RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
SOX2-OT-237ENST00000625581 SCN7AQ01118 1682 aa19.01■□□□□ 0.63
SOX2-OT-237ENST00000625581 SOS1Q07889 1333 aaPredicted RBP19■□□□□ 0.63
SOX2-OT-237ENST00000625581 SENP3-EIF4A1A0A087X0R7 540 aa19■□□□□ 0.63
SOX2-OT-237ENST00000625581 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
SOX2-OT-237ENST00000625581 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
SOX2-OT-237ENST00000625581 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
SOX2-OT-237ENST00000625581 BCORQ6W2J9 1755 aa18.99■□□□□ 0.63
SOX2-OT-237ENST00000625581 ADRA2BP18089 450 aa18.99■□□□□ 0.63
SOX2-OT-237ENST00000625581 TSPYL4Q9UJ04 414 aa18.99■□□□□ 0.63
SOX2-OT-237ENST00000625581 CHL1O00533 1208 aa18.98■□□□□ 0.63
SOX2-OT-237ENST00000625581 MSH5O43196 834 aa18.98■□□□□ 0.63
SOX2-OT-237ENST00000625581 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
SOX2-OT-237ENST00000625581 TEX13AQ9BXU3 409 aaPredicted RBP18.98■□□□□ 0.63
SOX2-OT-237ENST00000625581 COL15A1P39059 1388 aa18.97■□□□□ 0.63
SOX2-OT-237ENST00000625581 STARD3NLO95772 234 aa18.97■□□□□ 0.63
SOX2-OT-237ENST00000625581 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
SOX2-OT-237ENST00000625581 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
SOX2-OT-237ENST00000625581 ARHGEF1Q92888 912 aaKnown RBP18.97■□□□□ 0.63
SOX2-OT-237ENST00000625581 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
SOX2-OT-237ENST00000625581 GIGYF1O75420 1035 aaPredicted RBP18.96■□□□□ 0.63
SOX2-OT-237ENST00000625581 ZNF853P0CG23 659 aa18.96■□□□□ 0.63
SOX2-OT-237ENST00000625581 TRAPPC3LQ5T215 181 aa18.96■□□□□ 0.63
SOX2-OT-237ENST00000625581 MSL1Q68DK7 614 aa18.96■□□□□ 0.63
SOX2-OT-237ENST00000625581 MIER1Q8N108 512 aa18.96■□□□□ 0.63
SOX2-OT-237ENST00000625581 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
SOX2-OT-237ENST00000625581 USP42Q9H9J4 1324 aaKnown RBP18.95■□□□□ 0.62
SOX2-OT-237ENST00000625581 A1BGP04217 495 aa18.94■□□□□ 0.62
SOX2-OT-237ENST00000625581 EIF5P55010 431 aaKnown RBP18.94■□□□□ 0.62
SOX2-OT-237ENST00000625581 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
SOX2-OT-237ENST00000625581 IFT57Q9NWB7 429 aa18.94■□□□□ 0.62
SOX2-OT-237ENST00000625581 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-237ENST00000625581 MBIPQ9NS73 344 aa18.93■□□□□ 0.62
SOX2-OT-237ENST00000625581 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
SOX2-OT-237ENST00000625581 GYS1P13807 737 aa18.92■□□□□ 0.62
SOX2-OT-237ENST00000625581 RFC4P35249 363 aa18.92■□□□□ 0.62
SOX2-OT-237ENST00000625581 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
SOX2-OT-237ENST00000625581 CALD1Q05682 793 aaKnown RBP18.92■□□□□ 0.62
SOX2-OT-237ENST00000625581 KRT24Q2M2I5 525 aa18.92■□□□□ 0.62
SOX2-OT-237ENST00000625581 SRP68Q9UHB9 627 aaKnown RBP18.92■□□□□ 0.62
SOX2-OT-237ENST00000625581 NBPF26B4DH59 902 aa18.91■□□□□ 0.62
SOX2-OT-237ENST00000625581 IL6STP40189 918 aaPredicted RBP18.91■□□□□ 0.62
SOX2-OT-237ENST00000625581 NBPF10Q6P3W6 841 aaKnown RBP18.91■□□□□ 0.62
SOX2-OT-237ENST00000625581 NBPF15Q8N660 670 aa18.91■□□□□ 0.62
SOX2-OT-237ENST00000625581 KIF13BQ9NQT8 1826 aa18.9■□□□□ 0.62
SOX2-OT-237ENST00000625581 GNAI1P63096 354 aa18.9■□□□□ 0.62
SOX2-OT-237ENST00000625581 AFDNP55196 1824 aaKnown RBP18.89■□□□□ 0.61
SOX2-OT-237ENST00000625581 POLD1P28340 1107 aa18.89■□□□□ 0.61
SOX2-OT-237ENST00000625581 ARXQ96QS3 562 aa18.89■□□□□ 0.61
SOX2-OT-237ENST00000625581 IL16Q14005 1332 aa18.89■□□□□ 0.61
SOX2-OT-237ENST00000625581 NRXN2Q9P2S2 1712 aa18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 BCL2L12Q9HB09 334 aa18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 PPP1R1BQ9UD71 204 aaPredicted RBP18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 NARFQ9UHQ1 456 aa18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 SALL2Q9Y467 1007 aaPredicted RBP18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 ZNF521Q96K83 1311 aa18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 KIAA1551Q9HCM1 1747 aa18.88■□□□□ 0.61
SOX2-OT-237ENST00000625581 FKBP8Q14318 412 aa18.87■□□□□ 0.61
SOX2-OT-237ENST00000625581 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
SOX2-OT-237ENST00000625581 ERBB4Q15303 1308 aa18.86■□□□□ 0.61
SOX2-OT-237ENST00000625581 MMP10P09238 476 aa18.86■□□□□ 0.61
SOX2-OT-237ENST00000625581 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
SOX2-OT-237ENST00000625581 ZNF330Q9Y3S2 320 aaPredicted RBP18.86■□□□□ 0.61
SOX2-OT-237ENST00000625581 NUP98P52948 1817 aa18.86■□□□□ 0.61
SOX2-OT-237ENST00000625581 A0A087WZG4 1122 aa18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 ZPR1O75312 459 aa18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 HOXB7P09629 217 aa18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 LRP10Q7Z4F1 713 aa18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 TSR2Q969E8 191 aaKnown RBP18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 FHDC1Q9C0D6 1143 aaPredicted RBP18.85■□□□□ 0.61
SOX2-OT-237ENST00000625581 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
SOX2-OT-237ENST00000625581 PDIA6Q15084 440 aa18.84■□□□□ 0.61
SOX2-OT-237ENST00000625581 WDR63Q8IWG1 891 aa18.84■□□□□ 0.61
SOX2-OT-237ENST00000625581 TBC1D2BQ9UPU7 963 aa18.84■□□□□ 0.61
SOX2-OT-237ENST00000625581 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
SOX2-OT-237ENST00000625581 DDR1Q08345 913 aa18.83■□□□□ 0.6
SOX2-OT-237ENST00000625581 PROSER3Q2NL68 480 aa18.83■□□□□ 0.6
SOX2-OT-237ENST00000625581 DUSP27Q5VZP5 1158 aa18.83■□□□□ 0.6
SOX2-OT-237ENST00000625581 DZIP3Q86Y13 1208 aaKnown RBP18.83■□□□□ 0.6
SOX2-OT-237ENST00000625581 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
SOX2-OT-237ENST00000625581 C10orf71Q711Q0 1435 aa18.83■□□□□ 0.6
SOX2-OT-237ENST00000625581 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SOX2-OT-237ENST00000625581 C8orf58Q8NAV2 365 aa18.82■□□□□ 0.6
SOX2-OT-237ENST00000625581 ANKRD36CQ5JPF3 1778 aa18.82■□□□□ 0.6
SOX2-OT-237ENST00000625581 TM4SF1P30408 202 aa18.81■□□□□ 0.6
SOX2-OT-237ENST00000625581 NECTIN2Q92692 538 aa18.81■□□□□ 0.6
SOX2-OT-237ENST00000625581 SYT17Q9BSW7 474 aa18.81■□□□□ 0.6
SOX2-OT-237ENST00000625581 POLRMTO00411 1230 aaKnown RBP18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 ANXA1P04083 346 aa18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 MYL6BP14649 208 aa18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 NFIXQ14938 502 aa18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 HDGFL1Q5TGJ6 251 aa18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 TSPYL6Q8N831 410 aa18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 N4BP2Q86UW6 1770 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 ANKRD31Q8N7Z5 1873 aa18.8■□□□□ 0.6
SOX2-OT-237ENST00000625581 ARFGEF2Q9Y6D5 1785 aa18.79■□□□□ 0.6
SOX2-OT-237ENST00000625581 TTLL7Q6ZT98 887 aa18.79■□□□□ 0.6
SOX2-OT-237ENST00000625581 CHPF2Q9P2E5 772 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms