RNA–Protein interactions for RNA: ENST00000622838.4

SEM1-222, Transcript of SEM1, 26S proteasome complex subunit, human

TSL 5

Gene SEM1, Length 885 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEM1-222	ENST00000622838	PDE3B	Q13370	1112 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	GRIPAP1	Q4V328	841 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	SPRYD7	Q5W111	196 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	MCF2L2	Q86YR7	1114 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	PNMA1	Q8ND90	353 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	PARP2	Q9UGN5	583 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	DACH1	Q9UI36	760 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	INPP5F	Q9Y2H2	1132 aa		6.28	□□□□□ -1.4
SEM1-222	ENST00000622838	ATP5J2-PTCD1	G3V325	749 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	WDHD1	O75717	1129 aa	Predicted RBP	6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	AMPD3	Q01432	767 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	NCOA4	Q13772	614 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	OCLN	Q16625	522 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	SLFNL1	Q499Z3	407 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	ODR4	Q5SWX8	454 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	SWT1	Q5T5J6	900 aa	Known RBP	6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	TMC7	Q7Z402	723 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	TMC4	Q7Z404	712 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	ZNF598	Q86UK7	904 aa	Known RBP	6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	TYW1	Q9NV66	732 aa	Known RBP	6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	BSDC1	Q9NW68	430 aa	Predicted RBP	6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	VTI1B	Q9UEU0	232 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	COMMD10	Q9Y6G5	202 aa		6.27	□□□□□ -1.41
SEM1-222	ENST00000622838	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	SORBS3	O60504	671 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	ZPR1	O75312	459 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	FMNL1	O95466	1100 aa	Predicted RBP	6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	ITGAE	P38570	1179 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	EVA1C	P58658	441 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	NR1H3	Q13133	447 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	OS9	Q13438	667 aa	Predicted RBP	6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	SULF1	Q8IWU6	871 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	TTC13	Q8NBP0	860 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	SENP7	Q9BQF6	1050 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	TTF2	Q9UNY4	1162 aa	Known RBP	6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	PRKAB1	Q9Y478	270 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	PCDHB3	Q9Y5E6	796 aa		6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	6.26	□□□□□ -1.41
SEM1-222	ENST00000622838	CCDC189	A1A4V9	331 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	C3orf80	F5H4A9	247 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838		K7ELQ4	463 aa	Predicted RBP	6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	TNFRSF10A	O00220	468 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	GDF9	O60383	454 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	PRPF40A	O75400	957 aa	Known RBP	6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	KIF4A	O95239	1232 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	MTMR3	Q13615	1198 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	ENOX2	Q16206	610 aa	Known RBP	6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	PLEKHG4	Q58EX7	1191 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	C8orf48	Q96LL4	319 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	DUSP9	Q99956	384 aa	Known RBP	6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	RBCK1	Q9BYM8	510 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	RNF19A	Q9NV58	838 aa		6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.25	□□□□□ -1.41
SEM1-222	ENST00000622838	C11orf95	C9JLR9	678 aa	Predicted RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	EXOC5	O00471	708 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	TREH	O43280	583 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	LDHB	P07195	334 aa	Known RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	DAB2	P98082	770 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	SF3B2	Q13435	895 aa	Known RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	SERINC3	Q13530	473 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	UBE4A	Q14139	1066 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	NR6A1	Q15406	480 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	PRPF38A	Q8NAV1	312 aa	Known RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	ZNF594	Q96JF6	807 aa	Predicted RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	SCYL1	Q96KG9	808 aa		6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	QTRT2	Q9H974	415 aa	Known RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	GMPR2	Q9P2T1	348 aa	Known RBP	6.24	□□□□□ -1.41
SEM1-222	ENST00000622838	DDX11L8	A8MPP1	907 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	RNF223	E7ERA6	249 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	CCER2	I3L3R5	266 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	PPP1R12A	O14974	1030 aa	Predicted RBP	6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	GIGYF1	O75420	1035 aa	Predicted RBP	6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	FDX1	P10109	184 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	BDNF	P23560	247 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	FKBP4	Q02790	459 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	PSMD2	Q13200	908 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	RNPC3	Q96LT9	517 aa	Known RBP	6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	PRIMPOL	Q96LW4	560 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	FRMD6	Q96NE9	622 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	SEPT3	Q9UH03	358 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	WWC3	Q9ULE0	1092 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	PCDHGC3	Q9UN70	934 aa		6.23	□□□□□ -1.41
SEM1-222	ENST00000622838	CFAP99	D6REC4	459 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	VIL1	P09327	827 aa	Known RBP	6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	FBXO45	P0C2W1	286 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	GYS2	P54840	703 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	ZNF394	Q53GI3	561 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	ZNF697	Q5TEC3	545 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	OGFOD1	Q8N543	542 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	IER2	Q9BTL4	223 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	TCEAL9	Q9UHQ7	104 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	DDX41	Q9UJV9	622 aa	Known RBP	6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	PCDHGB7	Q9Y5F8	929 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	EMILIN1	Q9Y6C2	1016 aa		6.22	□□□□□ -1.41
SEM1-222	ENST00000622838	RCCD1	A6NED2	376 aa		6.21	□□□□□ -1.42
SEM1-222	ENST00000622838	RACK1	P63244	317 aa	Known RBP	6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms