RNA–Protein interactions for RNA: ENST00000612787.1

TRBV7-9-201, Transcript of T cell receptor beta variable 7-9, humanhuman

APPRIS P1 BASIC

Gene TRBV7-9, Length 347 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9-201ENST00000612787 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
TRBV7-9-201ENST00000612787 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
TRBV7-9-201ENST00000612787 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
TRBV7-9-201ENST00000612787 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 TJP1Q07157 1748 aa12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.33
TRBV7-9-201ENST00000612787 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 GYS1P13807 737 aa12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 EIF4A1P60842 406 aaKnown RBP12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 FHDC1Q9C0D6 1143 aaPredicted RBP12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
TRBV7-9-201ENST00000612787 CHL1O00533 1208 aa12.94□□□□□ -0.34
TRBV7-9-201ENST00000612787 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
TRBV7-9-201ENST00000612787 RFC4P35249 363 aa12.94□□□□□ -0.34
TRBV7-9-201ENST00000612787 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
TRBV7-9-201ENST00000612787 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
TRBV7-9-201ENST00000612787 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
TRBV7-9-201ENST00000612787 APAF1O14727 1248 aa12.93□□□□□ -0.34
TRBV7-9-201ENST00000612787 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
TRBV7-9-201ENST00000612787 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
TRBV7-9-201ENST00000612787 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
TRBV7-9-201ENST00000612787 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
TRBV7-9-201ENST00000612787 CD2APQ9Y5K6 639 aa12.92□□□□□ -0.34
TRBV7-9-201ENST00000612787 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 A1BGP04217 495 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 MMP10P09238 476 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 TM4SF1P30408 202 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 COL15A1P39059 1388 aa12.91□□□□□ -0.34
TRBV7-9-201ENST00000612787 A0A087WZG4 1122 aa12.9□□□□□ -0.34
TRBV7-9-201ENST00000612787 RGL2O15211 777 aa12.9□□□□□ -0.34
TRBV7-9-201ENST00000612787 FKBP8Q14318 412 aa12.9□□□□□ -0.34
TRBV7-9-201ENST00000612787 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
TRBV7-9-201ENST00000612787 TSPYL4Q9UJ04 414 aa12.9□□□□□ -0.34
TRBV7-9-201ENST00000612787 ZPR1O75312 459 aa12.89□□□□□ -0.35
TRBV7-9-201ENST00000612787 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
TRBV7-9-201ENST00000612787 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
TRBV7-9-201ENST00000612787 DDR1Q08345 913 aa12.88□□□□□ -0.35
TRBV7-9-201ENST00000612787 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
TRBV7-9-201ENST00000612787 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
TRBV7-9-201ENST00000612787 CALD1Q05682 793 aaKnown RBP12.87□□□□□ -0.35
TRBV7-9-201ENST00000612787 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
TRBV7-9-201ENST00000612787 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
TRBV7-9-201ENST00000612787 IFT57Q9NWB7 429 aa12.87□□□□□ -0.35
TRBV7-9-201ENST00000612787 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
TRBV7-9-201ENST00000612787 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
TRBV7-9-201ENST00000612787 NFIXQ14938 502 aa12.86□□□□□ -0.35
TRBV7-9-201ENST00000612787 PDIA6Q15084 440 aa12.86□□□□□ -0.35
TRBV7-9-201ENST00000612787 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
TRBV7-9-201ENST00000612787 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
TRBV7-9-201ENST00000612787 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
TRBV7-9-201ENST00000612787 HOXB7P09629 217 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 C4AP0C0L4 1744 aa12.85□□□□□ -0.35
TRBV7-9-201ENST00000612787 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
TRBV7-9-201ENST00000612787 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
TRBV7-9-201ENST00000612787 TGFB2P61812 414 aa12.84□□□□□ -0.35
TRBV7-9-201ENST00000612787 GNAI1P63096 354 aa12.84□□□□□ -0.35
TRBV7-9-201ENST00000612787 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
TRBV7-9-201ENST00000612787 IL16Q14005 1332 aa12.84□□□□□ -0.35
TRBV7-9-201ENST00000612787 ERVV-1B6SEH8 477 aa12.83□□□□□ -0.36
TRBV7-9-201ENST00000612787 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
TRBV7-9-201ENST00000612787 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
TRBV7-9-201ENST00000612787 WDR63Q8IWG1 891 aa12.82□□□□□ -0.36
TRBV7-9-201ENST00000612787 SERPINB2P05120 415 aa12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 KCNA3P22001 575 aa12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 FAM9BQ8IZU0 186 aa12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
TRBV7-9-201ENST00000612787 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
TRBV7-9-201ENST00000612787 HLFQ16534 295 aa12.8□□□□□ -0.36
TRBV7-9-201ENST00000612787 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
TRBV7-9-201ENST00000612787 DUSP27Q5VZP5 1158 aa12.8□□□□□ -0.36
TRBV7-9-201ENST00000612787 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRBV7-9-201ENST00000612787 MAP3K15Q6ZN16 1313 aa12.8□□□□□ -0.36
TRBV7-9-201ENST00000612787 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRBV7-9-201ENST00000612787 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
TRBV7-9-201ENST00000612787 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
TRBV7-9-201ENST00000612787 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms