RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TRMT2AQ8IZ69 625 aaKnown RBP17.71■□□□□ 0.43
NEK3-210ENST00000620675 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
NEK3-210ENST00000620675 E9PSI1 815 aa17.71■□□□□ 0.43
NEK3-210ENST00000620675 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
NEK3-210ENST00000620675 ZNF827Q17R98 1081 aa17.7■□□□□ 0.42
NEK3-210ENST00000620675 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
NEK3-210ENST00000620675 CYP19A1P11511 503 aaPredicted RBP17.7■□□□□ 0.42
NEK3-210ENST00000620675 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
NEK3-210ENST00000620675 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
NEK3-210ENST00000620675 A1BGP04217 495 aa17.68■□□□□ 0.42
NEK3-210ENST00000620675 EIF2S2P20042 333 aaKnown RBP17.68■□□□□ 0.42
NEK3-210ENST00000620675 CRKLP46109 303 aaKnown RBP17.68■□□□□ 0.42
NEK3-210ENST00000620675 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
NEK3-210ENST00000620675 INTS5Q6P9B9 1019 aaKnown RBP17.67■□□□□ 0.42
NEK3-210ENST00000620675 ZBTB1Q9Y2K1 713 aa17.67■□□□□ 0.42
NEK3-210ENST00000620675 ANXA1P04083 346 aa17.67■□□□□ 0.42
NEK3-210ENST00000620675 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
NEK3-210ENST00000620675 TWISTNBQ3B726 338 aaPredicted RBP17.66■□□□□ 0.42
NEK3-210ENST00000620675 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
NEK3-210ENST00000620675 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
NEK3-210ENST00000620675 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
NEK3-210ENST00000620675 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
NEK3-210ENST00000620675 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
NEK3-210ENST00000620675 VAMP4O75379 141 aa17.65■□□□□ 0.42
NEK3-210ENST00000620675 C4AP0C0L4 1744 aa17.64■□□□□ 0.42
NEK3-210ENST00000620675 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.41
NEK3-210ENST00000620675 PDGFDQ9GZP0 370 aaPredicted RBP17.64■□□□□ 0.41
NEK3-210ENST00000620675 GNPATO15228 680 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 STARD3NLO95772 234 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 CCDC87Q9NVE4 849 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 CACNA1FO60840 1977 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 CNTNAP4Q9C0A0 1308 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 PDIA6Q15084 440 aa17.63■□□□□ 0.41
NEK3-210ENST00000620675 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
NEK3-210ENST00000620675 CHPF2Q9P2E5 772 aa17.62■□□□□ 0.41
NEK3-210ENST00000620675 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
NEK3-210ENST00000620675 PHF14O94880 888 aa17.62■□□□□ 0.41
NEK3-210ENST00000620675 MYL6BP14649 208 aa17.62■□□□□ 0.41
NEK3-210ENST00000620675 SLC15A2Q16348 729 aa17.62■□□□□ 0.41
NEK3-210ENST00000620675 AK7Q96M32 723 aa17.62■□□□□ 0.41
NEK3-210ENST00000620675 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
NEK3-210ENST00000620675 HOXB7P09629 217 aa17.6■□□□□ 0.41
NEK3-210ENST00000620675 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
NEK3-210ENST00000620675 LRP10Q7Z4F1 713 aa17.6■□□□□ 0.41
NEK3-210ENST00000620675 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
NEK3-210ENST00000620675 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
NEK3-210ENST00000620675 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
NEK3-210ENST00000620675 R3HDM1Q15032 1099 aaKnown RBP17.59■□□□□ 0.41
NEK3-210ENST00000620675 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
NEK3-210ENST00000620675 SOS1Q07889 1333 aaPredicted RBP17.59■□□□□ 0.41
NEK3-210ENST00000620675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
NEK3-210ENST00000620675 RPS6KA4O75676 772 aa17.59■□□□□ 0.41
NEK3-210ENST00000620675 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
NEK3-210ENST00000620675 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
NEK3-210ENST00000620675 G2E3Q7L622 706 aa17.57■□□□□ 0.4
NEK3-210ENST00000620675 COL23A1Q86Y22 540 aaPredicted RBP17.57■□□□□ 0.4
NEK3-210ENST00000620675 PHAXQ9H814 394 aaKnown RBP17.57■□□□□ 0.4
NEK3-210ENST00000620675 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
NEK3-210ENST00000620675 CASZ1Q86V15 1759 aa17.57■□□□□ 0.4
NEK3-210ENST00000620675 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
NEK3-210ENST00000620675 NUP98P52948 1817 aa17.57■□□□□ 0.4
NEK3-210ENST00000620675 COL15A1P39059 1388 aa17.57■□□□□ 0.4
NEK3-210ENST00000620675 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
NEK3-210ENST00000620675 SSH1Q8WYL5 1049 aa17.56■□□□□ 0.4
NEK3-210ENST00000620675 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
NEK3-210ENST00000620675 SRP68Q9UHB9 627 aaKnown RBP17.56■□□□□ 0.4
NEK3-210ENST00000620675 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
NEK3-210ENST00000620675 CCDC30Q5VVM6 783 aa17.56■□□□□ 0.4
NEK3-210ENST00000620675 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
NEK3-210ENST00000620675 BCORQ6W2J9 1755 aa17.55■□□□□ 0.4
NEK3-210ENST00000620675 AIMP1Q12904 312 aaKnown RBP17.55■□□□□ 0.4
NEK3-210ENST00000620675 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
NEK3-210ENST00000620675 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
NEK3-210ENST00000620675 SSFA2P28290 1259 aa17.54■□□□□ 0.4
NEK3-210ENST00000620675 XAGE3Q8WTP9 111 aa17.54■□□□□ 0.4
NEK3-210ENST00000620675 ARXQ96QS3 562 aa17.54■□□□□ 0.4
NEK3-210ENST00000620675 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
NEK3-210ENST00000620675 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
NEK3-210ENST00000620675 COPS6Q7L5N1 327 aa17.53■□□□□ 0.4
NEK3-210ENST00000620675 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
NEK3-210ENST00000620675 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
NEK3-210ENST00000620675 MSH5O43196 834 aa17.52■□□□□ 0.4
NEK3-210ENST00000620675 BCAR3O75815 825 aa17.52■□□□□ 0.4
NEK3-210ENST00000620675 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
NEK3-210ENST00000620675 MRPL50Q8N5N7 158 aaKnown RBP17.52■□□□□ 0.39
NEK3-210ENST00000620675 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.39
NEK3-210ENST00000620675 DZIP3Q86Y13 1208 aaKnown RBP17.51■□□□□ 0.39
NEK3-210ENST00000620675 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
NEK3-210ENST00000620675 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
NEK3-210ENST00000620675 HLFQ16534 295 aa17.51■□□□□ 0.39
NEK3-210ENST00000620675 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
NEK3-210ENST00000620675 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
NEK3-210ENST00000620675 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
NEK3-210ENST00000620675 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
NEK3-210ENST00000620675 RFC4P35249 363 aa17.5■□□□□ 0.39
NEK3-210ENST00000620675 MSL1Q68DK7 614 aa17.5■□□□□ 0.39
NEK3-210ENST00000620675 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
NEK3-210ENST00000620675 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
NEK3-210ENST00000620675 ADRA2BP18089 450 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms