RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 SLC16A10Q8TF71 515 aa21.38■■□□□ 1.01
AP3S2-216ENST00000617003 CCDC87Q9NVE4 849 aa21.38■■□□□ 1.01
AP3S2-216ENST00000617003 BABAM1Q9NWV8 329 aa21.38■■□□□ 1.01
AP3S2-216ENST00000617003 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
AP3S2-216ENST00000617003 SNRPA1P09661 255 aaKnown RBP21.37■■□□□ 1.01
AP3S2-216ENST00000617003 TRAPPC3LQ5T215 181 aa21.37■■□□□ 1.01
AP3S2-216ENST00000617003 MTFR1LQ9H019 292 aa21.37■■□□□ 1.01
AP3S2-216ENST00000617003 SALL2Q9Y467 1007 aaPredicted RBP21.37■■□□□ 1.01
AP3S2-216ENST00000617003 CHL1O00533 1208 aa21.36■■□□□ 1.01
AP3S2-216ENST00000617003 ARHGEF1Q92888 912 aaKnown RBP21.36■■□□□ 1.01
AP3S2-216ENST00000617003 ZBTB1Q9Y2K1 713 aa21.36■■□□□ 1.01
AP3S2-216ENST00000617003 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
AP3S2-216ENST00000617003 A1BGP04217 495 aa21.34■■□□□ 1.01
AP3S2-216ENST00000617003 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
AP3S2-216ENST00000617003 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
AP3S2-216ENST00000617003 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
AP3S2-216ENST00000617003 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
AP3S2-216ENST00000617003 GIGYF1O75420 1035 aaPredicted RBP21.33■■□□□ 1.01
AP3S2-216ENST00000617003 ZNF853P0CG23 659 aa21.32■■□□□ 1
AP3S2-216ENST00000617003 ADRA2BP18089 450 aa21.32■■□□□ 1
AP3S2-216ENST00000617003 CALD1Q05682 793 aaKnown RBP21.32■■□□□ 1
AP3S2-216ENST00000617003 PTGER2P43116 358 aa21.31■■□□□ 1
AP3S2-216ENST00000617003 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
AP3S2-216ENST00000617003 RFC4P35249 363 aa21.31■■□□□ 1
AP3S2-216ENST00000617003 MSL1Q68DK7 614 aa21.31■■□□□ 1
AP3S2-216ENST00000617003 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
AP3S2-216ENST00000617003 IFT57Q9NWB7 429 aa21.31■■□□□ 1
AP3S2-216ENST00000617003 LRP5O75197 1615 aa21.3■■□□□ 1
AP3S2-216ENST00000617003 GNAI1P63096 354 aa21.3■■□□□ 1
AP3S2-216ENST00000617003 MBIPQ9NS73 344 aa21.3■■□□□ 1
AP3S2-216ENST00000617003 PIP4K2AP48426 406 aaPredicted RBP21.29■■□□□ 1
AP3S2-216ENST00000617003 EIF5P55010 431 aaKnown RBP21.29■■□□□ 1
AP3S2-216ENST00000617003 KRT24Q2M2I5 525 aa21.28■■□□□ 1
AP3S2-216ENST00000617003 SRP68Q9UHB9 627 aaKnown RBP21.27■■□□□ 1
AP3S2-216ENST00000617003 COL24A1Q17RW2 1714 aa21.27■■□□□ 1
AP3S2-216ENST00000617003 POLD1P28340 1107 aa21.27■□□□□ 0.99
AP3S2-216ENST00000617003 IL6STP40189 918 aaPredicted RBP21.27■□□□□ 0.99
AP3S2-216ENST00000617003 PPP1R1BQ9UD71 204 aaPredicted RBP21.27■□□□□ 0.99
AP3S2-216ENST00000617003 ZNF330Q9Y3S2 320 aaPredicted RBP21.27■□□□□ 0.99
AP3S2-216ENST00000617003 C4AP0C0L4 1744 aa21.26■□□□□ 0.99
AP3S2-216ENST00000617003 COL15A1P39059 1388 aa21.26■□□□□ 0.99
AP3S2-216ENST00000617003 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
AP3S2-216ENST00000617003 GYS1P13807 737 aa21.26■□□□□ 0.99
AP3S2-216ENST00000617003 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
AP3S2-216ENST00000617003 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
AP3S2-216ENST00000617003 EIF2S2P20042 333 aaKnown RBP21.25■□□□□ 0.99
AP3S2-216ENST00000617003 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
AP3S2-216ENST00000617003 NGEFQ8N5V2 710 aa21.25■□□□□ 0.99
AP3S2-216ENST00000617003 USP42Q9H9J4 1324 aaKnown RBP21.24■□□□□ 0.99
AP3S2-216ENST00000617003 ZPR1O75312 459 aa21.24■□□□□ 0.99
AP3S2-216ENST00000617003 ARXQ96QS3 562 aa21.24■□□□□ 0.99
AP3S2-216ENST00000617003 NARFQ9UHQ1 456 aa21.24■□□□□ 0.99
AP3S2-216ENST00000617003 LAMB4A4D0S4 1761 aa21.24■□□□□ 0.99
AP3S2-216ENST00000617003 IL16Q14005 1332 aa21.23■□□□□ 0.99
AP3S2-216ENST00000617003 A0A087WZG4 1122 aa21.23■□□□□ 0.99
AP3S2-216ENST00000617003 USPL1Q5W0Q7 1092 aa21.23■□□□□ 0.99
AP3S2-216ENST00000617003 NLGN1Q8N2Q7 840 aa21.23■□□□□ 0.99
AP3S2-216ENST00000617003 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
AP3S2-216ENST00000617003 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
AP3S2-216ENST00000617003 NECTIN2Q92692 538 aa21.22■□□□□ 0.99
AP3S2-216ENST00000617003 TSR2Q969E8 191 aaKnown RBP21.22■□□□□ 0.99
AP3S2-216ENST00000617003 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
AP3S2-216ENST00000617003 FKBP8Q14318 412 aa21.21■□□□□ 0.99
AP3S2-216ENST00000617003 DUSP27Q5VZP5 1158 aa21.21■□□□□ 0.99
AP3S2-216ENST00000617003 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
AP3S2-216ENST00000617003 BCL2L12Q9HB09 334 aa21.2■□□□□ 0.98
AP3S2-216ENST00000617003 MYL6BP14649 208 aa21.19■□□□□ 0.98
AP3S2-216ENST00000617003 SPINK5Q9NQ38 1064 aaPredicted RBP21.19■□□□□ 0.98
AP3S2-216ENST00000617003 MMP10P09238 476 aa21.19■□□□□ 0.98
AP3S2-216ENST00000617003 PDIA6Q15084 440 aa21.19■□□□□ 0.98
AP3S2-216ENST00000617003 DZIP3Q86Y13 1208 aaKnown RBP21.19■□□□□ 0.98
AP3S2-216ENST00000617003 ZNF521Q96K83 1311 aa21.18■□□□□ 0.98
AP3S2-216ENST00000617003 HOXB7P09629 217 aa21.18■□□□□ 0.98
AP3S2-216ENST00000617003 ERBB4Q15303 1308 aa21.17■□□□□ 0.98
AP3S2-216ENST00000617003 CAMTA2O94983 1202 aa21.17■□□□□ 0.98
AP3S2-216ENST00000617003 ANXA1P04083 346 aa21.17■□□□□ 0.98
AP3S2-216ENST00000617003 TM4SF1P30408 202 aa21.16■□□□□ 0.98
AP3S2-216ENST00000617003 PROSER3Q2NL68 480 aa21.16■□□□□ 0.98
AP3S2-216ENST00000617003 HDGFL1Q5TGJ6 251 aa21.16■□□□□ 0.98
AP3S2-216ENST00000617003 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
AP3S2-216ENST00000617003 FHDC1Q9C0D6 1143 aaPredicted RBP21.16■□□□□ 0.98
AP3S2-216ENST00000617003 TTLL7Q6ZT98 887 aa21.14■□□□□ 0.98
AP3S2-216ENST00000617003 KLHL34Q8N239 644 aa21.14■□□□□ 0.98
AP3S2-216ENST00000617003 SYT17Q9BSW7 474 aa21.14■□□□□ 0.98
AP3S2-216ENST00000617003 PARP3Q9Y6F1 533 aa21.14■□□□□ 0.98
AP3S2-216ENST00000617003 FANCIQ9NVI1 1328 aa21.14■□□□□ 0.97
AP3S2-216ENST00000617003 GOLGA2Q08379 1002 aa21.14■□□□□ 0.97
AP3S2-216ENST00000617003 NFIXQ14938 502 aa21.14■□□□□ 0.97
AP3S2-216ENST00000617003 LRP10Q7Z4F1 713 aa21.14■□□□□ 0.97
AP3S2-216ENST00000617003 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
AP3S2-216ENST00000617003 DDR1Q08345 913 aa21.13■□□□□ 0.97
AP3S2-216ENST00000617003 CHPF2Q9P2E5 772 aa21.13■□□□□ 0.97
AP3S2-216ENST00000617003 TBC1D9BQ66K14 1250 aa21.12■□□□□ 0.97
AP3S2-216ENST00000617003 BICDL1Q6ZP65 573 aa21.12■□□□□ 0.97
AP3S2-216ENST00000617003 EXOSC9Q06265 439 aaKnown RBP21.11■□□□□ 0.97
AP3S2-216ENST00000617003 HLFQ16534 295 aa21.11■□□□□ 0.97
AP3S2-216ENST00000617003 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
AP3S2-216ENST00000617003 MYH16Q9H6N6 1097 aa21.11■□□□□ 0.97
AP3S2-216ENST00000617003 DBF4Q9UBU7 674 aaPredicted RBP21.11■□□□□ 0.97
AP3S2-216ENST00000617003 POLRMTO00411 1230 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms