RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
NR1I3-235ENST00000628566 COL23A1Q86Y22 540 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-235ENST00000628566 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
NR1I3-235ENST00000628566 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
NR1I3-235ENST00000628566 TJP1Q07157 1748 aa10.16□□□□□ -0.78
NR1I3-235ENST00000628566 ZPR1O75312 459 aa10.15□□□□□ -0.78
NR1I3-235ENST00000628566 NLGN1Q8N2Q7 840 aa10.15□□□□□ -0.78
NR1I3-235ENST00000628566 CFAP44Q96MT7 982 aa10.15□□□□□ -0.78
NR1I3-235ENST00000628566 IFT57Q9NWB7 429 aa10.15□□□□□ -0.78
NR1I3-235ENST00000628566 MIS18AQ9NYP9 233 aa10.15□□□□□ -0.78
NR1I3-235ENST00000628566 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
NR1I3-235ENST00000628566 UBR3Q6ZT12 1888 aa10.15□□□□□ -0.79
NR1I3-235ENST00000628566 CANXP27824 592 aaKnown RBP10.14□□□□□ -0.79
NR1I3-235ENST00000628566 IL6STP40189 918 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-235ENST00000628566 MAPK8IP2Q13387 824 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-235ENST00000628566 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
NR1I3-235ENST00000628566 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-235ENST00000628566 TUBGCP6Q96RT7 1819 aa10.14□□□□□ -0.79
NR1I3-235ENST00000628566 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
NR1I3-235ENST00000628566 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
NR1I3-235ENST00000628566 CHL1O00533 1208 aa10.13□□□□□ -0.79
NR1I3-235ENST00000628566 KCNQ3O43525 872 aa10.13□□□□□ -0.79
NR1I3-235ENST00000628566 EIF4A1P60842 406 aaKnown RBP10.13□□□□□ -0.79
NR1I3-235ENST00000628566 INTS5Q6P9B9 1019 aaKnown RBP10.13□□□□□ -0.79
NR1I3-235ENST00000628566 ARXQ96QS3 562 aa10.13□□□□□ -0.79
NR1I3-235ENST00000628566 COL15A1P39059 1388 aa10.13□□□□□ -0.79
NR1I3-235ENST00000628566 SOS1Q07889 1333 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-235ENST00000628566 IL16Q14005 1332 aa10.12□□□□□ -0.79
NR1I3-235ENST00000628566 ERBB4Q15303 1308 aa10.12□□□□□ -0.79
NR1I3-235ENST00000628566 GIGYF1O75420 1035 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-235ENST00000628566 HOXB7P09629 217 aa10.12□□□□□ -0.79
NR1I3-235ENST00000628566 WDR63Q8IWG1 891 aa10.12□□□□□ -0.79
NR1I3-235ENST00000628566 WWC1Q8IX03 1113 aa10.12□□□□□ -0.79
NR1I3-235ENST00000628566 PDGFDQ9GZP0 370 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-235ENST00000628566 ZBTB1Q9Y2K1 713 aa10.12□□□□□ -0.79
NR1I3-235ENST00000628566 LAMB4A4D0S4 1761 aa10.11□□□□□ -0.79
NR1I3-235ENST00000628566 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
NR1I3-235ENST00000628566 ZNF652Q9Y2D9 606 aa10.11□□□□□ -0.79
NR1I3-235ENST00000628566 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-235ENST00000628566 USP16Q9Y5T5 823 aa10.11□□□□□ -0.79
NR1I3-235ENST00000628566 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
NR1I3-235ENST00000628566 A1BGP04217 495 aa10.1□□□□□ -0.79
NR1I3-235ENST00000628566 PTGER2P43116 358 aa10.1□□□□□ -0.79
NR1I3-235ENST00000628566 EIF5P55010 431 aaKnown RBP10.1□□□□□ -0.79
NR1I3-235ENST00000628566 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
NR1I3-235ENST00000628566 MYH16Q9H6N6 1097 aa10.1□□□□□ -0.79
NR1I3-235ENST00000628566 MBIPQ9NS73 344 aa10.1□□□□□ -0.79
NR1I3-235ENST00000628566 NARFQ9UHQ1 456 aa10.1□□□□□ -0.79
NR1I3-235ENST00000628566 PARP3Q9Y6F1 533 aa10.1□□□□□ -0.79
NR1I3-235ENST00000628566 MYH14Q7Z406 1995 aaKnown RBP10.09□□□□□ -0.79
NR1I3-235ENST00000628566 RGL2O15211 777 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 MMP10P09238 476 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 GYS1P13807 737 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 EIF2S2P20042 333 aaKnown RBP10.09□□□□□ -0.79
NR1I3-235ENST00000628566 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 KIF6Q6ZMV9 814 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 MIER1Q8N108 512 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
NR1I3-235ENST00000628566 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 PRAMEF22A3QJZ6 481 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 NPHP1O15259 732 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 ZNF853P0CG23 659 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 GOLGA2Q08379 1002 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 AMIGO3Q86WK7 504 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 SGIP1Q9BQI5 828 aa10.08□□□□□ -0.8
NR1I3-235ENST00000628566 MYL6BP14649 208 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 CCDC30Q5VVM6 783 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 DUSP27Q5VZP5 1158 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 CLEC4GQ6UXB4 293 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 SMIM5Q71RC9 77 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 DBF4Q9UBU7 674 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-235ENST00000628566 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
NR1I3-235ENST00000628566 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 COL24A1Q17RW2 1714 aa10.07□□□□□ -0.8
NR1I3-235ENST00000628566 FKBP8Q14318 412 aa10.06□□□□□ -0.8
NR1I3-235ENST00000628566 SETDB2Q96T68 719 aa10.06□□□□□ -0.8
NR1I3-235ENST00000628566 STK31Q9BXU1 1019 aa10.06□□□□□ -0.8
NR1I3-235ENST00000628566 FHDC1Q9C0D6 1143 aaPredicted RBP10.06□□□□□ -0.8
NR1I3-235ENST00000628566 DDX21Q9NR30 783 aaKnown RBP eCLIP10.06□□□□□ -0.8
NR1I3-235ENST00000628566 HYPKQ9NX55 129 aa10.06□□□□□ -0.8
NR1I3-235ENST00000628566 SENP3-EIF4A1A0A087X0R7 540 aa10.05□□□□□ -0.8
NR1I3-235ENST00000628566 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
NR1I3-235ENST00000628566 ERVV-1B6SEH8 477 aa10.05□□□□□ -0.8
NR1I3-235ENST00000628566 E9PSI1 815 aa10.05□□□□□ -0.8
NR1I3-235ENST00000628566 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
NR1I3-235ENST00000628566 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
NR1I3-235ENST00000628566 CARMIL3Q8ND23 1372 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 SCN7AQ01118 1682 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 ELL2O00472 640 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-235ENST00000628566 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-235ENST00000628566 TWISTNBQ3B726 338 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-235ENST00000628566 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 BICDL1Q6ZP65 573 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 TSR2Q969E8 191 aaKnown RBP10.04□□□□□ -0.8
NR1I3-235ENST00000628566 SYT17Q9BSW7 474 aa10.04□□□□□ -0.8
NR1I3-235ENST00000628566 MAP3K15Q6ZN16 1313 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms