RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 LINC00116Q8NCU8 138 aa24.77■■□□□ 1.56
CNOT9-209ENST00000627282 SGIP1Q9BQI5 828 aa24.77■■□□□ 1.56
CNOT9-209ENST00000627282 MBIPQ9NS73 344 aa24.77■■□□□ 1.56
CNOT9-209ENST00000627282 EIF4A1P60842 406 aaKnown RBP24.75■■□□□ 1.55
CNOT9-209ENST00000627282 IRX6P78412 446 aaPredicted RBP24.75■■□□□ 1.55
CNOT9-209ENST00000627282 CDCA7LQ96GN5 454 aa24.75■■□□□ 1.55
CNOT9-209ENST00000627282 AK7Q96M32 723 aa24.75■■□□□ 1.55
CNOT9-209ENST00000627282 COL23A1Q86Y22 540 aaPredicted RBP24.75■■□□□ 1.55
CNOT9-209ENST00000627282 FMNL2Q96PY5 1086 aa24.75■■□□□ 1.55
CNOT9-209ENST00000627282 HEG1Q9ULI3 1381 aa24.74■■□□□ 1.55
CNOT9-209ENST00000627282 FLAD1Q8NFF5 587 aa24.74■■□□□ 1.55
CNOT9-209ENST00000627282 TSR2Q969E8 191 aaKnown RBP24.73■■□□□ 1.55
CNOT9-209ENST00000627282 UBR3Q6ZT12 1888 aa24.72■■□□□ 1.55
CNOT9-209ENST00000627282 VSIG10Q8N0Z9 540 aa24.72■■□□□ 1.55
CNOT9-209ENST00000627282 TJP1Q07157 1748 aa24.72■■□□□ 1.55
CNOT9-209ENST00000627282 MSH5O43196 834 aa24.72■■□□□ 1.55
CNOT9-209ENST00000627282 GOLGA2Q08379 1002 aa24.72■■□□□ 1.55
CNOT9-209ENST00000627282 AMIGO3Q86WK7 504 aa24.72■■□□□ 1.55
CNOT9-209ENST00000627282 CICQ96RK0 1608 aaPredicted RBP24.71■■□□□ 1.55
CNOT9-209ENST00000627282 COL24A1Q17RW2 1714 aa24.71■■□□□ 1.55
CNOT9-209ENST00000627282 PRAMEF22A3QJZ6 481 aa24.71■■□□□ 1.55
CNOT9-209ENST00000627282 KRT24Q2M2I5 525 aa24.71■■□□□ 1.55
CNOT9-209ENST00000627282 DNAJC10Q8IXB1 793 aa24.71■■□□□ 1.55
CNOT9-209ENST00000627282 FANCIQ9NVI1 1328 aa24.7■■□□□ 1.55
CNOT9-209ENST00000627282 COL5A3P25940 1745 aaPredicted RBP24.69■■□□□ 1.54
CNOT9-209ENST00000627282 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
CNOT9-209ENST00000627282 RCAN3Q9UKA8 241 aa24.69■■□□□ 1.54
CNOT9-209ENST00000627282 GNPATO15228 680 aa24.68■■□□□ 1.54
CNOT9-209ENST00000627282 GIGYF1O75420 1035 aaPredicted RBP24.68■■□□□ 1.54
CNOT9-209ENST00000627282 SNRPA1P09661 255 aaKnown RBP24.68■■□□□ 1.54
CNOT9-209ENST00000627282 SSFA2P28290 1259 aa24.68■■□□□ 1.54
CNOT9-209ENST00000627282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.68■■□□□ 1.54
CNOT9-209ENST00000627282 ARXQ96QS3 562 aa24.68■■□□□ 1.54
CNOT9-209ENST00000627282 PHF14O94880 888 aa24.67■■□□□ 1.54
CNOT9-209ENST00000627282 SLFN5Q08AF3 891 aa24.67■■□□□ 1.54
CNOT9-209ENST00000627282 RC3H1Q5TC82 1133 aaKnown RBP24.67■■□□□ 1.54
CNOT9-209ENST00000627282 MYH16Q9H6N6 1097 aa24.67■■□□□ 1.54
CNOT9-209ENST00000627282 CNTNAP4Q9C0A0 1308 aa24.67■■□□□ 1.54
CNOT9-209ENST00000627282 E9PSI1 815 aa24.66■■□□□ 1.54
CNOT9-209ENST00000627282 POLD1P28340 1107 aa24.66■■□□□ 1.54
CNOT9-209ENST00000627282 SMIM5Q71RC9 77 aa24.66■■□□□ 1.54
CNOT9-209ENST00000627282 USP16Q9Y5T5 823 aa24.66■■□□□ 1.54
CNOT9-209ENST00000627282 CYP19A1P11511 503 aaPredicted RBP24.65■■□□□ 1.54
CNOT9-209ENST00000627282 PPP4R2Q9NY27 417 aa24.65■■□□□ 1.54
CNOT9-209ENST00000627282 C8orf58Q8NAV2 365 aa24.64■■□□□ 1.54
CNOT9-209ENST00000627282 MYH14Q7Z406 1995 aaKnown RBP24.64■■□□□ 1.54
CNOT9-209ENST00000627282 TRMT2AQ8IZ69 625 aaKnown RBP24.64■■□□□ 1.53
CNOT9-209ENST00000627282 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.53
CNOT9-209ENST00000627282 CRKLP46109 303 aaKnown RBP24.63■■□□□ 1.53
CNOT9-209ENST00000627282 DUSP27Q5VZP5 1158 aa24.63■■□□□ 1.53
CNOT9-209ENST00000627282 MSL1Q68DK7 614 aa24.63■■□□□ 1.53
CNOT9-209ENST00000627282 FHDC1Q9C0D6 1143 aaPredicted RBP24.63■■□□□ 1.53
CNOT9-209ENST00000627282 TSPYL6Q8N831 410 aa24.62■■□□□ 1.53
CNOT9-209ENST00000627282 RTCBQ9Y3I0 505 aaKnown RBP24.62■■□□□ 1.53
CNOT9-209ENST00000627282 STARD3NLO95772 234 aa24.61■■□□□ 1.53
CNOT9-209ENST00000627282 INTS5Q6P9B9 1019 aaKnown RBP24.61■■□□□ 1.53
CNOT9-209ENST00000627282 LAMB4A4D0S4 1761 aa24.61■■□□□ 1.53
CNOT9-209ENST00000627282 ELL2O00472 640 aaPredicted RBP24.61■■□□□ 1.53
CNOT9-209ENST00000627282 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
CNOT9-209ENST00000627282 EXOSC9Q06265 439 aaKnown RBP24.61■■□□□ 1.53
CNOT9-209ENST00000627282 ADRA2BP18089 450 aa24.6■■□□□ 1.53
CNOT9-209ENST00000627282 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
CNOT9-209ENST00000627282 RPS6KA4O75676 772 aa24.59■■□□□ 1.53
CNOT9-209ENST00000627282 HOXB7P09629 217 aa24.59■■□□□ 1.53
CNOT9-209ENST00000627282 CCDC87Q9NVE4 849 aa24.59■■□□□ 1.53
CNOT9-209ENST00000627282 ZBTB1Q9Y2K1 713 aa24.59■■□□□ 1.53
CNOT9-209ENST00000627282 A1BGP04217 495 aa24.58■■□□□ 1.53
CNOT9-209ENST00000627282 TRAPPC3LQ5T215 181 aa24.58■■□□□ 1.53
CNOT9-209ENST00000627282 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
CNOT9-209ENST00000627282 PIP4K2AP48426 406 aaPredicted RBP24.56■■□□□ 1.52
CNOT9-209ENST00000627282 TWISTNBQ3B726 338 aaPredicted RBP24.56■■□□□ 1.52
CNOT9-209ENST00000627282 NBPF26B4DH59 902 aa24.55■■□□□ 1.52
CNOT9-209ENST00000627282 NBPF10Q6P3W6 841 aaKnown RBP24.55■■□□□ 1.52
CNOT9-209ENST00000627282 NBPF15Q8N660 670 aa24.55■■□□□ 1.52
CNOT9-209ENST00000627282 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
CNOT9-209ENST00000627282 ARHGEF1Q92888 912 aaKnown RBP24.55■■□□□ 1.52
CNOT9-209ENST00000627282 CANXP27824 592 aaKnown RBP24.54■■□□□ 1.52
CNOT9-209ENST00000627282 HDGFL1Q5TGJ6 251 aa24.54■■□□□ 1.52
CNOT9-209ENST00000627282 SOS1Q07889 1333 aaPredicted RBP24.54■■□□□ 1.52
CNOT9-209ENST00000627282 VAMP4O75379 141 aa24.53■■□□□ 1.52
CNOT9-209ENST00000627282 PDIA6Q15084 440 aa24.53■■□□□ 1.52
CNOT9-209ENST00000627282 C4AP0C0L4 1744 aa24.52■■□□□ 1.52
CNOT9-209ENST00000627282 RFC4P35249 363 aa24.52■■□□□ 1.52
CNOT9-209ENST00000627282 KLHL34Q8N239 644 aa24.52■■□□□ 1.52
CNOT9-209ENST00000627282 EIF5P55010 431 aaKnown RBP24.51■■□□□ 1.51
CNOT9-209ENST00000627282 ERBB4Q15303 1308 aa24.51■■□□□ 1.51
CNOT9-209ENST00000627282 PROSER3Q2NL68 480 aa24.5■■□□□ 1.51
CNOT9-209ENST00000627282 IL6STP40189 918 aaPredicted RBP24.5■■□□□ 1.51
CNOT9-209ENST00000627282 LRP10Q7Z4F1 713 aa24.5■■□□□ 1.51
CNOT9-209ENST00000627282 CHPF2Q9P2E5 772 aa24.5■■□□□ 1.51
CNOT9-209ENST00000627282 DCAF8L1A6NGE4 600 aa24.49■■□□□ 1.51
CNOT9-209ENST00000627282 ANXA1P04083 346 aa24.49■■□□□ 1.51
CNOT9-209ENST00000627282 GYS1P13807 737 aa24.48■■□□□ 1.51
CNOT9-209ENST00000627282 MYL6BP14649 208 aa24.48■■□□□ 1.51
CNOT9-209ENST00000627282 NLGN1Q8N2Q7 840 aa24.48■■□□□ 1.51
CNOT9-209ENST00000627282 COL15A1P39059 1388 aa24.47■■□□□ 1.51
CNOT9-209ENST00000627282 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
CNOT9-209ENST00000627282 CCDC30Q5VVM6 783 aa24.47■■□□□ 1.51
CNOT9-209ENST00000627282 DDX21Q9NR30 783 aaKnown RBP eCLIP24.47■■□□□ 1.51
CNOT9-209ENST00000627282 ZNF330Q9Y3S2 320 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms