RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
LINC01396-201ENST00000609099 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
LINC01396-201ENST00000609099 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
LINC01396-201ENST00000609099 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
LINC01396-201ENST00000609099 TMF1P82094 1093 aa11.73□□□□□ -0.53
LINC01396-201ENST00000609099 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
LINC01396-201ENST00000609099 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
LINC01396-201ENST00000609099 A0A0C4DFX4 3053 aa11.73□□□□□ -0.53
LINC01396-201ENST00000609099 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
LINC01396-201ENST00000609099 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
LINC01396-201ENST00000609099 LMNB1P20700 586 aa11.71□□□□□ -0.53
LINC01396-201ENST00000609099 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.53
LINC01396-201ENST00000609099 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
LINC01396-201ENST00000609099 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.53
LINC01396-201ENST00000609099 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.54
LINC01396-201ENST00000609099 TJP1Q07157 1748 aa11.71□□□□□ -0.54
LINC01396-201ENST00000609099 PCDH11XQ9BZA7 1347 aa11.7□□□□□ -0.54
LINC01396-201ENST00000609099 PCDH11YQ9BZA8 1340 aa11.7□□□□□ -0.54
LINC01396-201ENST00000609099 FKBP8Q14318 412 aa11.7□□□□□ -0.54
LINC01396-201ENST00000609099 DEFB115Q30KQ5 88 aa11.7□□□□□ -0.54
LINC01396-201ENST00000609099 ATG3Q9NT62 314 aa11.7□□□□□ -0.54
LINC01396-201ENST00000609099 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
LINC01396-201ENST00000609099 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
LINC01396-201ENST00000609099 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
LINC01396-201ENST00000609099 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
LINC01396-201ENST00000609099 NKX1-1Q15270 411 aaPredicted RBP11.69□□□□□ -0.54
LINC01396-201ENST00000609099 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
LINC01396-201ENST00000609099 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
LINC01396-201ENST00000609099 HTTP42858 3142 aa11.68□□□□□ -0.54
LINC01396-201ENST00000609099 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
LINC01396-201ENST00000609099 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
LINC01396-201ENST00000609099 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
LINC01396-201ENST00000609099 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
LINC01396-201ENST00000609099 MCOLN1Q9GZU1 580 aa11.67□□□□□ -0.54
LINC01396-201ENST00000609099 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
LINC01396-201ENST00000609099 WDR33Q9C0J8 1336 aaKnown RBP11.66□□□□□ -0.54
LINC01396-201ENST00000609099 BRCA2P51587 3418 aa11.66□□□□□ -0.54
LINC01396-201ENST00000609099 HSP90AB2PQ58FF8 381 aa11.65□□□□□ -0.54
LINC01396-201ENST00000609099 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
LINC01396-201ENST00000609099 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
LINC01396-201ENST00000609099 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
LINC01396-201ENST00000609099 USP42Q9H9J4 1324 aaKnown RBP11.64□□□□□ -0.55
LINC01396-201ENST00000609099 RASSF10A6NK89 507 aa11.64□□□□□ -0.55
LINC01396-201ENST00000609099 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
LINC01396-201ENST00000609099 TM4SF1P30408 202 aa11.64□□□□□ -0.55
LINC01396-201ENST00000609099 FMR1Q06787 632 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01396-201ENST00000609099 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 RPS6KA4O75676 772 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 GABBR2O75899 941 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 DDNO94850 711 aaPredicted RBP11.63□□□□□ -0.55
LINC01396-201ENST00000609099 RFC4P35249 363 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 DGKZQ13574 1117 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 LDHDQ86WU2 507 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 ABT1Q9ULW3 272 aaKnown RBP11.63□□□□□ -0.55
LINC01396-201ENST00000609099 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
LINC01396-201ENST00000609099 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
LINC01396-201ENST00000609099 ECE1P42892 770 aa11.62□□□□□ -0.55
LINC01396-201ENST00000609099 AMPHP49418 695 aa11.62□□□□□ -0.55
LINC01396-201ENST00000609099 INSRP06213 1382 aa11.62□□□□□ -0.55
LINC01396-201ENST00000609099 SCN4AP35499 1836 aa11.62□□□□□ -0.55
LINC01396-201ENST00000609099 CENPFP49454 3210 aa11.61□□□□□ -0.55
LINC01396-201ENST00000609099 SLX4Q8IY92 1834 aa11.61□□□□□ -0.55
LINC01396-201ENST00000609099 CA12O43570 354 aa11.61□□□□□ -0.55
LINC01396-201ENST00000609099 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
LINC01396-201ENST00000609099 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
LINC01396-201ENST00000609099 COL6A3P12111 3177 aa11.61□□□□□ -0.55
LINC01396-201ENST00000609099 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
LINC01396-201ENST00000609099 RANBP2P49792 3224 aaKnown RBP11.59□□□□□ -0.55
LINC01396-201ENST00000609099 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 PHKG2P15735 406 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 NBPF15Q8N660 670 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 GPR101Q96P66 508 aaPredicted RBP11.59□□□□□ -0.55
LINC01396-201ENST00000609099 TAF1DQ9H5J8 278 aaPredicted RBP11.59□□□□□ -0.55
LINC01396-201ENST00000609099 TMOD3Q9NYL9 352 aa11.59□□□□□ -0.55
LINC01396-201ENST00000609099 CUL9Q8IWT3 2517 aa11.58□□□□□ -0.56
LINC01396-201ENST00000609099 COL4A5P29400 1685 aa11.58□□□□□ -0.56
LINC01396-201ENST00000609099 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 ARFGEF2Q9Y6D5 1785 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 CRKLP46109 303 aaKnown RBP11.57□□□□□ -0.56
LINC01396-201ENST00000609099 SOX10P56693 466 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 GRM1Q13255 1194 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 NFIXQ14938 502 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
LINC01396-201ENST00000609099 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
LINC01396-201ENST00000609099 CAPNS2Q96L46 248 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 SMG6Q86US8 1419 aaKnown RBP11.57□□□□□ -0.56
LINC01396-201ENST00000609099 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
LINC01396-201ENST00000609099 ROCK2O75116 1388 aaKnown RBP11.56□□□□□ -0.56
LINC01396-201ENST00000609099 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
LINC01396-201ENST00000609099 DLL1O00548 723 aa11.56□□□□□ -0.56
LINC01396-201ENST00000609099 AOC2O75106 756 aa11.56□□□□□ -0.56
LINC01396-201ENST00000609099 EAPPQ56P03 285 aaPredicted RBP11.56□□□□□ -0.56
LINC01396-201ENST00000609099 HDGFL2Q7Z4V5 671 aaPredicted RBP11.56□□□□□ -0.56
LINC01396-201ENST00000609099 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
LINC01396-201ENST00000609099 FYB1O15117 783 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms