RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 HOXB7P09629 217 aa21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 HMGB2P26583 209 aaKnown RBP21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 DUSP27Q5VZP5 1158 aa21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 TSPYL6Q8N831 410 aa21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 AKT1S1Q96B36 256 aa21.56■■□□□ 1.04
CDC42EP4-209ENST00000630622 STARD3NLO95772 234 aa21.55■■□□□ 1.04
CDC42EP4-209ENST00000630622 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-209ENST00000630622 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-209ENST00000630622 RC3H1Q5TC82 1133 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-209ENST00000630622 YTHDC1Q96MU7 727 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-209ENST00000630622 QSER1Q2KHR3 1735 aa21.55■■□□□ 1.04
CDC42EP4-209ENST00000630622 INTS5Q6P9B9 1019 aaKnown RBP21.54■■□□□ 1.04
CDC42EP4-209ENST00000630622 CCDC87Q9NVE4 849 aa21.53■■□□□ 1.04
CDC42EP4-209ENST00000630622 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
CDC42EP4-209ENST00000630622 ELL2O00472 640 aaPredicted RBP21.52■■□□□ 1.04
CDC42EP4-209ENST00000630622 A1BGP04217 495 aa21.51■■□□□ 1.03
CDC42EP4-209ENST00000630622 SLC15A2Q16348 729 aa21.51■■□□□ 1.03
CDC42EP4-209ENST00000630622 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP4-209ENST00000630622 AMIGO3Q86WK7 504 aa21.51■■□□□ 1.03
CDC42EP4-209ENST00000630622 ZBTB1Q9Y2K1 713 aa21.51■■□□□ 1.03
CDC42EP4-209ENST00000630622 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
CDC42EP4-209ENST00000630622 AK7Q96M32 723 aa21.5■■□□□ 1.03
CDC42EP4-209ENST00000630622 STK32BQ9NY57 414 aa21.5■■□□□ 1.03
CDC42EP4-209ENST00000630622 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
CDC42EP4-209ENST00000630622 GNPATO15228 680 aa21.49■■□□□ 1.03
CDC42EP4-209ENST00000630622 VAMP4O75379 141 aa21.49■■□□□ 1.03
CDC42EP4-209ENST00000630622 NBPF14Q5TI25 921 aa21.49■■□□□ 1.03
CDC42EP4-209ENST00000630622 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
CDC42EP4-209ENST00000630622 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
CDC42EP4-209ENST00000630622 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
CDC42EP4-209ENST00000630622 HDGFL1Q5TGJ6 251 aa21.48■■□□□ 1.03
CDC42EP4-209ENST00000630622 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
CDC42EP4-209ENST00000630622 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
CDC42EP4-209ENST00000630622 C4AP0C0L4 1744 aa21.47■■□□□ 1.03
CDC42EP4-209ENST00000630622 PIP4K2AP48426 406 aaPredicted RBP21.47■■□□□ 1.03
CDC42EP4-209ENST00000630622 PDIA6Q15084 440 aa21.47■■□□□ 1.03
CDC42EP4-209ENST00000630622 SMIM5Q71RC9 77 aa21.47■■□□□ 1.03
CDC42EP4-209ENST00000630622 TFCP2L1Q9NZI6 479 aa21.47■■□□□ 1.03
CDC42EP4-209ENST00000630622 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
CDC42EP4-209ENST00000630622 RTCBQ9Y3I0 505 aaKnown RBP21.46■■□□□ 1.03
CDC42EP4-209ENST00000630622 SSFA2P28290 1259 aa21.45■■□□□ 1.02
CDC42EP4-209ENST00000630622 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP4-209ENST00000630622 EIF5P55010 431 aaKnown RBP21.45■■□□□ 1.02
CDC42EP4-209ENST00000630622 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
CDC42EP4-209ENST00000630622 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
CDC42EP4-209ENST00000630622 PNPLA7Q6ZV29 1317 aa21.45■■□□□ 1.02
CDC42EP4-209ENST00000630622 CASZ1Q86V15 1759 aa21.44■■□□□ 1.02
CDC42EP4-209ENST00000630622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.44■■□□□ 1.02
CDC42EP4-209ENST00000630622 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDC42EP4-209ENST00000630622 CHPF2Q9P2E5 772 aa21.44■■□□□ 1.02
CDC42EP4-209ENST00000630622 CACNA1FO60840 1977 aa21.44■■□□□ 1.02
CDC42EP4-209ENST00000630622 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-209ENST00000630622 ADRA2BP18089 450 aa21.43■■□□□ 1.02
CDC42EP4-209ENST00000630622 CCDC30Q5VVM6 783 aa21.43■■□□□ 1.02
CDC42EP4-209ENST00000630622 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
CDC42EP4-209ENST00000630622 COL15A1P39059 1388 aa21.43■■□□□ 1.02
CDC42EP4-209ENST00000630622 PHF14O94880 888 aa21.42■■□□□ 1.02
CDC42EP4-209ENST00000630622 ANXA1P04083 346 aa21.42■■□□□ 1.02
CDC42EP4-209ENST00000630622 R3HDM1Q15032 1099 aaKnown RBP21.42■■□□□ 1.02
CDC42EP4-209ENST00000630622 COL23A1Q86Y22 540 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP4-209ENST00000630622 DBF4Q9UBU7 674 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP4-209ENST00000630622 MYL6BP14649 208 aa21.41■■□□□ 1.02
CDC42EP4-209ENST00000630622 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
CDC42EP4-209ENST00000630622 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
CDC42EP4-209ENST00000630622 TRAPPC3LQ5T215 181 aa21.4■■□□□ 1.02
CDC42EP4-209ENST00000630622 ARHGEF1Q92888 912 aaKnown RBP21.4■■□□□ 1.02
CDC42EP4-209ENST00000630622 ZNF428Q96B54 188 aa21.4■■□□□ 1.02
CDC42EP4-209ENST00000630622 PDGFDQ9GZP0 370 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP4-209ENST00000630622 BCORQ6W2J9 1755 aa21.4■■□□□ 1.02
CDC42EP4-209ENST00000630622 PSDA5PKW4 1024 aaPredicted RBP21.39■■□□□ 1.01
CDC42EP4-209ENST00000630622 SCN7AQ01118 1682 aa21.39■■□□□ 1.01
CDC42EP4-209ENST00000630622 STK31Q9BXU1 1019 aa21.38■■□□□ 1.01
CDC42EP4-209ENST00000630622 HYPKQ9NX55 129 aa21.38■■□□□ 1.01
CDC42EP4-209ENST00000630622 ZNF330Q9Y3S2 320 aaPredicted RBP21.38■■□□□ 1.01
CDC42EP4-209ENST00000630622 A0A087WZG4 1122 aa21.37■■□□□ 1.01
CDC42EP4-209ENST00000630622 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
CDC42EP4-209ENST00000630622 RFC4P35249 363 aa21.36■■□□□ 1.01
CDC42EP4-209ENST00000630622 TTLL7Q6ZT98 887 aa21.36■■□□□ 1.01
CDC42EP4-209ENST00000630622 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
CDC42EP4-209ENST00000630622 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 COPS6Q7L5N1 327 aa21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 DZIP3Q86Y13 1208 aaKnown RBP21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 XAGE3Q8WTP9 111 aa21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 PHAXQ9H814 394 aaKnown RBP21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 SRP68Q9UHB9 627 aaKnown RBP21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 NARFQ9UHQ1 456 aa21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 TBC1D2BQ9UPU7 963 aa21.35■■□□□ 1.01
CDC42EP4-209ENST00000630622 CAMTA2O94983 1202 aa21.34■■□□□ 1.01
CDC42EP4-209ENST00000630622 RARSP54136 660 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-209ENST00000630622 G2E3Q7L622 706 aa21.34■■□□□ 1.01
CDC42EP4-209ENST00000630622 NPM2Q86SE8 214 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-209ENST00000630622 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
CDC42EP4-209ENST00000630622 MSH5O43196 834 aa21.33■■□□□ 1.01
CDC42EP4-209ENST00000630622 MRPL50Q8N5N7 158 aaKnown RBP21.33■■□□□ 1.01
CDC42EP4-209ENST00000630622 NUP98P52948 1817 aa21.33■■□□□ 1.01
CDC42EP4-209ENST00000630622 AIMP1Q12904 312 aaKnown RBP21.32■■□□□ 1
CDC42EP4-209ENST00000630622 SLC16A10Q8TF71 515 aa21.32■■□□□ 1
CDC42EP4-209ENST00000630622 BCL2L12Q9HB09 334 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms