RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 STARD3NLO95772 234 aa24.38■■□□□ 1.49
MECP2-216ENST00000627864 EXOSC9Q06265 439 aaKnown RBP24.38■■□□□ 1.49
MECP2-216ENST00000627864 NBPF14Q5TI25 921 aa24.38■■□□□ 1.49
MECP2-216ENST00000627864 UBR3Q6ZT12 1888 aa24.37■■□□□ 1.49
MECP2-216ENST00000627864 CRKLP46109 303 aaKnown RBP24.37■■□□□ 1.49
MECP2-216ENST00000627864 STK32BQ9NY57 414 aa24.37■■□□□ 1.49
MECP2-216ENST00000627864 EIF2S2P20042 333 aaKnown RBP24.36■■□□□ 1.49
MECP2-216ENST00000627864 TRMT2AQ8IZ69 625 aaKnown RBP24.36■■□□□ 1.49
MECP2-216ENST00000627864 TSPYL6Q8N831 410 aa24.36■■□□□ 1.49
MECP2-216ENST00000627864 AK7Q96M32 723 aa24.36■■□□□ 1.49
MECP2-216ENST00000627864 ZNF827Q17R98 1081 aa24.35■■□□□ 1.49
MECP2-216ENST00000627864 RC3H1Q5TC82 1133 aaKnown RBP24.35■■□□□ 1.49
MECP2-216ENST00000627864 AKT1S1Q96B36 256 aa24.35■■□□□ 1.49
MECP2-216ENST00000627864 ANO8Q9HCE9 1232 aaPredicted RBP24.35■■□□□ 1.49
MECP2-216ENST00000627864 CCDC87Q9NVE4 849 aa24.35■■□□□ 1.49
MECP2-216ENST00000627864 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
MECP2-216ENST00000627864 A1BGP04217 495 aa24.34■■□□□ 1.49
MECP2-216ENST00000627864 NECTIN2Q92692 538 aa24.34■■□□□ 1.49
MECP2-216ENST00000627864 HOXB7P09629 217 aa24.33■■□□□ 1.49
MECP2-216ENST00000627864 SLC15A2Q16348 729 aa24.33■■□□□ 1.49
MECP2-216ENST00000627864 TWISTNBQ3B726 338 aaPredicted RBP24.33■■□□□ 1.49
MECP2-216ENST00000627864 INTS5Q6P9B9 1019 aaKnown RBP24.33■■□□□ 1.49
MECP2-216ENST00000627864 GNPATO15228 680 aa24.32■■□□□ 1.48
MECP2-216ENST00000627864 CANXP27824 592 aaKnown RBP24.32■■□□□ 1.48
MECP2-216ENST00000627864 TFCP2L1Q9NZI6 479 aa24.32■■□□□ 1.48
MECP2-216ENST00000627864 CACNA1FO60840 1977 aa24.32■■□□□ 1.48
MECP2-216ENST00000627864 QSER1Q2KHR3 1735 aa24.32■■□□□ 1.48
MECP2-216ENST00000627864 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
MECP2-216ENST00000627864 RPS6KA4O75676 772 aa24.3■■□□□ 1.48
MECP2-216ENST00000627864 PIP4K2AP48426 406 aaPredicted RBP24.3■■□□□ 1.48
MECP2-216ENST00000627864 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
MECP2-216ENST00000627864 SOS1Q07889 1333 aaPredicted RBP24.3■■□□□ 1.48
MECP2-216ENST00000627864 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
MECP2-216ENST00000627864 RTCBQ9Y3I0 505 aaKnown RBP24.29■■□□□ 1.48
MECP2-216ENST00000627864 VAMP4O75379 141 aa24.28■■□□□ 1.48
MECP2-216ENST00000627864 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
MECP2-216ENST00000627864 PHF14O94880 888 aa24.27■■□□□ 1.48
MECP2-216ENST00000627864 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
MECP2-216ENST00000627864 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
MECP2-216ENST00000627864 ZNF330Q9Y3S2 320 aaPredicted RBP24.27■■□□□ 1.48
MECP2-216ENST00000627864 MYL6BP14649 208 aa24.26■■□□□ 1.47
MECP2-216ENST00000627864 R3HDM1Q15032 1099 aaKnown RBP24.26■■□□□ 1.47
MECP2-216ENST00000627864 AMIGO3Q86WK7 504 aa24.26■■□□□ 1.47
MECP2-216ENST00000627864 CHMP4AQ9BY43 222 aa24.26■■□□□ 1.47
MECP2-216ENST00000627864 C4AP0C0L4 1744 aa24.25■■□□□ 1.47
MECP2-216ENST00000627864 TCERG1O14776 1098 aaKnown RBP24.25■■□□□ 1.47
MECP2-216ENST00000627864 CCDC30Q5VVM6 783 aa24.25■■□□□ 1.47
MECP2-216ENST00000627864 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
MECP2-216ENST00000627864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
MECP2-216ENST00000627864 PSDA5PKW4 1024 aaPredicted RBP24.24■■□□□ 1.47
MECP2-216ENST00000627864 ANXA1P04083 346 aa24.24■■□□□ 1.47
MECP2-216ENST00000627864 IL6STP40189 918 aaPredicted RBP24.24■■□□□ 1.47
MECP2-216ENST00000627864 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
MECP2-216ENST00000627864 CHPF2Q9P2E5 772 aa24.24■■□□□ 1.47
MECP2-216ENST00000627864 PNPLA7Q6ZV29 1317 aa24.24■■□□□ 1.47
MECP2-216ENST00000627864 MSH5O43196 834 aa24.23■■□□□ 1.47
MECP2-216ENST00000627864 SSFA2P28290 1259 aa24.23■■□□□ 1.47
MECP2-216ENST00000627864 EIF5P55010 431 aaKnown RBP24.23■■□□□ 1.47
MECP2-216ENST00000627864 PDIA6Q15084 440 aa24.23■■□□□ 1.47
MECP2-216ENST00000627864 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
MECP2-216ENST00000627864 FLAD1Q8NFF5 587 aa24.23■■□□□ 1.47
MECP2-216ENST00000627864 DDX21Q9NR30 783 aaKnown RBP eCLIP24.23■■□□□ 1.47
MECP2-216ENST00000627864 DBF4Q9UBU7 674 aaPredicted RBP24.23■■□□□ 1.47
MECP2-216ENST00000627864 PROSER3Q2NL68 480 aa24.22■■□□□ 1.47
MECP2-216ENST00000627864 COL23A1Q86Y22 540 aaPredicted RBP24.22■■□□□ 1.47
MECP2-216ENST00000627864 ARHGEF1Q92888 912 aaKnown RBP24.22■■□□□ 1.47
MECP2-216ENST00000627864 ARXQ96QS3 562 aa24.22■■□□□ 1.47
MECP2-216ENST00000627864 COL15A1P39059 1388 aa24.21■■□□□ 1.47
MECP2-216ENST00000627864 STK31Q9BXU1 1019 aa24.21■■□□□ 1.47
MECP2-216ENST00000627864 ADRA2BP18089 450 aa24.2■■□□□ 1.46
MECP2-216ENST00000627864 A0A087WZG4 1122 aa24.19■■□□□ 1.46
MECP2-216ENST00000627864 CT47B1P0C2W7 299 aaPredicted RBP24.19■■□□□ 1.46
MECP2-216ENST00000627864 RFC4P35249 363 aa24.19■■□□□ 1.46
MECP2-216ENST00000627864 PDGFDQ9GZP0 370 aaPredicted RBP24.18■■□□□ 1.46
MECP2-216ENST00000627864 HYPKQ9NX55 129 aa24.18■■□□□ 1.46
MECP2-216ENST00000627864 TBC1D2BQ9UPU7 963 aa24.18■■□□□ 1.46
MECP2-216ENST00000627864 CASZ1Q86V15 1759 aa24.18■■□□□ 1.46
MECP2-216ENST00000627864 NUP98P52948 1817 aa24.17■■□□□ 1.46
MECP2-216ENST00000627864 SLC4A2P04920 1241 aa24.17■■□□□ 1.46
MECP2-216ENST00000627864 AIMP1Q12904 312 aaKnown RBP24.17■■□□□ 1.46
MECP2-216ENST00000627864 DZIP3Q86Y13 1208 aaKnown RBP24.17■■□□□ 1.46
MECP2-216ENST00000627864 LRP10Q7Z4F1 713 aa24.16■■□□□ 1.46
MECP2-216ENST00000627864 XAGE3Q8WTP9 111 aa24.16■■□□□ 1.46
MECP2-216ENST00000627864 ZNF428Q96B54 188 aa24.16■■□□□ 1.46
MECP2-216ENST00000627864 ZPR1O75312 459 aa24.15■■□□□ 1.46
MECP2-216ENST00000627864 TTLL7Q6ZT98 887 aa24.15■■□□□ 1.46
MECP2-216ENST00000627864 COPS6Q7L5N1 327 aa24.15■■□□□ 1.46
MECP2-216ENST00000627864 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
MECP2-216ENST00000627864 SRP68Q9UHB9 627 aaKnown RBP24.15■■□□□ 1.46
MECP2-216ENST00000627864 BCORQ6W2J9 1755 aa24.15■■□□□ 1.46
MECP2-216ENST00000627864 SSH1Q8WYL5 1049 aa24.14■■□□□ 1.45
MECP2-216ENST00000627864 NARFQ9UHQ1 456 aa24.14■■□□□ 1.45
MECP2-216ENST00000627864 KIF6Q6ZMV9 814 aa24.13■■□□□ 1.45
MECP2-216ENST00000627864 G2E3Q7L622 706 aa24.13■■□□□ 1.45
MECP2-216ENST00000627864 USP42Q9H9J4 1324 aaKnown RBP24.12■■□□□ 1.45
MECP2-216ENST00000627864 SCN7AQ01118 1682 aa24.12■■□□□ 1.45
MECP2-216ENST00000627864 ALDH1L2Q3SY69 923 aa24.12■■□□□ 1.45
MECP2-216ENST00000627864 USPL1Q5W0Q7 1092 aa24.12■■□□□ 1.45
MECP2-216ENST00000627864 BCL2L13Q9BXK5 485 aa24.12■■□□□ 1.45
MECP2-216ENST00000627864 RARSP54136 660 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms