RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 TEFQ10587 303 aa11.53□□□□□ -0.56
SNCA-212ENST00000611107 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
SNCA-212ENST00000611107 USP16Q9Y5T5 823 aa11.53□□□□□ -0.56
SNCA-212ENST00000611107 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
SNCA-212ENST00000611107 BTBD11A6QL63 1104 aa11.52□□□□□ -0.57
SNCA-212ENST00000611107 ANP32CO43423 234 aa11.52□□□□□ -0.57
SNCA-212ENST00000611107 RRP7AQ9Y3A4 280 aaKnown RBP11.52□□□□□ -0.57
SNCA-212ENST00000611107 BRCA1P38398 1863 aaKnown RBP11.52□□□□□ -0.57
SNCA-212ENST00000611107 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
SNCA-212ENST00000611107 NFE2L2Q16236 605 aa11.51□□□□□ -0.57
SNCA-212ENST00000611107 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
SNCA-212ENST00000611107 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
SNCA-212ENST00000611107 LAMB4A4D0S4 1761 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 SENP3-EIF4A1A0A087X0R7 540 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 ADRA2BP18089 450 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 TM4SF1P30408 202 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 RFC4P35249 363 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 EIF5P55010 431 aaKnown RBP11.5□□□□□ -0.57
SNCA-212ENST00000611107 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
SNCA-212ENST00000611107 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 COL15A1P39059 1388 aa11.5□□□□□ -0.57
SNCA-212ENST00000611107 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
SNCA-212ENST00000611107 TTC5Q8N0Z6 440 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 C10orf71Q711Q0 1435 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 BCORQ6W2J9 1755 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 ANKRD31Q8N7Z5 1873 aa11.49□□□□□ -0.57
SNCA-212ENST00000611107 A0A0G2JLW4 131 aa11.48□□□□□ -0.57
SNCA-212ENST00000611107 POLRMTO00411 1230 aaKnown RBP11.48□□□□□ -0.57
SNCA-212ENST00000611107 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
SNCA-212ENST00000611107 YY1P25490 414 aa11.48□□□□□ -0.57
SNCA-212ENST00000611107 TMPOP42166 694 aaKnown RBP11.48□□□□□ -0.57
SNCA-212ENST00000611107 NFIXQ14938 502 aa11.48□□□□□ -0.57
SNCA-212ENST00000611107 GPR162Q16538 588 aa11.48□□□□□ -0.57
SNCA-212ENST00000611107 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
SNCA-212ENST00000611107 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
SNCA-212ENST00000611107 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
SNCA-212ENST00000611107 KCNA3P22001 575 aa11.47□□□□□ -0.57
SNCA-212ENST00000611107 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
SNCA-212ENST00000611107 NLGN1Q8N2Q7 840 aa11.47□□□□□ -0.57
SNCA-212ENST00000611107 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
SNCA-212ENST00000611107 NARFQ9UHQ1 456 aa11.47□□□□□ -0.57
SNCA-212ENST00000611107 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
SNCA-212ENST00000611107 DPEP1P16444 411 aa11.46□□□□□ -0.57
SNCA-212ENST00000611107 RIPK4P57078 832 aa11.46□□□□□ -0.57
SNCA-212ENST00000611107 NEUROD2Q15784 382 aa11.46□□□□□ -0.57
SNCA-212ENST00000611107 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
SNCA-212ENST00000611107 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
SNCA-212ENST00000611107 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
SNCA-212ENST00000611107 EIF4A1P60842 406 aaKnown RBP11.45□□□□□ -0.58
SNCA-212ENST00000611107 TBC1D9BQ66K14 1250 aa11.45□□□□□ -0.58
SNCA-212ENST00000611107 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
SNCA-212ENST00000611107 BICDL1Q6ZP65 573 aa11.45□□□□□ -0.58
SNCA-212ENST00000611107 ZNF330Q9Y3S2 320 aaPredicted RBP11.45□□□□□ -0.58
SNCA-212ENST00000611107 COL11A2P13942 1736 aaPredicted RBP11.44□□□□□ -0.58
SNCA-212ENST00000611107 STARD3NLO95772 234 aa11.44□□□□□ -0.58
SNCA-212ENST00000611107 CHRNA5P30532 468 aa11.44□□□□□ -0.58
SNCA-212ENST00000611107 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
SNCA-212ENST00000611107 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
SNCA-212ENST00000611107 ZPR1O75312 459 aa11.43□□□□□ -0.58
SNCA-212ENST00000611107 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
SNCA-212ENST00000611107 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
SNCA-212ENST00000611107 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
SNCA-212ENST00000611107 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNCA-212ENST00000611107 RUNDC1Q96C34 613 aa11.43□□□□□ -0.58
SNCA-212ENST00000611107 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
SNCA-212ENST00000611107 NUP98P52948 1817 aa11.43□□□□□ -0.58
SNCA-212ENST00000611107 DLEC1Q9Y238 1755 aa11.43□□□□□ -0.58
SNCA-212ENST00000611107 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
SNCA-212ENST00000611107 ANXA1P04083 346 aa11.42□□□□□ -0.58
SNCA-212ENST00000611107 SERPINB2P05120 415 aa11.42□□□□□ -0.58
SNCA-212ENST00000611107 IL6STP40189 918 aaPredicted RBP11.42□□□□□ -0.58
SNCA-212ENST00000611107 HLFQ16534 295 aa11.42□□□□□ -0.58
SNCA-212ENST00000611107 PROSER3Q2NL68 480 aa11.42□□□□□ -0.58
SNCA-212ENST00000611107 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
SNCA-212ENST00000611107 ZNF784Q8NCA9 323 aaPredicted RBP11.42□□□□□ -0.58
SNCA-212ENST00000611107 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
SNCA-212ENST00000611107 APAF1O14727 1248 aa11.41□□□□□ -0.58
SNCA-212ENST00000611107 PDIA6Q15084 440 aa11.41□□□□□ -0.58
SNCA-212ENST00000611107 TTLL7Q6ZT98 887 aa11.41□□□□□ -0.58
SNCA-212ENST00000611107 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
SNCA-212ENST00000611107 PNISRQ8TF01 805 aaKnown RBP11.41□□□□□ -0.58
SNCA-212ENST00000611107 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
SNCA-212ENST00000611107 SBF1O95248 1867 aa11.4□□□□□ -0.58
SNCA-212ENST00000611107 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
SNCA-212ENST00000611107 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
SNCA-212ENST00000611107 DCAF8L1A6NGE4 600 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 CHL1O00533 1208 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 PRELPP51888 382 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 TGFB2P61812 414 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 CCDC88AQ3V6T2 1871 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 BCS1LQ9Y276 419 aa11.39□□□□□ -0.59
SNCA-212ENST00000611107 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms