RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 ZNF853P0CG23 659 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
MUC1-229ENST00000620770 DNAJC10Q8IXB1 793 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
MUC1-229ENST00000620770 TJP1Q07157 1748 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 CHD4Q14839 1912 aa17.54■□□□□ 0.4
MUC1-229ENST00000620770 PRAMEF22A3QJZ6 481 aa17.53■□□□□ 0.4
MUC1-229ENST00000620770 YY1P25490 414 aa17.53■□□□□ 0.4
MUC1-229ENST00000620770 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
MUC1-229ENST00000620770 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
MUC1-229ENST00000620770 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
MUC1-229ENST00000620770 MSH5O43196 834 aa17.52■□□□□ 0.4
MUC1-229ENST00000620770 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
MUC1-229ENST00000620770 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
MUC1-229ENST00000620770 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
MUC1-229ENST00000620770 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
MUC1-229ENST00000620770 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
MUC1-229ENST00000620770 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
MUC1-229ENST00000620770 AK7Q96M32 723 aa17.5■□□□□ 0.39
MUC1-229ENST00000620770 ZNF831Q5JPB2 1677 aa17.49■□□□□ 0.39
MUC1-229ENST00000620770 E9PSI1 815 aa17.49■□□□□ 0.39
MUC1-229ENST00000620770 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
MUC1-229ENST00000620770 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
MUC1-229ENST00000620770 FLAD1Q8NFF5 587 aa17.49■□□□□ 0.39
MUC1-229ENST00000620770 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
MUC1-229ENST00000620770 COL5A3P25940 1745 aaPredicted RBP17.49■□□□□ 0.39
MUC1-229ENST00000620770 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
MUC1-229ENST00000620770 STARD3NLO95772 234 aa17.48■□□□□ 0.39
MUC1-229ENST00000620770 CRKLP46109 303 aaKnown RBP17.48■□□□□ 0.39
MUC1-229ENST00000620770 COL23A1Q86Y22 540 aaPredicted RBP17.48■□□□□ 0.39
MUC1-229ENST00000620770 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
MUC1-229ENST00000620770 GNPATO15228 680 aa17.47■□□□□ 0.39
MUC1-229ENST00000620770 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
MUC1-229ENST00000620770 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
MUC1-229ENST00000620770 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
MUC1-229ENST00000620770 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
MUC1-229ENST00000620770 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
MUC1-229ENST00000620770 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
MUC1-229ENST00000620770 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
MUC1-229ENST00000620770 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
MUC1-229ENST00000620770 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
MUC1-229ENST00000620770 PHF14O94880 888 aa17.46■□□□□ 0.39
MUC1-229ENST00000620770 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
MUC1-229ENST00000620770 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
MUC1-229ENST00000620770 TSPYL6Q8N831 410 aa17.46■□□□□ 0.39
MUC1-229ENST00000620770 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
MUC1-229ENST00000620770 A1BGP04217 495 aa17.45■□□□□ 0.38
MUC1-229ENST00000620770 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
MUC1-229ENST00000620770 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
MUC1-229ENST00000620770 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
MUC1-229ENST00000620770 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
MUC1-229ENST00000620770 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
MUC1-229ENST00000620770 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
MUC1-229ENST00000620770 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
MUC1-229ENST00000620770 AMIGO3Q86WK7 504 aa17.43■□□□□ 0.38
MUC1-229ENST00000620770 SSFA2P28290 1259 aa17.42■□□□□ 0.38
MUC1-229ENST00000620770 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
MUC1-229ENST00000620770 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
MUC1-229ENST00000620770 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
MUC1-229ENST00000620770 HOXB7P09629 217 aa17.41■□□□□ 0.38
MUC1-229ENST00000620770 MYL6BP14649 208 aa17.41■□□□□ 0.38
MUC1-229ENST00000620770 GPR162Q16538 588 aa17.41■□□□□ 0.38
MUC1-229ENST00000620770 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
MUC1-229ENST00000620770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.4■□□□□ 0.38
MUC1-229ENST00000620770 RPS6KA4O75676 772 aa17.4■□□□□ 0.38
MUC1-229ENST00000620770 ANXA1P04083 346 aa17.4■□□□□ 0.38
MUC1-229ENST00000620770 SOS1Q07889 1333 aaPredicted RBP17.4■□□□□ 0.38
MUC1-229ENST00000620770 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
MUC1-229ENST00000620770 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
MUC1-229ENST00000620770 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
MUC1-229ENST00000620770 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
MUC1-229ENST00000620770 TRMT2AQ8IZ69 625 aaKnown RBP17.39■□□□□ 0.37
MUC1-229ENST00000620770 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
MUC1-229ENST00000620770 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
MUC1-229ENST00000620770 NLGN2Q8NFZ4 835 aa17.39■□□□□ 0.37
MUC1-229ENST00000620770 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
MUC1-229ENST00000620770 COL15A1P39059 1388 aa17.39■□□□□ 0.37
MUC1-229ENST00000620770 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
MUC1-229ENST00000620770 UTRNP46939 3433 aa17.38■□□□□ 0.37
MUC1-229ENST00000620770 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
MUC1-229ENST00000620770 ERBB4Q15303 1308 aa17.37■□□□□ 0.37
MUC1-229ENST00000620770 VAMP4O75379 141 aa17.36■□□□□ 0.37
MUC1-229ENST00000620770 RFC4P35249 363 aa17.36■□□□□ 0.37
MUC1-229ENST00000620770 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
MUC1-229ENST00000620770 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
MUC1-229ENST00000620770 ARHGEF1Q92888 912 aaKnown RBP17.36■□□□□ 0.37
MUC1-229ENST00000620770 STK31Q9BXU1 1019 aa17.36■□□□□ 0.37
MUC1-229ENST00000620770 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
MUC1-229ENST00000620770 PDIA6Q15084 440 aa17.35■□□□□ 0.37
MUC1-229ENST00000620770 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
MUC1-229ENST00000620770 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
MUC1-229ENST00000620770 SRP68Q9UHB9 627 aaKnown RBP17.35■□□□□ 0.37
MUC1-229ENST00000620770 CD2APQ9Y5K6 639 aa17.35■□□□□ 0.37
MUC1-229ENST00000620770 ADRA2BP18089 450 aa17.34■□□□□ 0.37
MUC1-229ENST00000620770 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
MUC1-229ENST00000620770 TBC1D2BQ9UPU7 963 aa17.34■□□□□ 0.37
MUC1-229ENST00000620770 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
MUC1-229ENST00000620770 KIF13BQ9NQT8 1826 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms