RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 PDGFDQ9GZP0 370 aaPredicted RBP20.89■□□□□ 0.93
PPFIA3-213ENST00000602905 MTFR1LQ9H019 292 aa20.89■□□□□ 0.93
PPFIA3-213ENST00000602905 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-213ENST00000602905 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
PPFIA3-213ENST00000602905 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
PPFIA3-213ENST00000602905 CFAP44Q96MT7 982 aa20.87■□□□□ 0.93
PPFIA3-213ENST00000602905 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 CHL1O00533 1208 aa20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 GNAI1P63096 354 aa20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 INTS5Q6P9B9 1019 aaKnown RBP20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 ATF5Q9Y2D1 282 aaPredicted RBP20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 SALL2Q9Y467 1007 aaPredicted RBP20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 LRP5O75197 1615 aa20.86■□□□□ 0.93
PPFIA3-213ENST00000602905 RFC4P35249 363 aa20.85■□□□□ 0.93
PPFIA3-213ENST00000602905 IFT57Q9NWB7 429 aa20.85■□□□□ 0.93
PPFIA3-213ENST00000602905 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
PPFIA3-213ENST00000602905 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
PPFIA3-213ENST00000602905 WWC1Q8IX03 1113 aa20.84■□□□□ 0.93
PPFIA3-213ENST00000602905 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
PPFIA3-213ENST00000602905 GIGYF1O75420 1035 aaPredicted RBP20.83■□□□□ 0.93
PPFIA3-213ENST00000602905 POLD1P28340 1107 aa20.83■□□□□ 0.93
PPFIA3-213ENST00000602905 SMIM5Q71RC9 77 aa20.83■□□□□ 0.93
PPFIA3-213ENST00000602905 AMIGO3Q86WK7 504 aa20.83■□□□□ 0.93
PPFIA3-213ENST00000602905 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.93
PPFIA3-213ENST00000602905 USP16Q9Y5T5 823 aa20.83■□□□□ 0.93
PPFIA3-213ENST00000602905 ARHGEF1Q92888 912 aaKnown RBP20.82■□□□□ 0.92
PPFIA3-213ENST00000602905 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
PPFIA3-213ENST00000602905 A0A087WZG4 1122 aa20.81■□□□□ 0.92
PPFIA3-213ENST00000602905 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
PPFIA3-213ENST00000602905 ZNF330Q9Y3S2 320 aaPredicted RBP20.81■□□□□ 0.92
PPFIA3-213ENST00000602905 ZPR1O75312 459 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 A1BGP04217 495 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 ZNF853P0CG23 659 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 IL6STP40189 918 aaPredicted RBP20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 WDR63Q8IWG1 891 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 MBIPQ9NS73 344 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 C4AP0C0L4 1744 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 COL15A1P39059 1388 aa20.8■□□□□ 0.92
PPFIA3-213ENST00000602905 IL16Q14005 1332 aa20.79■□□□□ 0.92
PPFIA3-213ENST00000602905 MSL1Q68DK7 614 aa20.78■□□□□ 0.92
PPFIA3-213ENST00000602905 ARXQ96QS3 562 aa20.78■□□□□ 0.92
PPFIA3-213ENST00000602905 EIF2S2P20042 333 aaKnown RBP20.77■□□□□ 0.92
PPFIA3-213ENST00000602905 EIF5P55010 431 aaKnown RBP20.77■□□□□ 0.92
PPFIA3-213ENST00000602905 NLGN1Q8N2Q7 840 aa20.77■□□□□ 0.92
PPFIA3-213ENST00000602905 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
PPFIA3-213ENST00000602905 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
PPFIA3-213ENST00000602905 USP42Q9H9J4 1324 aaKnown RBP20.76■□□□□ 0.91
PPFIA3-213ENST00000602905 HOXB7P09629 217 aa20.75■□□□□ 0.91
PPFIA3-213ENST00000602905 PTGER2P43116 358 aa20.75■□□□□ 0.91
PPFIA3-213ENST00000602905 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
PPFIA3-213ENST00000602905 NARFQ9UHQ1 456 aa20.75■□□□□ 0.91
PPFIA3-213ENST00000602905 GYS1P13807 737 aa20.73■□□□□ 0.91
PPFIA3-213ENST00000602905 PIP4K2AP48426 406 aaPredicted RBP20.73■□□□□ 0.91
PPFIA3-213ENST00000602905 DUSP27Q5VZP5 1158 aa20.73■□□□□ 0.91
PPFIA3-213ENST00000602905 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
PPFIA3-213ENST00000602905 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
PPFIA3-213ENST00000602905 SRP68Q9UHB9 627 aaKnown RBP20.73■□□□□ 0.91
PPFIA3-213ENST00000602905 KRT24Q2M2I5 525 aa20.72■□□□□ 0.91
PPFIA3-213ENST00000602905 DZIP3Q86Y13 1208 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-213ENST00000602905 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-213ENST00000602905 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
PPFIA3-213ENST00000602905 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
PPFIA3-213ENST00000602905 NBPF26B4DH59 902 aa20.71■□□□□ 0.91
PPFIA3-213ENST00000602905 MYL6BP14649 208 aa20.71■□□□□ 0.91
PPFIA3-213ENST00000602905 HDGFL1Q5TGJ6 251 aa20.71■□□□□ 0.91
PPFIA3-213ENST00000602905 NBPF10Q6P3W6 841 aaKnown RBP20.71■□□□□ 0.91
PPFIA3-213ENST00000602905 NBPF15Q8N660 670 aa20.71■□□□□ 0.91
PPFIA3-213ENST00000602905 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
PPFIA3-213ENST00000602905 GOLGA2Q08379 1002 aa20.7■□□□□ 0.9
PPFIA3-213ENST00000602905 ELL2O00472 640 aaPredicted RBP20.69■□□□□ 0.9
PPFIA3-213ENST00000602905 MMP10P09238 476 aa20.69■□□□□ 0.9
PPFIA3-213ENST00000602905 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
PPFIA3-213ENST00000602905 KLHL34Q8N239 644 aa20.69■□□□□ 0.9
PPFIA3-213ENST00000602905 PARP3Q9Y6F1 533 aa20.69■□□□□ 0.9
PPFIA3-213ENST00000602905 FKBP8Q14318 412 aa20.68■□□□□ 0.9
PPFIA3-213ENST00000602905 ZNF652Q9Y2D9 606 aa20.68■□□□□ 0.9
PPFIA3-213ENST00000602905 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
PPFIA3-213ENST00000602905 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
PPFIA3-213ENST00000602905 C8orf58Q8NAV2 365 aa20.67■□□□□ 0.9
PPFIA3-213ENST00000602905 DDX21Q9NR30 783 aaKnown RBP eCLIP20.67■□□□□ 0.9
PPFIA3-213ENST00000602905 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
PPFIA3-213ENST00000602905 ZNF521Q96K83 1311 aa20.67■□□□□ 0.9
PPFIA3-213ENST00000602905 BCORQ6W2J9 1755 aa20.67■□□□□ 0.9
PPFIA3-213ENST00000602905 SRCAPQ6ZRS2 3230 aa20.66■□□□□ 0.9
PPFIA3-213ENST00000602905 E9PSI1 815 aa20.65■□□□□ 0.9
PPFIA3-213ENST00000602905 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
PPFIA3-213ENST00000602905 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
PPFIA3-213ENST00000602905 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
PPFIA3-213ENST00000602905 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
PPFIA3-213ENST00000602905 RGL2O15211 777 aa20.64■□□□□ 0.89
PPFIA3-213ENST00000602905 FHDC1Q9C0D6 1143 aaPredicted RBP20.64■□□□□ 0.89
PPFIA3-213ENST00000602905 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
PPFIA3-213ENST00000602905 CHPF2Q9P2E5 772 aa20.64■□□□□ 0.89
PPFIA3-213ENST00000602905 PDIA6Q15084 440 aa20.63■□□□□ 0.89
PPFIA3-213ENST00000602905 BICDL1Q6ZP65 573 aa20.63■□□□□ 0.89
PPFIA3-213ENST00000602905 TSPYL6Q8N831 410 aa20.63■□□□□ 0.89
PPFIA3-213ENST00000602905 BCL2L12Q9HB09 334 aa20.63■□□□□ 0.89
PPFIA3-213ENST00000602905 CACNA1FO60840 1977 aa20.63■□□□□ 0.89
PPFIA3-213ENST00000602905 NUP98P52948 1817 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 MAP3K15Q6ZN16 1313 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms