RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 RIPK4P57078 832 aa16.76■□□□□ 0.27
CSTF1-208ENST00000613138 SOS1Q07889 1333 aaPredicted RBP16.75■□□□□ 0.27
CSTF1-208ENST00000613138 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
CSTF1-208ENST00000613138 GYS1P13807 737 aa16.75■□□□□ 0.27
CSTF1-208ENST00000613138 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
CSTF1-208ENST00000613138 GOLGB1Q14789 3259 aaKnown RBP16.74■□□□□ 0.27
CSTF1-208ENST00000613138 A1BGP04217 495 aa16.74■□□□□ 0.27
CSTF1-208ENST00000613138 RFC4P35249 363 aa16.74■□□□□ 0.27
CSTF1-208ENST00000613138 TAF7Q15545 349 aaPredicted RBP16.74■□□□□ 0.27
CSTF1-208ENST00000613138 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
CSTF1-208ENST00000613138 FMNL2Q96PY5 1086 aa16.74■□□□□ 0.27
CSTF1-208ENST00000613138 UTRNP46939 3433 aa16.74■□□□□ 0.27
CSTF1-208ENST00000613138 MMP10P09238 476 aa16.73■□□□□ 0.27
CSTF1-208ENST00000613138 FKBP8Q14318 412 aa16.73■□□□□ 0.27
CSTF1-208ENST00000613138 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
CSTF1-208ENST00000613138 WWC3Q9ULE0 1092 aa16.73■□□□□ 0.27
CSTF1-208ENST00000613138 COL15A1P39059 1388 aa16.73■□□□□ 0.27
CSTF1-208ENST00000613138 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
CSTF1-208ENST00000613138 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
CSTF1-208ENST00000613138 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
CSTF1-208ENST00000613138 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
CSTF1-208ENST00000613138 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
CSTF1-208ENST00000613138 USP42Q9H9J4 1324 aaKnown RBP16.71■□□□□ 0.27
CSTF1-208ENST00000613138 ADRA2BP18089 450 aa16.71■□□□□ 0.27
CSTF1-208ENST00000613138 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
CSTF1-208ENST00000613138 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
CSTF1-208ENST00000613138 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
CSTF1-208ENST00000613138 ANP32CO43423 234 aa16.7■□□□□ 0.26
CSTF1-208ENST00000613138 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
CSTF1-208ENST00000613138 KIF13BQ9NQT8 1826 aa16.69■□□□□ 0.26
CSTF1-208ENST00000613138 APAF1O14727 1248 aa16.69■□□□□ 0.26
CSTF1-208ENST00000613138 STARD3NLO95772 234 aa16.69■□□□□ 0.26
CSTF1-208ENST00000613138 DDR1Q08345 913 aa16.69■□□□□ 0.26
CSTF1-208ENST00000613138 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
CSTF1-208ENST00000613138 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
CSTF1-208ENST00000613138 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
CSTF1-208ENST00000613138 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
CSTF1-208ENST00000613138 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
CSTF1-208ENST00000613138 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
CSTF1-208ENST00000613138 PELP1Q8IZL8 1130 aaKnown RBP16.68■□□□□ 0.26
CSTF1-208ENST00000613138 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
CSTF1-208ENST00000613138 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
CSTF1-208ENST00000613138 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
CSTF1-208ENST00000613138 BCORQ6W2J9 1755 aa16.67■□□□□ 0.26
CSTF1-208ENST00000613138 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
CSTF1-208ENST00000613138 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
CSTF1-208ENST00000613138 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
CSTF1-208ENST00000613138 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
CSTF1-208ENST00000613138 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
CSTF1-208ENST00000613138 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
CSTF1-208ENST00000613138 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
CSTF1-208ENST00000613138 ZPR1O75312 459 aa16.65■□□□□ 0.26
CSTF1-208ENST00000613138 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
CSTF1-208ENST00000613138 YBX3P16989 372 aaKnown RBP eCLIP16.65■□□□□ 0.26
CSTF1-208ENST00000613138 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
CSTF1-208ENST00000613138 TEX13AQ9BXU3 409 aaPredicted RBP16.65■□□□□ 0.26
CSTF1-208ENST00000613138 NFIXQ14938 502 aa16.64■□□□□ 0.25
CSTF1-208ENST00000613138 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
CSTF1-208ENST00000613138 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
CSTF1-208ENST00000613138 TM4SF1P30408 202 aa16.63■□□□□ 0.25
CSTF1-208ENST00000613138 IL6STP40189 918 aaPredicted RBP16.63■□□□□ 0.25
CSTF1-208ENST00000613138 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
CSTF1-208ENST00000613138 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
CSTF1-208ENST00000613138 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
CSTF1-208ENST00000613138 CHD4Q14839 1912 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 ANXA1P04083 346 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 GPR162Q16538 588 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
CSTF1-208ENST00000613138 BRCA1P38398 1863 aaKnown RBP16.62■□□□□ 0.25
CSTF1-208ENST00000613138 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
CSTF1-208ENST00000613138 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
CSTF1-208ENST00000613138 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
CSTF1-208ENST00000613138 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
CSTF1-208ENST00000613138 NUP98P52948 1817 aa16.61■□□□□ 0.25
CSTF1-208ENST00000613138 CHL1O00533 1208 aa16.6■□□□□ 0.25
CSTF1-208ENST00000613138 MYL6BP14649 208 aa16.6■□□□□ 0.25
CSTF1-208ENST00000613138 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
CSTF1-208ENST00000613138 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
CSTF1-208ENST00000613138 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
CSTF1-208ENST00000613138 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
CSTF1-208ENST00000613138 FAM9BQ8IZU0 186 aa16.59■□□□□ 0.25
CSTF1-208ENST00000613138 A0A087WZG4 1122 aa16.58■□□□□ 0.24
CSTF1-208ENST00000613138 DPEP1P16444 411 aa16.58■□□□□ 0.24
CSTF1-208ENST00000613138 CHRNA5P30532 468 aa16.58■□□□□ 0.24
CSTF1-208ENST00000613138 HLFQ16534 295 aa16.58■□□□□ 0.24
CSTF1-208ENST00000613138 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.24
CSTF1-208ENST00000613138 MBIPQ9NS73 344 aa16.58■□□□□ 0.24
CSTF1-208ENST00000613138 SERPINB2P05120 415 aa16.57■□□□□ 0.24
CSTF1-208ENST00000613138 PDIA6Q15084 440 aa16.57■□□□□ 0.24
CSTF1-208ENST00000613138 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
CSTF1-208ENST00000613138 KCNA3P22001 575 aa16.56■□□□□ 0.24
CSTF1-208ENST00000613138 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
CSTF1-208ENST00000613138 CACNA1SQ13698 1873 aa16.55■□□□□ 0.24
CSTF1-208ENST00000613138 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
CSTF1-208ENST00000613138 FAM177BA6PVY3 158 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms