RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ANP32EQ9BTT0 268 aa13.79□□□□□ -0.2
LINC01001-203ENST00000607448 KCNQ3O43525 872 aa13.78□□□□□ -0.2
LINC01001-203ENST00000607448 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
LINC01001-203ENST00000607448 TEFQ10587 303 aa13.78□□□□□ -0.2
LINC01001-203ENST00000607448 ZNF496Q96IT1 587 aaPredicted RBP13.78□□□□□ -0.2
LINC01001-203ENST00000607448 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
LINC01001-203ENST00000607448 FANCIQ9NVI1 1328 aa13.77□□□□□ -0.2
LINC01001-203ENST00000607448 AFDNP55196 1824 aaKnown RBP13.77□□□□□ -0.2
LINC01001-203ENST00000607448 GYS1P13807 737 aa13.77□□□□□ -0.21
LINC01001-203ENST00000607448 ZNF790Q6PG37 636 aa13.77□□□□□ -0.21
LINC01001-203ENST00000607448 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
LINC01001-203ENST00000607448 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
LINC01001-203ENST00000607448 ZBTB1Q9Y2K1 713 aa13.76□□□□□ -0.21
LINC01001-203ENST00000607448 MMP10P09238 476 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 ADRA2BP18089 450 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 RFC4P35249 363 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 CCDC87Q9NVE4 849 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
LINC01001-203ENST00000607448 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
LINC01001-203ENST00000607448 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
LINC01001-203ENST00000607448 BCORQ6W2J9 1755 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC01001-203ENST00000607448 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 COL15A1P39059 1388 aa13.74□□□□□ -0.21
LINC01001-203ENST00000607448 YY1P25490 414 aa13.73□□□□□ -0.21
LINC01001-203ENST00000607448 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
LINC01001-203ENST00000607448 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
LINC01001-203ENST00000607448 NRXN2Q9P2S2 1712 aa13.73□□□□□ -0.21
LINC01001-203ENST00000607448 GPR162Q16538 588 aa13.72□□□□□ -0.21
LINC01001-203ENST00000607448 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
LINC01001-203ENST00000607448 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
LINC01001-203ENST00000607448 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
LINC01001-203ENST00000607448 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
LINC01001-203ENST00000607448 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.21
LINC01001-203ENST00000607448 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.21
LINC01001-203ENST00000607448 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.21
LINC01001-203ENST00000607448 HTATSF1O43719 755 aaKnown RBP13.71□□□□□ -0.22
LINC01001-203ENST00000607448 DDR1Q08345 913 aa13.71□□□□□ -0.22
LINC01001-203ENST00000607448 NFE2L2Q16236 605 aa13.71□□□□□ -0.22
LINC01001-203ENST00000607448 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.22
LINC01001-203ENST00000607448 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.22
LINC01001-203ENST00000607448 PIP4K2AP48426 406 aaPredicted RBP13.7□□□□□ -0.22
LINC01001-203ENST00000607448 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
LINC01001-203ENST00000607448 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
LINC01001-203ENST00000607448 A1BGP04217 495 aa13.69□□□□□ -0.22
LINC01001-203ENST00000607448 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
LINC01001-203ENST00000607448 MAPK8IP3Q9UPT6 1336 aa13.69□□□□□ -0.22
LINC01001-203ENST00000607448 ANKRD31Q8N7Z5 1873 aa13.68□□□□□ -0.22
LINC01001-203ENST00000607448 STARD3NLO95772 234 aa13.68□□□□□ -0.22
LINC01001-203ENST00000607448 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
LINC01001-203ENST00000607448 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
LINC01001-203ENST00000607448 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
LINC01001-203ENST00000607448 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
LINC01001-203ENST00000607448 ZPR1O75312 459 aa13.67□□□□□ -0.22
LINC01001-203ENST00000607448 NEFMP07197 916 aa13.67□□□□□ -0.22
LINC01001-203ENST00000607448 TM4SF1P30408 202 aa13.67□□□□□ -0.22
LINC01001-203ENST00000607448 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
LINC01001-203ENST00000607448 ZNF330Q9Y3S2 320 aaPredicted RBP13.67□□□□□ -0.22
LINC01001-203ENST00000607448 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
LINC01001-203ENST00000607448 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
LINC01001-203ENST00000607448 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
LINC01001-203ENST00000607448 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
LINC01001-203ENST00000607448 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
LINC01001-203ENST00000607448 NFIXQ14938 502 aa13.66□□□□□ -0.22
LINC01001-203ENST00000607448 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
LINC01001-203ENST00000607448 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
LINC01001-203ENST00000607448 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
LINC01001-203ENST00000607448 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
LINC01001-203ENST00000607448 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
LINC01001-203ENST00000607448 RIPK4P57078 832 aa13.65□□□□□ -0.22
LINC01001-203ENST00000607448 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
LINC01001-203ENST00000607448 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
LINC01001-203ENST00000607448 NUP98P52948 1817 aa13.64□□□□□ -0.23
LINC01001-203ENST00000607448 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
LINC01001-203ENST00000607448 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
LINC01001-203ENST00000607448 IL6STP40189 918 aaPredicted RBP13.64□□□□□ -0.23
LINC01001-203ENST00000607448 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
LINC01001-203ENST00000607448 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
LINC01001-203ENST00000607448 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
LINC01001-203ENST00000607448 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
LINC01001-203ENST00000607448 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
LINC01001-203ENST00000607448 DPEP1P16444 411 aa13.63□□□□□ -0.23
LINC01001-203ENST00000607448 KCNA3P22001 575 aa13.63□□□□□ -0.23
LINC01001-203ENST00000607448 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
LINC01001-203ENST00000607448 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
LINC01001-203ENST00000607448 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
LINC01001-203ENST00000607448 TGFB2P61812 414 aa13.62□□□□□ -0.23
LINC01001-203ENST00000607448 WDR43Q15061 677 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC01001-203ENST00000607448 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
LINC01001-203ENST00000607448 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
LINC01001-203ENST00000607448 GRIN3BO60391 1043 aa13.62□□□□□ -0.23
LINC01001-203ENST00000607448 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
LINC01001-203ENST00000607448 CHRNA5P30532 468 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms