 808 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-213ENST00000630925 C1QTNF12Q5T7M4 302 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 L1TD1Q5T7N2 865 aaKnown RBP6.09□□□□□ -1.43
SDCBP-213ENST00000630925 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-213ENST00000630925 CEP120Q8N960 986 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 PCGF6Q9BYE7 350 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 ANO2Q9NQ90 1003 aa6.09□□□□□ -1.43
SDCBP-213ENST00000630925 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 TBX3O15119 743 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 ABL1P00519 1130 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 TGFB3P10600 412 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 ATN1P54259 1190 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-213ENST00000630925 C10orf62Q5T681 223 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-213ENST00000630925 GLYCTKQ8IVS8 523 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 LRRC27Q9C0I9 530 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 TMX1Q9H3N1 280 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 RNF19AQ9NV58 838 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 INPP5FQ9Y2H2 1132 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 TERF1P54274 439 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 SEMA3FQ13275 785 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 NFE2Q16621 373 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-213ENST00000630925 RSBN1LQ6PCB5 846 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-213ENST00000630925 CHPFQ8IZ52 775 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 SPIRE2Q8WWL2 714 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 AKAP2Q9Y2D5 859 aa6.08□□□□□ -1.44
SDCBP-213ENST00000630925 AQRO60306 1485 aaKnown RBP eCLIP6.08□□□□□ -1.44
SDCBP-213ENST00000630925 CCDC163A0A0D9SF12 145 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 TSPAN6O43657 245 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 PRMT3O60678 531 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 HIP1RO75146 1068 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 PDE3BQ13370 1112 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 DSG2Q14126 1118 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 BRD3Q15059 726 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 LONRF1Q17RB8 773 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 KANK3Q6NY19 840 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 CC2D1AQ6P1N0 951 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-213ENST00000630925 PAF1Q8N7H5 531 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 ZNF700Q9H0M5 742 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 AS3MTQ9HBK9 375 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 HOMER2Q9NSB8 354 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 PARP2Q9UGN5 583 aa6.07□□□□□ -1.44
SDCBP-213ENST00000630925 USP17L3A6NCW0 530 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 USP17L4A6NCW7 530 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 TCERG1O14776 1098 aaKnown RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 C21orf2O43822 256 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 KRT18P05783 430 aaKnown RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 PTGER2P43116 358 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 RACK1P63244 317 aaKnown RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 EXOSC10Q01780 885 aaKnown RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 PTK7Q13308 1070 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 INO80DQ53TQ3 878 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 USP17L2Q6R6M4 530 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 TAS1R3Q7RTX0 852 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 USP17L1Q7RTZ2 530 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 TMC4Q7Z404 712 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 PGBD3Q8N328 593 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 STAC3Q96MF2 364 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 NPDC1Q9NQX5 325 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 CWC25Q9NXE8 425 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 NOL7Q9UMY1 257 aaKnown RBP6.06□□□□□ -1.44
SDCBP-213ENST00000630925 CFTRP13569 1480 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 PIK3CDO00329 1044 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms