RNA–Protein interactions for RNA: ENST00000629009.2

CCDC163-206, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-206ENST00000629009 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
CCDC163-206ENST00000629009 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
CCDC163-206ENST00000629009 RFX1P22670 979 aa11.32□□□□□ -0.6
CCDC163-206ENST00000629009 TNNT2P45379 298 aaPredicted RBP11.32□□□□□ -0.6
CCDC163-206ENST00000629009 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
CCDC163-206ENST00000629009 DRC1Q96MC2 740 aa11.32□□□□□ -0.6
CCDC163-206ENST00000629009 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
CCDC163-206ENST00000629009 GDPD2Q9HCC8 539 aa11.32□□□□□ -0.6
CCDC163-206ENST00000629009 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
CCDC163-206ENST00000629009 PEAK1Q9H792 1746 aa11.31□□□□□ -0.6
CCDC163-206ENST00000629009 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
CCDC163-206ENST00000629009 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
CCDC163-206ENST00000629009 CASZ1Q86V15 1759 aa11.31□□□□□ -0.6
CCDC163-206ENST00000629009 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
CCDC163-206ENST00000629009 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
CCDC163-206ENST00000629009 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
CCDC163-206ENST00000629009 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
CCDC163-206ENST00000629009 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 NLRP2Q9NX02 1062 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 SBF2Q86WG5 1849 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 EZH2Q15910 746 aaKnown RBP11.3□□□□□ -0.6
CCDC163-206ENST00000629009 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 UBE2Q2Q8WVN8 375 aa11.3□□□□□ -0.6
CCDC163-206ENST00000629009 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
CCDC163-206ENST00000629009 A0A0G2JS52 829 aa11.29□□□□□ -0.6
CCDC163-206ENST00000629009 FCHSD2O94868 740 aa11.29□□□□□ -0.6
CCDC163-206ENST00000629009 VRTNQ9H8Y1 702 aa11.29□□□□□ -0.6
CCDC163-206ENST00000629009 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.6
CCDC163-206ENST00000629009 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.6
CCDC163-206ENST00000629009 PPP2R1AP30153 589 aa11.27□□□□□ -0.6
CCDC163-206ENST00000629009 MTHFSP49914 203 aa11.27□□□□□ -0.6
CCDC163-206ENST00000629009 CAMKK2Q96RR4 588 aa11.27□□□□□ -0.6
CCDC163-206ENST00000629009 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.6
CCDC163-206ENST00000629009 PARP4Q9UKK3 1724 aaKnown RBP11.27□□□□□ -0.61
CCDC163-206ENST00000629009 UTRNP46939 3433 aa11.27□□□□□ -0.61
CCDC163-206ENST00000629009 IL2RBP14784 551 aa11.27□□□□□ -0.61
CCDC163-206ENST00000629009 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
CCDC163-206ENST00000629009 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
CCDC163-206ENST00000629009 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
CCDC163-206ENST00000629009 ABL2P42684 1182 aa11.26□□□□□ -0.61
CCDC163-206ENST00000629009 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
CCDC163-206ENST00000629009 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
CCDC163-206ENST00000629009 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
CCDC163-206ENST00000629009 DDB1Q16531 1140 aa11.26□□□□□ -0.61
CCDC163-206ENST00000629009 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
CCDC163-206ENST00000629009 EXOC5O00471 708 aa11.25□□□□□ -0.61
CCDC163-206ENST00000629009 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
CCDC163-206ENST00000629009 CCDC184Q52MB2 194 aa11.25□□□□□ -0.61
CCDC163-206ENST00000629009 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
CCDC163-206ENST00000629009 SREK1Q8WXA9 508 aaKnown RBP11.25□□□□□ -0.61
CCDC163-206ENST00000629009 RFC5P40937 340 aa11.24□□□□□ -0.61
CCDC163-206ENST00000629009 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
CCDC163-206ENST00000629009 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
CCDC163-206ENST00000629009 EYA1Q99502 592 aa11.24□□□□□ -0.61
CCDC163-206ENST00000629009 PLEKHG2Q9H7P9 1386 aa11.24□□□□□ -0.61
CCDC163-206ENST00000629009 CLCN1P35523 988 aa11.24□□□□□ -0.61
CCDC163-206ENST00000629009 RAPGEF4Q8WZA2 1011 aa11.24□□□□□ -0.61
CCDC163-206ENST00000629009 CFAP53Q96M91 514 aa11.24□□□□□ -0.61
CCDC163-206ENST00000629009 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
CCDC163-206ENST00000629009 TNS2Q63HR2 1409 aa11.23□□□□□ -0.61
CCDC163-206ENST00000629009 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
CCDC163-206ENST00000629009 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
CCDC163-206ENST00000629009 TCF3P15923 654 aa11.23□□□□□ -0.61
CCDC163-206ENST00000629009 IL13P35225 146 aa11.23□□□□□ -0.61
CCDC163-206ENST00000629009 RGPD2P0DJD1 1756 aa11.23□□□□□ -0.61
CCDC163-206ENST00000629009 TRIM37O94972 964 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 TATP17735 454 aaPredicted RBP11.22□□□□□ -0.61
CCDC163-206ENST00000629009 FAM196AQ6ZSG2 479 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 FAM9BQ8IZU0 186 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
CCDC163-206ENST00000629009 BEGAINQ9BUH8 593 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 PRM3Q9NNZ6 103 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
CCDC163-206ENST00000629009 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
CCDC163-206ENST00000629009 TMEM259Q4ZIN3 620 aa11.21□□□□□ -0.61
CCDC163-206ENST00000629009 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
CCDC163-206ENST00000629009 GNEQ9Y223 722 aaKnown RBP11.21□□□□□ -0.61
CCDC163-206ENST00000629009 BCL9O00512 1426 aa11.21□□□□□ -0.61
CCDC163-206ENST00000629009 MEGF6O75095 1541 aa11.21□□□□□ -0.62
CCDC163-206ENST00000629009 COL3A1P02461 1466 aaPredicted RBP11.21□□□□□ -0.62
CCDC163-206ENST00000629009 SSTR3P32745 418 aaPredicted RBP11.2□□□□□ -0.62
CCDC163-206ENST00000629009 CERS3Q8IU89 383 aa11.2□□□□□ -0.62
CCDC163-206ENST00000629009 ZCRB1Q8TBF4 217 aaKnown RBP11.2□□□□□ -0.62
CCDC163-206ENST00000629009 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
CCDC163-206ENST00000629009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC163-206ENST00000629009 KDRP35968 1356 aa11.2□□□□□ -0.62
CCDC163-206ENST00000629009 ERCC3P19447 782 aa11.2□□□□□ -0.62
CCDC163-206ENST00000629009 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
CCDC163-206ENST00000629009 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
CCDC163-206ENST00000629009 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
CCDC163-206ENST00000629009 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
CCDC163-206ENST00000629009 APBA3O96018 575 aa11.19□□□□□ -0.62
CCDC163-206ENST00000629009 DSG3P32926 999 aa11.19□□□□□ -0.62
CCDC163-206ENST00000629009 WDR43Q15061 677 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC163-206ENST00000629009 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
CCDC163-206ENST00000629009 NUDCQ9Y266 331 aa11.19□□□□□ -0.62
CCDC163-206ENST00000629009 SULT6B1Q6IMI4 303 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms