RNA–Protein interactions for RNA: ENST00000625300.1

MECP2-214, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 350 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-214ENST00000625300 SCN7AQ01118 1682 aa12□□□□□ -0.49
MECP2-214ENST00000625300 BCORQ6W2J9 1755 aa12□□□□□ -0.49
MECP2-214ENST00000625300 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
MECP2-214ENST00000625300 CHL1O00533 1208 aa11.99□□□□□ -0.49
MECP2-214ENST00000625300 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
MECP2-214ENST00000625300 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
MECP2-214ENST00000625300 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
MECP2-214ENST00000625300 COL24A1Q17RW2 1714 aa11.98□□□□□ -0.49
MECP2-214ENST00000625300 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
MECP2-214ENST00000625300 KCNQ3O43525 872 aa11.98□□□□□ -0.49
MECP2-214ENST00000625300 PHF14O94880 888 aa11.98□□□□□ -0.49
MECP2-214ENST00000625300 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
MECP2-214ENST00000625300 ADRA2BP18089 450 aa11.98□□□□□ -0.49
MECP2-214ENST00000625300 EIF4A1P60842 406 aaKnown RBP11.98□□□□□ -0.49
MECP2-214ENST00000625300 COL15A1P39059 1388 aa11.97□□□□□ -0.49
MECP2-214ENST00000625300 RPS6KA4O75676 772 aa11.97□□□□□ -0.49
MECP2-214ENST00000625300 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
MECP2-214ENST00000625300 MBIPQ9NS73 344 aa11.97□□□□□ -0.49
MECP2-214ENST00000625300 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.49
MECP2-214ENST00000625300 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
MECP2-214ENST00000625300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
MECP2-214ENST00000625300 HOXB7P09629 217 aa11.96□□□□□ -0.49
MECP2-214ENST00000625300 ZNF853P0CG23 659 aa11.96□□□□□ -0.49
MECP2-214ENST00000625300 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
MECP2-214ENST00000625300 ZNF330Q9Y3S2 320 aaPredicted RBP11.96□□□□□ -0.49
MECP2-214ENST00000625300 A0A087WZG4 1122 aa11.95□□□□□ -0.5
MECP2-214ENST00000625300 GIGYF1O75420 1035 aaPredicted RBP11.95□□□□□ -0.5
MECP2-214ENST00000625300 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
MECP2-214ENST00000625300 RFC4P35249 363 aa11.95□□□□□ -0.5
MECP2-214ENST00000625300 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
MECP2-214ENST00000625300 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
MECP2-214ENST00000625300 ZBTB1Q9Y2K1 713 aa11.95□□□□□ -0.5
MECP2-214ENST00000625300 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
MECP2-214ENST00000625300 IL6STP40189 918 aaPredicted RBP11.94□□□□□ -0.5
MECP2-214ENST00000625300 INTS5Q6P9B9 1019 aaKnown RBP11.94□□□□□ -0.5
MECP2-214ENST00000625300 TSR2Q969E8 191 aaKnown RBP11.94□□□□□ -0.5
MECP2-214ENST00000625300 MTFR1LQ9H019 292 aa11.94□□□□□ -0.5
MECP2-214ENST00000625300 SPON1Q9HCB6 807 aa11.94□□□□□ -0.5
MECP2-214ENST00000625300 USP16Q9Y5T5 823 aa11.94□□□□□ -0.5
MECP2-214ENST00000625300 NUP98P52948 1817 aa11.94□□□□□ -0.5
MECP2-214ENST00000625300 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
MECP2-214ENST00000625300 E9PSI1 815 aa11.93□□□□□ -0.5
MECP2-214ENST00000625300 ZPR1O75312 459 aa11.93□□□□□ -0.5
MECP2-214ENST00000625300 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
MECP2-214ENST00000625300 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
MECP2-214ENST00000625300 ZNF521Q96K83 1311 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 PRAMEF22A3QJZ6 481 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 A1BGP04217 495 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
MECP2-214ENST00000625300 POLD1P28340 1107 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 ARFGEF2Q9Y6D5 1785 aa11.92□□□□□ -0.5
MECP2-214ENST00000625300 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
MECP2-214ENST00000625300 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
MECP2-214ENST00000625300 ARXQ96QS3 562 aa11.91□□□□□ -0.5
MECP2-214ENST00000625300 STK31Q9BXU1 1019 aa11.91□□□□□ -0.5
MECP2-214ENST00000625300 MYL6BP14649 208 aa11.9□□□□□ -0.5
MECP2-214ENST00000625300 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
MECP2-214ENST00000625300 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
MECP2-214ENST00000625300 TWISTNBQ3B726 338 aaPredicted RBP11.9□□□□□ -0.5
MECP2-214ENST00000625300 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
MECP2-214ENST00000625300 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
MECP2-214ENST00000625300 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
MECP2-214ENST00000625300 NLGN1Q8N2Q7 840 aa11.9□□□□□ -0.5
MECP2-214ENST00000625300 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
MECP2-214ENST00000625300 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
MECP2-214ENST00000625300 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
MECP2-214ENST00000625300 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
MECP2-214ENST00000625300 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
MECP2-214ENST00000625300 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
MECP2-214ENST00000625300 PIP4K2AP48426 406 aaPredicted RBP11.89□□□□□ -0.51
MECP2-214ENST00000625300 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
MECP2-214ENST00000625300 NECTIN2Q92692 538 aa11.89□□□□□ -0.51
MECP2-214ENST00000625300 PDGFDQ9GZP0 370 aaPredicted RBP11.89□□□□□ -0.51
MECP2-214ENST00000625300 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
MECP2-214ENST00000625300 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
MECP2-214ENST00000625300 EXOSC9Q06265 439 aaKnown RBP11.88□□□□□ -0.51
MECP2-214ENST00000625300 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
MECP2-214ENST00000625300 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
MECP2-214ENST00000625300 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
MECP2-214ENST00000625300 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
MECP2-214ENST00000625300 CHPF2Q9P2E5 772 aa11.88□□□□□ -0.51
MECP2-214ENST00000625300 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
MECP2-214ENST00000625300 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
MECP2-214ENST00000625300 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 RGL2O15211 777 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 GYS1P13807 737 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 SLFN5Q08AF3 891 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
MECP2-214ENST00000625300 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
MECP2-214ENST00000625300 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
MECP2-214ENST00000625300 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
MECP2-214ENST00000625300 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
MECP2-214ENST00000625300 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
MECP2-214ENST00000625300 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
MECP2-214ENST00000625300 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
MECP2-214ENST00000625300 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms