RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
UPK1A-203ENST00000616789 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
UPK1A-203ENST00000616789 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
UPK1A-203ENST00000616789 NEFMP07197 916 aa18.11■□□□□ 0.49
UPK1A-203ENST00000616789 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
UPK1A-203ENST00000616789 SRP68Q9UHB9 627 aaKnown RBP18.11■□□□□ 0.49
UPK1A-203ENST00000616789 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
UPK1A-203ENST00000616789 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
UPK1A-203ENST00000616789 RFC4P35249 363 aa18.1■□□□□ 0.49
UPK1A-203ENST00000616789 NLGN2Q8NFZ4 835 aa18.1■□□□□ 0.49
UPK1A-203ENST00000616789 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
UPK1A-203ENST00000616789 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
UPK1A-203ENST00000616789 NLGN1Q8N2Q7 840 aa18.09■□□□□ 0.49
UPK1A-203ENST00000616789 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
UPK1A-203ENST00000616789 STARD3NLO95772 234 aa18.08■□□□□ 0.49
UPK1A-203ENST00000616789 A1BGP04217 495 aa18.08■□□□□ 0.49
UPK1A-203ENST00000616789 FKBP8Q14318 412 aa18.08■□□□□ 0.49
UPK1A-203ENST00000616789 PNISRQ8TF01 805 aaKnown RBP18.08■□□□□ 0.49
UPK1A-203ENST00000616789 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.49
UPK1A-203ENST00000616789 KIF13BQ9NQT8 1826 aa18.08■□□□□ 0.48
UPK1A-203ENST00000616789 COL15A1P39059 1388 aa18.07■□□□□ 0.48
UPK1A-203ENST00000616789 MMP10P09238 476 aa18.07■□□□□ 0.48
UPK1A-203ENST00000616789 TM4SF1P30408 202 aa18.07■□□□□ 0.48
UPK1A-203ENST00000616789 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
UPK1A-203ENST00000616789 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
UPK1A-203ENST00000616789 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
UPK1A-203ENST00000616789 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
UPK1A-203ENST00000616789 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
UPK1A-203ENST00000616789 IL6STP40189 918 aaPredicted RBP18.05■□□□□ 0.48
UPK1A-203ENST00000616789 KIAA1551Q9HCM1 1747 aa18.05■□□□□ 0.48
UPK1A-203ENST00000616789 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
UPK1A-203ENST00000616789 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
UPK1A-203ENST00000616789 DDR1Q08345 913 aa18.04■□□□□ 0.48
UPK1A-203ENST00000616789 USPL1Q5W0Q7 1092 aa18.04■□□□□ 0.48
UPK1A-203ENST00000616789 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
UPK1A-203ENST00000616789 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
UPK1A-203ENST00000616789 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
UPK1A-203ENST00000616789 BABAM1Q9NWV8 329 aa18.04■□□□□ 0.48
UPK1A-203ENST00000616789 LAMB4A4D0S4 1761 aa18.03■□□□□ 0.48
UPK1A-203ENST00000616789 CHL1O00533 1208 aa18.03■□□□□ 0.48
UPK1A-203ENST00000616789 APAF1O14727 1248 aa18.03■□□□□ 0.48
UPK1A-203ENST00000616789 ANP32CO43423 234 aa18.03■□□□□ 0.48
UPK1A-203ENST00000616789 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
UPK1A-203ENST00000616789 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
UPK1A-203ENST00000616789 POLRMTO00411 1230 aaKnown RBP18.01■□□□□ 0.47
UPK1A-203ENST00000616789 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
UPK1A-203ENST00000616789 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
UPK1A-203ENST00000616789 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
UPK1A-203ENST00000616789 AFDNP55196 1824 aaKnown RBP18■□□□□ 0.47
UPK1A-203ENST00000616789 SCN7AQ01118 1682 aa18■□□□□ 0.47
UPK1A-203ENST00000616789 ZPR1O75312 459 aa18■□□□□ 0.47
UPK1A-203ENST00000616789 NFIXQ14938 502 aa18■□□□□ 0.47
UPK1A-203ENST00000616789 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
UPK1A-203ENST00000616789 CAMTA2O94983 1202 aa17.99■□□□□ 0.47
UPK1A-203ENST00000616789 ZNF853P0CG23 659 aa17.99■□□□□ 0.47
UPK1A-203ENST00000616789 YBX3P16989 372 aaKnown RBP eCLIP17.99■□□□□ 0.47
UPK1A-203ENST00000616789 LRP10Q7Z4F1 713 aa17.99■□□□□ 0.47
UPK1A-203ENST00000616789 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
UPK1A-203ENST00000616789 BCORQ6W2J9 1755 aa17.98■□□□□ 0.47
UPK1A-203ENST00000616789 A0A087WZG4 1122 aa17.98■□□□□ 0.47
UPK1A-203ENST00000616789 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
UPK1A-203ENST00000616789 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
UPK1A-203ENST00000616789 KCNA3P22001 575 aa17.97■□□□□ 0.47
UPK1A-203ENST00000616789 PDIA6Q15084 440 aa17.97■□□□□ 0.47
UPK1A-203ENST00000616789 N4BP2Q86UW6 1770 aaPredicted RBP17.97■□□□□ 0.47
UPK1A-203ENST00000616789 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
UPK1A-203ENST00000616789 BRCA1P38398 1863 aaKnown RBP17.96■□□□□ 0.47
UPK1A-203ENST00000616789 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
UPK1A-203ENST00000616789 TBC1D9BQ66K14 1250 aa17.96■□□□□ 0.47
UPK1A-203ENST00000616789 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
UPK1A-203ENST00000616789 TGFB2P61812 414 aa17.94■□□□□ 0.46
UPK1A-203ENST00000616789 DZIP3Q86Y13 1208 aaKnown RBP17.94■□□□□ 0.46
UPK1A-203ENST00000616789 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
UPK1A-203ENST00000616789 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
UPK1A-203ENST00000616789 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
UPK1A-203ENST00000616789 CHD4Q14839 1912 aa17.93■□□□□ 0.46
UPK1A-203ENST00000616789 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
UPK1A-203ENST00000616789 RGL2O15211 777 aa17.92■□□□□ 0.46
UPK1A-203ENST00000616789 SERPINB2P05120 415 aa17.92■□□□□ 0.46
UPK1A-203ENST00000616789 GPR162Q16538 588 aa17.92■□□□□ 0.46
UPK1A-203ENST00000616789 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
UPK1A-203ENST00000616789 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
UPK1A-203ENST00000616789 DPEP1P16444 411 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 ANKRD31Q8N7Z5 1873 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 HLFQ16534 295 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 TTLL7Q6ZT98 887 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
UPK1A-203ENST00000616789 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
UPK1A-203ENST00000616789 NUP98P52948 1817 aa17.9■□□□□ 0.46
UPK1A-203ENST00000616789 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
UPK1A-203ENST00000616789 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
UPK1A-203ENST00000616789 WWC1Q8IX03 1113 aa17.9■□□□□ 0.46
UPK1A-203ENST00000616789 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
UPK1A-203ENST00000616789 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
UPK1A-203ENST00000616789 MYL6BP14649 208 aa17.88■□□□□ 0.45
UPK1A-203ENST00000616789 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
UPK1A-203ENST00000616789 ANXA1P04083 346 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms