RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
PCDHGC3-208ENST00000622836 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
PCDHGC3-208ENST00000622836 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
PCDHGC3-208ENST00000622836 FHDC1Q9C0D6 1143 aaPredicted RBP18.35■□□□□ 0.53
PCDHGC3-208ENST00000622836 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
PCDHGC3-208ENST00000622836 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
PCDHGC3-208ENST00000622836 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
PCDHGC3-208ENST00000622836 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
PCDHGC3-208ENST00000622836 ZNF330Q9Y3S2 320 aaPredicted RBP18.33■□□□□ 0.52
PCDHGC3-208ENST00000622836 ZPR1O75312 459 aa18.32■□□□□ 0.52
PCDHGC3-208ENST00000622836 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-208ENST00000622836 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
PCDHGC3-208ENST00000622836 APAF1O14727 1248 aa18.31■□□□□ 0.52
PCDHGC3-208ENST00000622836 NLGN1Q8N2Q7 840 aa18.31■□□□□ 0.52
PCDHGC3-208ENST00000622836 SYT17Q9BSW7 474 aa18.31■□□□□ 0.52
PCDHGC3-208ENST00000622836 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
PCDHGC3-208ENST00000622836 COL15A1P39059 1388 aa18.3■□□□□ 0.52
PCDHGC3-208ENST00000622836 COL24A1Q17RW2 1714 aa18.3■□□□□ 0.52
PCDHGC3-208ENST00000622836 USP42Q9H9J4 1324 aaKnown RBP18.29■□□□□ 0.52
PCDHGC3-208ENST00000622836 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
PCDHGC3-208ENST00000622836 MMP10P09238 476 aa18.29■□□□□ 0.52
PCDHGC3-208ENST00000622836 GYS1P13807 737 aa18.29■□□□□ 0.52
PCDHGC3-208ENST00000622836 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
PCDHGC3-208ENST00000622836 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
PCDHGC3-208ENST00000622836 A0A087WZG4 1122 aa18.28■□□□□ 0.52
PCDHGC3-208ENST00000622836 A1BGP04217 495 aa18.28■□□□□ 0.52
PCDHGC3-208ENST00000622836 TRIM35Q9UPQ4 493 aa18.28■□□□□ 0.52
PCDHGC3-208ENST00000622836 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
PCDHGC3-208ENST00000622836 C4AP0C0L4 1744 aa18.28■□□□□ 0.52
PCDHGC3-208ENST00000622836 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
PCDHGC3-208ENST00000622836 USPL1Q5W0Q7 1092 aa18.27■□□□□ 0.52
PCDHGC3-208ENST00000622836 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
PCDHGC3-208ENST00000622836 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
PCDHGC3-208ENST00000622836 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
PCDHGC3-208ENST00000622836 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
PCDHGC3-208ENST00000622836 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
PCDHGC3-208ENST00000622836 PIP4K2AP48426 406 aaPredicted RBP18.25■□□□□ 0.51
PCDHGC3-208ENST00000622836 FKBP8Q14318 412 aa18.25■□□□□ 0.51
PCDHGC3-208ENST00000622836 PARP3Q9Y6F1 533 aa18.25■□□□□ 0.51
PCDHGC3-208ENST00000622836 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
PCDHGC3-208ENST00000622836 GIGYF1O75420 1035 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC3-208ENST00000622836 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
PCDHGC3-208ENST00000622836 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
PCDHGC3-208ENST00000622836 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
PCDHGC3-208ENST00000622836 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
PCDHGC3-208ENST00000622836 CD2APQ9Y5K6 639 aa18.23■□□□□ 0.51
PCDHGC3-208ENST00000622836 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
PCDHGC3-208ENST00000622836 CHL1O00533 1208 aa18.21■□□□□ 0.51
PCDHGC3-208ENST00000622836 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
PCDHGC3-208ENST00000622836 LAMB4A4D0S4 1761 aa18.2■□□□□ 0.5
PCDHGC3-208ENST00000622836 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
PCDHGC3-208ENST00000622836 BICDL1Q6ZP65 573 aa18.2■□□□□ 0.5
PCDHGC3-208ENST00000622836 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
PCDHGC3-208ENST00000622836 NBPF26B4DH59 902 aa18.19■□□□□ 0.5
PCDHGC3-208ENST00000622836 GPR162Q16538 588 aa18.19■□□□□ 0.5
PCDHGC3-208ENST00000622836 NBPF10Q6P3W6 841 aaKnown RBP18.19■□□□□ 0.5
PCDHGC3-208ENST00000622836 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
PCDHGC3-208ENST00000622836 NBPF15Q8N660 670 aa18.19■□□□□ 0.5
PCDHGC3-208ENST00000622836 MYL6BP14649 208 aa18.18■□□□□ 0.5
PCDHGC3-208ENST00000622836 GNAI1P63096 354 aa18.18■□□□□ 0.5
PCDHGC3-208ENST00000622836 DDR1Q08345 913 aa18.18■□□□□ 0.5
PCDHGC3-208ENST00000622836 NFIXQ14938 502 aa18.18■□□□□ 0.5
PCDHGC3-208ENST00000622836 IFT57Q9NWB7 429 aa18.18■□□□□ 0.5
PCDHGC3-208ENST00000622836 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
PCDHGC3-208ENST00000622836 TM4SF1P30408 202 aa18.17■□□□□ 0.5
PCDHGC3-208ENST00000622836 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
PCDHGC3-208ENST00000622836 MBIPQ9NS73 344 aa18.17■□□□□ 0.5
PCDHGC3-208ENST00000622836 POLRMTO00411 1230 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-208ENST00000622836 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
PCDHGC3-208ENST00000622836 NECTIN2Q92692 538 aa18.16■□□□□ 0.5
PCDHGC3-208ENST00000622836 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
PCDHGC3-208ENST00000622836 NPHP1O15259 732 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 TBC1D9BQ66K14 1250 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 ERBB4Q15303 1308 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 C10orf71Q711Q0 1435 aa18.15■□□□□ 0.5
PCDHGC3-208ENST00000622836 SERPINB2P05120 415 aa18.14■□□□□ 0.49
PCDHGC3-208ENST00000622836 KIF6Q6ZMV9 814 aa18.14■□□□□ 0.49
PCDHGC3-208ENST00000622836 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
PCDHGC3-208ENST00000622836 ZNF853P0CG23 659 aa18.13■□□□□ 0.49
PCDHGC3-208ENST00000622836 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
PCDHGC3-208ENST00000622836 SETDB2Q96T68 719 aa18.13■□□□□ 0.49
PCDHGC3-208ENST00000622836 TGFB2P61812 414 aa18.12■□□□□ 0.49
PCDHGC3-208ENST00000622836 HDGFL1Q5TGJ6 251 aa18.12■□□□□ 0.49
PCDHGC3-208ENST00000622836 DUSP27Q5VZP5 1158 aa18.12■□□□□ 0.49
PCDHGC3-208ENST00000622836 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
PCDHGC3-208ENST00000622836 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
PCDHGC3-208ENST00000622836 HOXB7P09629 217 aa18.11■□□□□ 0.49
PCDHGC3-208ENST00000622836 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
PCDHGC3-208ENST00000622836 CARMIL3Q8ND23 1372 aa18.11■□□□□ 0.49
PCDHGC3-208ENST00000622836 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
PCDHGC3-208ENST00000622836 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
PCDHGC3-208ENST00000622836 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
PCDHGC3-208ENST00000622836 ELL2O00472 640 aaPredicted RBP18.1■□□□□ 0.49
PCDHGC3-208ENST00000622836 ANXA1P04083 346 aa18.1■□□□□ 0.49
PCDHGC3-208ENST00000622836 MAP3K15Q6ZN16 1313 aa18.09■□□□□ 0.49
PCDHGC3-208ENST00000622836 DPEP1P16444 411 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms